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Spg017710 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017710
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGirdin-like
Genome locationscaffold9:34117822..34121698
RNA-Seq ExpressionSpg017710
SyntenySpg017710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.4e-2434.78Show/hide
Query:  LARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCP----------------------------W------
        LAR  ++ + GL L+ALCIY  +++PR+KGYV+ +V+  F  IE+GVNP IP++ ET R+LN+C                             W      
Subjt:  LARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCP----------------------------W------

Query:  ------GCVHYAPLLALRQSWFKQFILATHSLNKLEFSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSKI
              G + Y+PLL LRQSW KQF      L   EFSY    +N ++ + + +W+ V+++    H EG T +Y  WR  R+ I
Subjt:  ------GCVHYAPLLALRQSWFKQFILATHSLNKLEFSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSKI

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]5.0e-2530.36Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  I E+ GL LLALCIY  V++P+ +GYVD  V+  FF +E+GVNP IP+LAET R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE
                                                                            PWG V+Y PLL LRQ W KQFI  TH+L + +
Subjt:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY  ED   + RQ + +W+++R++ D  H EGVT  Y  W+  R K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]1.9e-2429.55Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  I E+ GL LLALCIY  V++P+ +GYVDG V+  FF +E+GVNP IP+LA+T R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE
                                                                            PWG V+Y PLL LRQ W KQFI  T +L + +
Subjt:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY+ ED   + RQ + +W+++R++ D  H EGVT  Y  W+  + K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]9.4e-2429.96Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  + E+ GL LLALCIY  V++P+ +GYVDG V+  FF +E+GVNP IP+LAET R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  ---PW-----------------------------------------------------------------GCVHYAPLLALRQSWFKQFILATHSLNKLE
           PW                                                                 G V+Y PLL LRQ W KQFI  TH+L + +
Subjt:  ---PW-----------------------------------------------------------------GCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY  ED   + RQ + +W+++R++ D  H EGV   Y  W+  R K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]2.5e-2440.97Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCPWGCVHYAPLLALRQSWFKQFILATHSLNKLEFSY
        K+ +  + E+ GL LLALCIY  V++P+ +GYVDG  + +      G   ++PLL          PWG V+Y PLL L Q W KQFI  TH+L + +FSY
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCPWGCVHYAPLLALRQSWFKQFILATHSLNKLEFSY

Query:  SCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
          ED   + RQ + +W+++R++ D  H EGVT  Y  W+  R K
Subjt:  SCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like4.6e-2434.78Show/hide
Query:  LARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCP----------------------------W------
        LAR  ++ + GL L+ALCIY  +++PR+KGYV+ +V+  F  IE+GVNP IP++ ET R+LN+C                             W      
Subjt:  LARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCP----------------------------W------

Query:  ------GCVHYAPLLALRQSWFKQFILATHSLNKLEFSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSKI
              G + Y+PLL LRQSW KQF      L   EFSY    +N ++ + + +W+ V+++    H EG T +Y  WR  R+ I
Subjt:  ------GCVHYAPLLALRQSWFKQFILATHSLNKLEFSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSKI

A0A5A7T5S7 Girdin-like2.4e-2530.36Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  I E+ GL LLALCIY  V++P+ +GYVD  V+  FF +E+GVNP IP+LAET R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE
                                                                            PWG V+Y PLL LRQ W KQFI  TH+L + +
Subjt:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY  ED   + RQ + +W+++R++ D  H EGVT  Y  W+  R K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

A0A5A7UL51 Girdin-like9.2e-2529.55Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  I E+ GL LLALCIY  V++P+ +GYVDG V+  FF +E+GVNP IP+LA+T R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE
                                                                            PWG V+Y PLL LRQ W KQFI  T +L + +
Subjt:  --------------------------------------------------------------------PWGCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY+ ED   + RQ + +W+++R++ D  H EGVT  Y  W+  + K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

A0A5A7UWQ6 Uncharacterized protein4.6e-2429.96Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------
        K+ +  + E+ GL LLALCIY  V++P+ +GYVDG V+  FF +E+GVNP IP+LAET R+LNYC                                   
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYC-----------------------------------

Query:  ---PW-----------------------------------------------------------------GCVHYAPLLALRQSWFKQFILATHSLNKLE
           PW                                                                 G V+Y PLL LRQ W KQFI  TH+L + +
Subjt:  ---PW-----------------------------------------------------------------GCVHYAPLLALRQSWFKQFILATHSLNKLE

Query:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
        FSY  ED   + RQ + +W+++R++ D  H EGV   Y  W+  R K
Subjt:  FSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

A0A5A7VFL0 Girdin-like1.2e-2440.97Show/hide
Query:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCPWGCVHYAPLLALRQSWFKQFILATHSLNKLEFSY
        K+ +  + E+ GL LLALCIY  V++P+ +GYVDG  + +      G   ++PLL          PWG V+Y PLL L Q W KQFI  TH+L + +FSY
Subjt:  KLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIPLLAETVRALNYCPWGCVHYAPLLALRQSWFKQFILATHSLNKLEFSY

Query:  SCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK
          ED   + RQ + +W+++R++ D  H EGVT  Y  W+  R K
Subjt:  SCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAAACGAACTCACGAACGATGAACAATCCAATTGGGCACCACCAAAGAAGCCTTCACCGGGGATTATAGGTGGTATGCTGCGGCATGGACGCTTCTGCCGTCG
TACGAATATATGGACCGAAACTGGATGGAAATGGCAGGCCAGCTTGAGGATTTTCAATCGAAAACTCGCTCGCAAAAACATAACTGAAGAAAATGGCCTGGTTCTGTTAG
CTCTGTGCATCTACAAGATGGTCCTGTATCCCAGAGTAAAAGGGTATGTGGATGGCGATGTCTTGACGTTCTTCTTCTGCATTGAGCAAGGGGTGAATCCAACCATACCT
CTTCTGGCAGAAACAGTTCGGGCGCTCAATTATTGTCCTTGGGGGTGCGTCCATTATGCTCCGTTGTTAGCCTTGCGGCAAAGCTGGTTTAAGCAATTCATACTAGCAAC
TCATAGTCTCAATAAACTAGAATTTTCCTACAGCTGCGAGGATTCTAATGAAAGGATGCGACAAGTGTTGGCTTCCTGGAGGGCAGTTAGAAGGTTAAATGATAACAGTC
ATTCTGAGGGAGTTACTCCAGAATACTTGCAGTGGCGCATCAGGAGGAGCAAGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAAACGAACTCACGAACGATGAACAATCCAATTGGGCACCACCAAAGAAGCCTTCACCGGGGATTATAGGTGGTATGCTGCGGCATGGACGCTTCTGCCGTCG
TACGAATATATGGACCGAAACTGGATGGAAATGGCAGGCCAGCTTGAGGATTTTCAATCGAAAACTCGCTCGCAAAAACATAACTGAAGAAAATGGCCTGGTTCTGTTAG
CTCTGTGCATCTACAAGATGGTCCTGTATCCCAGAGTAAAAGGGTATGTGGATGGCGATGTCTTGACGTTCTTCTTCTGCATTGAGCAAGGGGTGAATCCAACCATACCT
CTTCTGGCAGAAACAGTTCGGGCGCTCAATTATTGTCCTTGGGGGTGCGTCCATTATGCTCCGTTGTTAGCCTTGCGGCAAAGCTGGTTTAAGCAATTCATACTAGCAAC
TCATAGTCTCAATAAACTAGAATTTTCCTACAGCTGCGAGGATTCTAATGAAAGGATGCGACAAGTGTTGGCTTCCTGGAGGGCAGTTAGAAGGTTAAATGATAACAGTC
ATTCTGAGGGAGTTACTCCAGAATACTTGCAGTGGCGCATCAGGAGGAGCAAGATCTAA
Protein sequenceShow/hide protein sequence
MATNELTNDEQSNWAPPKKPSPGIIGGMLRHGRFCRRTNIWTETGWKWQASLRIFNRKLARKNITEENGLVLLALCIYKMVLYPRVKGYVDGDVLTFFFCIEQGVNPTIP
LLAETVRALNYCPWGCVHYAPLLALRQSWFKQFILATHSLNKLEFSYSCEDSNERMRQVLASWRAVRRLNDNSHSEGVTPEYLQWRIRRSKI