; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017565 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017565
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32 family B protein
Genome locationscaffold4:42998535..42998894
RNA-Seq ExpressionSpg017565
SyntenySpg017565
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036245.1 hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-5389.52Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE   LQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
XP_022930901.1 uncharacterized protein LOC111437254 isoform X1 [Cucurbita moschata]4.4e-5389.52Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        +RKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
XP_022930902.1 uncharacterized protein LOC111437254 isoform X2 [Cucurbita moschata]4.4e-5389.52Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        +RKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
XP_022996266.1 uncharacterized protein LOC111491544 [Cucurbita maxima]1.3e-5288.71Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKIN KSKKGKK+     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
XP_023532570.1 uncharacterized protein LOC111794692 [Cucurbita pepo subsp. pepo]1.5e-5390.32Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
TrEMBL top hitse value%identityAlignment
A0A1S4E2S0 uncharacterized protein LOC1034992175.0e-4781.3Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNLV
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYE SESK LQK EK+NGK KKGKKI    ++D++E ED EGQLCCLQALKFSAGKMNLGMG+PNL+
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNLV

Query:  KMSKALKGFGWLSRHGSRKRSIH
        KM+KALKGFGWL+R+GSRKR IH
Subjt:  KMSKALKGFGWLSRHGSRKRSIH
A0A5D3DQW2 Reverse transcriptase5.0e-4781.3Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNLV
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYE SESK LQK EK+NGK KKGKKI    ++D++E ED EGQLCCLQALKFSAGKMNLGMG+PNL+
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNLV

Query:  KMSKALKGFGWLSRHGSRKRSIH
        KM+KALKGFGWL+R+GSRKR IH
Subjt:  KMSKALKGFGWLSRHGSRKRSIH
A0A6J1ERY4 uncharacterized protein LOC111437254 isoform X22.1e-5389.52Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        +RKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
A0A6J1ES68 uncharacterized protein LOC111437254 isoform X12.1e-5389.52Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        +RKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKINGKSKKGKKI     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
A0A6J1K488 uncharacterized protein LOC1114915446.1e-5388.71Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL
        MRKEKEWRRTL CKLFEE+HNSEGTEGMDSLWETYEKSE  KLQKNEKIN KSKKGKK+     +EDEDE+EDREGQLCCLQALKFSAGKMNLGMGRPNL
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKI-----EEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNL

Query:  VKMSKALKGFGWLSRHGSRKRSIH
        VKMSKALKGFGWLSRHGSRKRS+H
Subjt:  VKMSKALKGFGWLSRHGSRKRSIH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25130.1 unknown protein2.6e-2757.63Show/hide
Query:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYE---------KSESKKLQKNEKINGKSKKGKK---IEEDEDEFEDREGQLCCLQALKFSAGKMNL
        MRKEKEWRRTL CKLFEE+HN++  +GMD LWETYE         + E KKL+K  K   K+K  +K   +EE++D+  D + QLCCLQALKFS GKM+L
Subjt:  MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYE---------KSESKKLQKNEKINGKSKKGKK---IEEDEDEFEDREGQLCCLQALKFSAGKMNL

Query:  GMGRPNLVKMSKALKGFG
        G+ RPNL+K+SKA KG G
Subjt:  GMGRPNLVKMSKALKGFG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGGAGAAGGAATGGAGAAGAACACTCCCCTGTAAGCTCTTCGAAGAACAGCACAATTCAGAAGGAACGGAAGGGATGGATTCGCTGTGGGAGACATACGAGAA
GAGTGAATCGAAGAAACTGCAGAAGAACGAGAAAATCAATGGGAAATCGAAGAAAGGGAAGAAAATCGAAGAAGATGAAGATGAATTTGAAGATCGAGAAGGGCAACTGT
GCTGTTTACAGGCTCTGAAATTCTCGGCGGGGAAGATGAATTTGGGAATGGGGAGACCGAATCTTGTGAAAATGTCGAAAGCTTTGAAGGGATTTGGATGGTTGAGCAGA
CATGGAAGCAGAAAGAGATCGATCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGGAGAAGGAATGGAGAAGAACACTCCCCTGTAAGCTCTTCGAAGAACAGCACAATTCAGAAGGAACGGAAGGGATGGATTCGCTGTGGGAGACATACGAGAA
GAGTGAATCGAAGAAACTGCAGAAGAACGAGAAAATCAATGGGAAATCGAAGAAAGGGAAGAAAATCGAAGAAGATGAAGATGAATTTGAAGATCGAGAAGGGCAACTGT
GCTGTTTACAGGCTCTGAAATTCTCGGCGGGGAAGATGAATTTGGGAATGGGGAGACCGAATCTTGTGAAAATGTCGAAAGCTTTGAAGGGATTTGGATGGTTGAGCAGA
CATGGAAGCAGAAAGAGATCGATCCATTGA
Protein sequenceShow/hide protein sequence
MRKEKEWRRTLPCKLFEEQHNSEGTEGMDSLWETYEKSESKKLQKNEKINGKSKKGKKIEEDEDEFEDREGQLCCLQALKFSAGKMNLGMGRPNLVKMSKALKGFGWLSR
HGSRKRSIH