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Spg017648 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017648
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L7a
Genome locationscaffold9:34159169..34161324
RNA-Seq ExpressionSpg017648
SyntenySpg017648
Gene Ontology termsGO:0042254 - ribosome biogenesis (biological process)
GO:0005840 - ribosome (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACG47588.1 60S ribosomal protein L7a [Zea mays]3.5e-0455.32Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSLPVKLLKG
        +LE +K N NDK+DE RKKWG GIMGS  + K +  +S LP KL  G
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSLPVKLLKG
XP_011651548.1 60S ribosomal protein L7a-2 isoform X2 [Cucumis sativus]7.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
XP_021907045.1 60S ribosomal protein L7a-1 [Carica papaya]5.9e-0462.5Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        +LE +K N NDKYDEYRKKWG GIMGS  + K K R   L
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
XP_030531329.1 60S ribosomal protein L7a-1-like [Rhodamnia argentea]5.9e-0462.5Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        +LE +K N NDKYDEYRKKWG GIMGS  + K K R   L
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
XP_038875632.1 60S ribosomal protein L7a-2-like [Benincasa hispida]7.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
TrEMBL top hitse value%identityAlignment
A0A0A0KPQ6 60S ribosomal protein L7a3.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
A0A0A0LBU9 60S ribosomal protein L7a3.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
A0A218WEZ5 60S ribosomal protein L7a3.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
A0A5D3DB00 60S ribosomal protein L7a3.7e-0454Show/hide
Query:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        D +E+ R   +LE +K N NDKYDEYRKKWG GIMGS  + K K +   L
Subjt:  DFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
B6UE05 60S ribosomal protein L7a1.7e-0455.32Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSLPVKLLKG
        +LE +K N NDK+DE RKKWG GIMGS  + K +  +S LP KL  G
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSLPVKLLKG
SwissProt top hitse value%identityAlignment
P0DKK7 60S ribosomal protein L7a-21.9e-0555Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        +LE +K N NDK+DE RKKWG G+MGS  + K K R   L
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
P35685 60S ribosomal protein L7a-11.9e-0555Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
        +LE +K N NDK+DE RKKWG G+MGS  + K K R   L
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRSSL
P49692 60S ribosomal protein L7a-15.0e-0661.11Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
        +LE +K N NDKY+EYRKKWG GIMGS  + K K +
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
Q9LZH9 60S ribosomal protein L7a-25.0e-0661.11Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
        +LE +K N NDKY+EYRKKWG GIMGS  + K K +
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
Arabidopsis top hitse value%identityAlignment
AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.6e-0761.11Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
        +LE +K N NDKY+EYRKKWG GIMGS  + K K +
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.6e-0761.11Show/hide
Query:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR
        +LE +K N NDKY+EYRKKWG GIMGS  + K K +
Subjt:  LLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGTTCTTCTTCTCCAACGTCGAGAGCTGCAATGCCAACACCTCCCTTCGCGAGCCAGCAGCCGTCGACTTCTTCCTCTCTCCTGCTCTGATTACGTTCTCCGG
TCGACGCTACTTATTCCGTTGGAGCTTCCTCTCCGACTTCTTTAGCTTCTACAGTAATATTGCAGAACTAGACCTTGACTTTGTTGAGTACCATAGAAAGGGATGCTTGC
TTGAATTTGTCAAGGTAAACTTAAATGACAAGTATGACGAGTATAGGAAGAAGTGGGGTGACGGAATCATGGGTTCAACTTACAGACCAAAACCAAAGCAAAGGAGAAGC
TCCTTGCCAGTGAAGCTGCTCAAAGGATGTCTTAAGAATTTAGAGGCCAACAGTAGAGGAATAGCTTCTAGTATAACAGACAGAGGATGTCAATGGATGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGTTCTTCTTCTCCAACGTCGAGAGCTGCAATGCCAACACCTCCCTTCGCGAGCCAGCAGCCGTCGACTTCTTCCTCTCTCCTGCTCTGATTACGTTCTCCGG
TCGACGCTACTTATTCCGTTGGAGCTTCCTCTCCGACTTCTTTAGCTTCTACAGTAATATTGCAGAACTAGACCTTGACTTTGTTGAGTACCATAGAAAGGGATGCTTGC
TTGAATTTGTCAAGGTAAACTTAAATGACAAGTATGACGAGTATAGGAAGAAGTGGGGTGACGGAATCATGGGTTCAACTTACAGACCAAAACCAAAGCAAAGGAGAAGC
TCCTTGCCAGTGAAGCTGCTCAAAGGATGTCTTAAGAATTTAGAGGCCAACAGTAGAGGAATAGCTTCTAGTATAACAGACAGAGGATGTCAATGGATGGCTTAG
Protein sequenceShow/hide protein sequence
MAEFFFSNVESCNANTSLREPAAVDFFLSPALITFSGRRYLFRWSFLSDFFSFYSNIAELDLDFVEYHRKGCLLEFVKVNLNDKYDEYRKKWGDGIMGSTYRPKPKQRRS
SLPVKLLKGCLKNLEANSRGIASSITDRGCQWMA