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Spg017615 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017615
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111469948
Genome locationscaffold9:31771331..31778487
RNA-Seq ExpressionSpg017615
SyntenySpg017615
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]6.3e-1052.33Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPP---RIDDDRADDYEDDGSDQPDDDQVTLILHAR
        MAN   + NIS+A+ REA +GT+ERMIR +E L+ER+GRLE Q Q   R+PPP   R+ D+  D+YE DGSD  +DDQ T++   R
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPP---RIDDDRADDYEDDGSDQPDDDQVTLILHAR

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]7.0e-0950Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD-QVTLILHAR
        M NP+++ +I++A++REAQQ TMER+IRGIEEL++R+GRLE Q Q  +RIP P       D YE D SD  +D+ QV  ++ +R
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD-QVTLILHAR

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]1.4e-0955.41Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD
        M NP+D+ NI++A++REAQQ TMER+IRGIEEL++R+GRLE Q Q  +RIP P       D YE D SD  +D+
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.4e-0955.41Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD
        M NP+D+ NI++A++REAQQ TMER+IRGIEEL++R+GRLE Q Q  +RIP P       D YE D SD  +D+
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]2.0e-0852.7Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD
        M NP+D+ +I++A++REAQQ TM+R+IRGIEEL++R+GRLE Q Q  +RIP P       D YE D SD  +D+
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein4.3e-0445.83Show/hide
Query:  EAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIP----PPRIDDDRADDYEDDGSDQPDDDQVTLI
        E Q+REAQQG + RMI  +E L++R+ R E + +  ER+P    PP + +   +  E DGSD  DDDQVTL+
Subjt:  EAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIP----PPRIDDDRADDYEDDGSDQPDDDQVTLI

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241153.0e-1052.33Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPP---RIDDDRADDYEDDGSDQPDDDQVTLILHAR
        MAN   + NIS+A+ REA +GT+ERMIR +E L+ER+GRLE Q Q   R+PPP   R+ D+  D+YE DGSD  +DDQ T++   R
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPP---RIDDDRADDYEDDGSDQPDDDQVTLILHAR

A0A6J1DYP6 uncharacterized protein LOC1110247373.3e-0465.79Show/hide
Query:  TQSSLNDVNKGTSIVMPQGPITRSRAKKLQQASITYIQ
        +Q   +DVN+G++IVMPQGPITRSR+KKLQQA ++Y+Q
Subjt:  TQSSLNDVNKGTSIVMPQGPITRSRAKKLQQASITYIQ

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699483.4e-0950Show/hide
Query:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD-QVTLILHAR
        M NP+++ +I++A++REAQQ TMER+IRGIEEL++R+GRLE Q Q  +RIP P       D YE D SD  +D+ QV  ++ +R
Subjt:  MANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLEAQYQPLERIPPPRIDDDRADDYEDDGSDQPDDD-QVTLILHAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCAATCAAGTCTAAATGATGTGAACAAAGGAACATCAATTGTCATGCCTCAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCATCAATTACCTA
TATTCAAGCTATGGTGAGCTCGACAAAGGACGTTCAAGGAGATGTTATCTTGCATGCTAGAGCCATTCAAGTAGTGTTGATCAAACCTCTTGTGGATATGGCAAATCCTG
AGGATGATCCTAACATTTCTGAAGCACAAATGAGAGAGGCACAACAAGGAACCATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCTGAACGTATGGGAAGGTTGGAA
GCTCAATACCAACCTCTTGAGAGAATTCCACCACCACGTATTGACGATGATCGAGCAGATGACTATGAGGATGATGGTTCCGATCAACCTGATGATGACCAAGTTACCTT
GATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCAATCAAGTCTAAATGATGTGAACAAAGGAACATCAATTGTCATGCCTCAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCATCAATTACCTA
TATTCAAGCTATGGTGAGCTCGACAAAGGACGTTCAAGGAGATGTTATCTTGCATGCTAGAGCCATTCAAGTAGTGTTGATCAAACCTCTTGTGGATATGGCAAATCCTG
AGGATGATCCTAACATTTCTGAAGCACAAATGAGAGAGGCACAACAAGGAACCATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCTGAACGTATGGGAAGGTTGGAA
GCTCAATACCAACCTCTTGAGAGAATTCCACCACCACGTATTGACGATGATCGAGCAGATGACTATGAGGATGATGGTTCCGATCAACCTGATGATGACCAAGTTACCTT
GATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTGTGGAGTGA
Protein sequenceShow/hide protein sequence
MTQSSLNDVNKGTSIVMPQGPITRSRAKKLQQASITYIQAMVSSTKDVQGDVILHARAIQVVLIKPLVDMANPEDDPNISEAQMREAQQGTMERMIRGIEELSERMGRLE
AQYQPLERIPPPRIDDDRADDYEDDGSDQPDDDQVTLILHARVIQVVLIKPLVE