CuGenDBv2

Gene ID	Spg017655
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Deubiquitinating enzyme MINDY-3
Genome location	scaffold9:32514447..32515729
RNA-Seq Expression	Spg017655
Synteny	Spg017655
Gene Ontology terms	GO:0071108 - protein K48-linked deubiquitination (biological process) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function) GO:1990380 - Lys48-specific deubiquitinase activity (molecular function)
InterPro domains	IPR003903 - Ubiquitin interacting motif IPR025257 - Deubiquitinating enzyme MINDY-3/4, conserved domain IPR039785 - Deubiquitinating enzyme MINDY-3/4

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607675.1 Ubiquitin carboxyl-terminal hydrolase MINDY-3, partial [Cucurbita argyrosperma subsp. sororia]

8.6e-71

94.3

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+GAPTFSSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF+VKDVNL GK+
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        +LESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

XP_022153722.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Momordica charantia]

4.2e-70

93.67

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLG PT SSEESPEVK+RRLQRELMAAAAEKRMLASKSYS+AVGSASKS KK+KEF+VKDVNL GKE
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        LLESEANQLFSMVFGD VSKEILAQWSNQGIRFSPDPET+MGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

XP_022926237.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita moschata]

8.6e-71

94.3

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+GAPTFSSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF+VKDVNL GK+
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        +LESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

XP_023523420.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita pepo subsp. pepo]

8.6e-71

94.3

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+GAPTFSSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF+VKDVNL GK+
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        +LESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

XP_038899722.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Benincasa hispida]

2.5e-70

94.94

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPT SSEESPEVKSRRLQRELMAAAAEKRMLA+KSYS AVGSASKSVKK KE +VKDVNL GKE
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        LLE EANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9R0 Deubiquitinating enzyme MINDY-3

5.1e-69

92.41

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLR ALRMSMQQHSPPEPKRSKPRDSP+G PT SSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGS+SKSVKK K+ +VKD NL GKE
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        LLE+EANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

A0A1S3CG70 Deubiquitinating enzyme MINDY-3

3.0e-69

92.41

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLR ALRMSMQQHSPPEPKRSKPRDSP+G PT SSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGS+SKSVKK K+F+VKD NL GKE
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        L E+EANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

A0A6J1DJQ8 Deubiquitinating enzyme MINDY-3

2.1e-70

93.67

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLG PT SSEESPEVK+RRLQRELMAAAAEKRMLASKSYS+AVGSASKS KK+KEF+VKDVNL GKE
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        LLESEANQLFSMVFGD VSKEILAQWSNQGIRFSPDPET+MGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

A0A6J1EE00 Deubiquitinating enzyme MINDY-3

4.1e-71

94.3

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+GAPTFSSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF+VKDVNL GK+
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        +LESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

A0A6J1IZG3 Deubiquitinating enzyme MINDY-3

1.3e-69

93.04

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Query:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+GAPTFSSEES EVK+R +QRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF VKDVNL GK+
Subjt:  MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKE

Query:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
        +LESEANQLFSMVFGD+VSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
Subjt:  LLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43690.1 ubiquitin interaction motif-containing protein

1.4e-39

60.98

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Query:  MAD-QEEEDLRTALRMSMQQHSPPEPKRSKP-RDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSAS----KSVKKEKEFTVKDV
        MAD QE+EDL+ AL+MSM Q++PPEPKRSKP  +   G+ + S  ESPE KSRRLQRELMAAAAEKRM+        V  A       V  +K+  V   
Subjt:  MAD-QEEEDLRTALRMSMQQHSPPEPKRSKP-RDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSAS----KSVKKEKEFTVKDV

Query:  NLGGKELLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ
         L GKEL   E++QLFS+VFG+EVSK +LAQW+NQGIRFSPDPET++GLVQHEGGPCGVLA +Q
Subjt:  NLGGKELLESEANQLFSMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQ

Sequences

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CDS sequence

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ATGGCGGATCAGGAGGAGGAGGACCTCCGGACGGCTCTACGGATGAGCATGCAGCAGCACTCGCCGCCGGAACCCAAACGGAGCAAGCCCAGGGATTCCCCACTTGGAGC
TCCGACTTTCTCGTCGGAGGAGTCTCCGGAAGTGAAGAGCCGGAGGTTGCAGCGGGAGCTTATGGCTGCTGCTGCTGAAAAGCGAATGTTGGCCTCCAAGAGCTATTCCG
AAGCAGTTGGTTCTGCATCGAAGTCGGTGAAGAAAGAGAAGGAGTTTACTGTGAAGGACGTGAATTTGGGGGGGAAGGAGTTGTTGGAGAGTGAAGCGAACCAGCTGTTT
TCAATGGTGTTCGGGGATGAGGTTTCCAAAGAAATACTTGCGCAATGGAGTAATCAGGGCATAAGGTTTAGCCCCGATCCAGAAACGTCAATGGGCTTAGTGCAGCATGA
AGGTGGGCCTTGTGGCGTCTTAGCAACCATTCAAGTAATCCCTGATTTCTCAGAATATAGTCTTTAG

mRNA sequence

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Protein sequence

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MADQEEEDLRTALRMSMQQHSPPEPKRSKPRDSPLGAPTFSSEESPEVKSRRLQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFTVKDVNLGGKELLESEANQLF
SMVFGDEVSKEILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQVIPDFSEYSL

Spg017655 (gene) of Sponge gourd (cylindrica) v1 genome