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Spg017598 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017598
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold9:34868363..34870175
RNA-Seq ExpressionSpg017598
SyntenySpg017598
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030269.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-2694.03Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP AKAP VRY
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

KAG7037321.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2792.75Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRYHS
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRP A+P AKAP VRYHS
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRYHS

XP_008463014.1 PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]6.5e-2591.04Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP AKAP VRY
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

XP_022139562.1 RPM1-interacting protein 4 [Momordica charantia]1.9e-2488.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRP ADP +KAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

XP_038897827.1 protein NOI4 [Benincasa hispida]8.5e-2589.55Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP ADP AKAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

TrEMBL top hitse value%identityAlignment
A0A1S3CI83 RPM1-interacting protein 4-like isoform X13.1e-2591.04Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DP AKAP VRY
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

A0A6J1CEA3 RPM1-interacting protein 49.2e-2588.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRP ADP +KAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

A0A6J1FE40 uncharacterized protein LOC1114432501.2e-2489.55Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP AKAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

A0A6J1ID15 uncharacterized protein LOC111474733 isoform X21.2e-2489.55Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP AKAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

A0A6J1IGN4 uncharacterized protein LOC111474733 isoform X11.2e-2489.55Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR  ADP AKAP  ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.2e-1972.73Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+   P
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP

Q8GYN5 RPM1-interacting protein 45.4e-0654.05Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein7.4e-1967.16Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G  +     + P+ ++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRY

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-2072.73Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+   P
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.5e-1973.44Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+   P
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.5e-1973.44Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G  ++   DP+   P
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRA---DPAAKAP

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.4e-1271.74Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS
        +KG+PLPKFGEWDVN+P SAEGFTVIF+KA DEKKT    G  P+S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGGTTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAA
AACAGGTGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAAGGCAGGCCTCGAGCAGATCCTGCTGCCAAGGCACCGTCTGTAAGATATCATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGGTTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAA
AACAGGTGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAAGGCAGGCCTCGAGCAGATCCTGCTGCCAAGGCACCGTCTGTAAGATATCATTCATAA
Protein sequenceShow/hide protein sequence
MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPRADPAAKAPSVRYHS