; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017798 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017798
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsmall RNA degrading nuclease 5-like
Genome locationscaffold9:32945096..32951606
RNA-Seq ExpressionSpg017798
SyntenySpg017798
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037276.1 Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-13685.86Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +SNVGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKILPTFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQER  PEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +     +LR+    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

XP_022926206.1 small RNA degrading nuclease 5-like [Cucurbita moschata]1.1e-13585.19Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +S+VGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKILPTFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQER  PEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +   + +L +    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

XP_022981433.1 small RNA degrading nuclease 5-like [Cucurbita maxima]1.3e-13685.86Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +SNVGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKILPTFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQERF PEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +     +L +    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

XP_023525579.1 small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo]5.1e-13685.86Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +SNVGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKIL TFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQER DPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +     LL +    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

XP_023534811.1 small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo]8.4e-13183.28Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKE---NPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY
        MPSSSVSALD++EE +SNVG T+E    PSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY
Subjt:  MPSSSVSALDSEEEAQSNVGKTKE---NPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY

Query:  MSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPF
        MSQ+KILPTFKRFCG+PR VLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQE F PEK++PISIKLPKELPFPVTYYTLTAKELEDNGYPF
Subjt:  MSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPF

Query:  NQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQK
        NQPGFI TLPAPMGSSPYE+LALDCEM           CVTCEGFELTRITLVDM GQ VLDKLVKPSNAIVDYNTR +     +L      + ++VQK
Subjt:  NQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQK

TrEMBL top hitse value%identityAlignment
A0A6J1DJM2 small RNA degrading nuclease 58.8e-12674.1Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSSS S LDSE+EAQ NVGKTKE  SFFDIYGTDAKAEV+FKTP+SNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKV MVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDL-KNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQ
        +KILPTFK+FCGNPRAVLALSC+SDRMQTIDALLTCKVKRKR AN VDL K+  T+EQERF  EKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQ
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDL-KNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQ

Query:  PGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLL-----------RRFMK
        PGFI+TLPAP+GS PYE+LALDCEM           CVTCEGFELTRITLVDM+G+ VLDKLVKP NAIVDYNTR +   + +L           R F+ 
Subjt:  PGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLL-----------RRFMK

Query:  GIKKEVQKL-LAIERNLAKLTQTSDETVKALV
         + KE   +  ++E +L  L  + D  V   V
Subjt:  GIKKEVQKL-LAIERNLAKLTQTSDETVKALV

A0A6J1EE80 small RNA degrading nuclease 5-like5.5e-13685.19Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +S+VGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKILPTFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQER  PEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +   + +L +    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

A0A6J1FAZ1 small RNA degrading nuclease 5-like4.1e-13183.28Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKE---NPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY
        MPSSSVSALD++EE +SNVG T+E    PSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY
Subjt:  MPSSSVSALDSEEEAQSNVGKTKE---NPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALY

Query:  MSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPF
        MSQ+KILPTFKRFCG+PR VLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQE F PEK++PISIKLPKELPFPVTYYTLTAKELEDNGYPF
Subjt:  MSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPF

Query:  NQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQK
        NQPGFI TLPAPMGSSPYE+LALDCEM           CVTCEGFELTRITLVDM GQ VLDKLVKPSNAIVDYNTR +     +L      + ++VQK
Subjt:  NQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQK

A0A6J1IFC2 small RNA degrading nuclease 5-like1.4e-12874.26Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKT-------KENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLD
        MPSSSVSALD++EE +SNVG T       +E PSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLD
Subjt:  MPSSSVSALDSEEEAQSNVGKT-------KENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLD

Query:  AALYMSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDN
        AALYMSQ+KILPTFKRFCG+PR VLALSCISDRMQTIDALLTCKVKRKRDANSV LKNK+TSEQE F PEK++PISIKLPKELPFPVTYYTLTAKELEDN
Subjt:  AALYMSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDN

Query:  GYPFNQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRF---MKGI
        GYPFNQPGFI TLPAPMGSSPYE+LALDCEM           CVTCEGFELTRITLVDM GQ VLDKLVKPSNAIV+YNTR +     +L      ++ +
Subjt:  GYPFNQPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRF---MKGI

Query:  KKEVQKLL---------AIERNLAKLTQTSDETVKALV
        +K++  L+         ++E +L  L  + D  V   V
Subjt:  KKEVQKLL---------AIERNLAKLTQTSDETVKALV

A0A6J1J229 small RNA degrading nuclease 5-like6.5e-13785.86Show/hide
Query:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
        MPSS VSALDSEEE +SNVGKTKENPSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ
Subjt:  MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ

Query:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
        TKILPTFK+ CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQERF PEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP
Subjt:  TKILPTFKRFCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP

Query:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL
        GFI+TLPAP+GSSPYE+LALDCEM           CVTCEGFELTRITLVDMEGQ VLDKLVKPSNAIVDYNTR +     +L +    + ++VQK+
Subjt:  GFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKL

SwissProt top hitse value%identityAlignment
O94443 Uncharacterized exonuclease C637.092.2e-1225.23Show/hide
Query:  DSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESN--STLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTF
        DS +++QS   K K+          +    +  +T E+N    L + D+Q LV W LA+G  PSWV ++NK +I + V++ +PGL+ + +         F
Subjt:  DSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESN--STLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTF

Query:  KRFCGNPRAVLALSCISDRMQTIDALLTCKV-----------KRKRDANSVD--LKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELE---
        +   GN  + L  + +++    I     C+V            R R  + V+  L++ L++EQ++   +KET       K   + ++Y +    E     
Subjt:  KRFCGNPRAVLALSCISDRMQTIDALLTCKV-----------KRKRDANSVD--LKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELE---

Query:  --DNGYPFNQPGFIYTLPAPMGSSPY--EILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFM
            G    QP           S P   +ILA+DCEM  T             G E+ R+T+VDM+ + + D+ VKP + + DY T+ +      LR  +
Subjt:  --DNGYPFNQPGFIYTLPAPMGSSPY--EILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFM

Query:  KGIKKEVQKLL--AIERNLAKLTQTSDETVKAL
          +  +VQ  L   ++ N   L  + +  +  L
Subjt:  KGIKKEVQKLL--AIERNLAKLTQTSDETVKAL

P48778 Exonuclease GOR1.1e-0841.57Show/hide
Query:  AKELEDNGYPFNQPGFIYTLPAPMGSSPYE-ILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTR
        AK+   +G   +  GF+ T    +    Y  I ALDCEM           C T  G ELTR+T+VD + + V D  VKP N IVDYNTR
Subjt:  AKELEDNGYPFNQPGFIYTLPAPMGSSPYE-ILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTR

P53331 RNA exonuclease 11.4e-0824.81Show/hide
Query:  LSLQDVQGLVTWVL-AEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLT-CKVKRKRDANSVD
        + ++DV+ +  ++L AE   P W+ I N+  + K++++++PGL    + +      TF     +    +    I+    T   +    K+      NS  
Subjt:  LSLQDVQGLVTWVL-AEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCGNPRAVLALSCISDRMQTIDALLT-CKVKRKRDANSVD

Query:  LKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFN------QPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGF
          N   S+ E+ +  KE      L K+    +    L+ ++L  N YP +         ++ T+    G S   I ALDCEM           C++ +G 
Subjt:  LKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFN------QPGFIYTLPAPMGSSPYEILALDCEMASTFFFPNFKKCVTCEGF

Query:  ELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKLLAIERNLAKLTQTSD
         LTRI+LV+ + + + ++LVKP   IVDY TR +        +   G KK +++   ++++L K+   SD
Subjt:  ELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKLLAIERNLAKLTQTSD

Q8IX06 Putative exonuclease GOR1.1e-0841.57Show/hide
Query:  AKELEDNGYPFNQPGFIYTLPAPMGSSPYE-ILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTR
        AK+   +G   +  GF+ T    +    Y  I ALDCEM           C T  G ELTR+T+VD + + V D  VKP N IVDYNTR
Subjt:  AKELEDNGYPFNQPGFIYTLPAPMGSSPYE-ILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTR

Q8L7M4 Small RNA degrading nuclease 57.3e-7753.98Show/hide
Query:  EEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCG
        E+      K+    SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVV++YLPGLDAALY+S +K L + K  CG
Subjt:  EEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCG

Query:  NPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIYTLPAPMGS
        NP A+LALSC+ D M+TID +LTCK ++K+   S      L S  E  +   ++   ++L K++PFPV+YYTL+ KE+E NGY F +     TLPAP GS
Subjt:  NPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIYTLPAPMGS

Query:  SPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLR---RFMKGIKKEVQKLL
         P EI+ALDCEM           C+T EG ELTR+TLVD++GQ +LDKLV P+N I DYNTR +   A ++      +K I++E  KL+
Subjt:  SPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLR---RFMKGIKKEVQKLL

Arabidopsis top hitse value%identityAlignment
AT5G25800.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-7853.98Show/hide
Query:  EEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCG
        E+      K+    SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVV++YLPGLDAALY+S +K L + K  CG
Subjt:  EEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRFCG

Query:  NPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIYTLPAPMGS
        NP A+LALSC+ D M+TID +LTCK ++K+   S      L S  E  +   ++   ++L K++PFPV+YYTL+ KE+E NGY F +     TLPAP GS
Subjt:  NPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIYTLPAPMGS

Query:  SPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLR---RFMKGIKKEVQKLL
         P EI+ALDCEM           C+T EG ELTR+TLVD++GQ +LDKLV P+N I DYNTR +   A ++      +K I++E  KL+
Subjt:  SPYEILALDCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLR---RFMKGIKKEVQKLL

AT5G67240.1 small RNA degrading nuclease 38.4e-0433.71Show/hide
Query:  ILALDCEMASTFFFPNFKKCVTCE--GFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRR---FMKGIKKEVQKLLAI
        +L++DCEM            VTCE     L R+  VD + + VLDK VKP   ++DY T  T   A  L R    +  I+K++++ L++
Subjt:  ILALDCEMASTFFFPNFKKCVTCE--GFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRR---FMKGIKKEVQKLLAI

AT5G67240.2 small RNA degrading nuclease 38.4e-0433.71Show/hide
Query:  ILALDCEMASTFFFPNFKKCVTCE--GFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRR---FMKGIKKEVQKLLAI
        +L++DCEM            VTCE     L R+  VD + + VLDK VKP   ++DY T  T   A  L R    +  I+K++++ L++
Subjt:  ILALDCEMASTFFFPNFKKCVTCE--GFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRR---FMKGIKKEVQKLLAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTTCCAGTGTTTCAGCTTTGGATTCCGAAGAAGAAGCCCAGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGCCAA
AGCTGAGGTTCTTTTCAAAACTCCAGAATCTAACTCAACCTTAAGTCTGCAAGACGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAAGGTTTCATGCCATCATGGGTTT
TTATTAAGAACAAACCCCTTATACCAAAAGTGGTTATGGTTTATCTTCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACATTTAAAAGATTC
TGCGGCAATCCAAGGGCCGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAAGTAAAGAGAAAGAGGGATGCAAATAGTGT
AGACTTAAAGAATAAATTGACATCTGAACAAGAAAGATTTGACCCTGAAAAAGAAACACCAATATCTATCAAACTCCCGAAGGAATTACCTTTCCCTGTTACATATTATA
CGCTAACTGCAAAAGAACTGGAAGACAATGGTTATCCTTTCAATCAACCAGGTTTTATCTATACACTTCCTGCTCCTATGGGATCTTCACCCTATGAAATCTTGGCACTT
GACTGTGAGATGGCAAGTACATTTTTCTTTCCAAATTTTAAGAAATGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGACTGT
CCTTGACAAGTTGGTAAAACCATCCAATGCGATTGTTGACTACAATACGAGGCGAACTTCTTCACAAGCGTTTCTTCTCCGCCGCTTCATGAAGGGCATCAAGAAGGAGG
TTCAGAAGTTGTTGGCGATAGAGCGGAACTTAGCGAAGCTGACTCAGACGTCAGATGAGACGGTCAAGGCTTTGGTCGCCATAGAAATGGAAATGGCGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCTTCCAGTGTTTCAGCTTTGGATTCCGAAGAAGAAGCCCAGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGCCAA
AGCTGAGGTTCTTTTCAAAACTCCAGAATCTAACTCAACCTTAAGTCTGCAAGACGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAAGGTTTCATGCCATCATGGGTTT
TTATTAAGAACAAACCCCTTATACCAAAAGTGGTTATGGTTTATCTTCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACATTTAAAAGATTC
TGCGGCAATCCAAGGGCCGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAAGTAAAGAGAAAGAGGGATGCAAATAGTGT
AGACTTAAAGAATAAATTGACATCTGAACAAGAAAGATTTGACCCTGAAAAAGAAACACCAATATCTATCAAACTCCCGAAGGAATTACCTTTCCCTGTTACATATTATA
CGCTAACTGCAAAAGAACTGGAAGACAATGGTTATCCTTTCAATCAACCAGGTTTTATCTATACACTTCCTGCTCCTATGGGATCTTCACCCTATGAAATCTTGGCACTT
GACTGTGAGATGGCAAGTACATTTTTCTTTCCAAATTTTAAGAAATGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGACTGT
CCTTGACAAGTTGGTAAAACCATCCAATGCGATTGTTGACTACAATACGAGGCGAACTTCTTCACAAGCGTTTCTTCTCCGCCGCTTCATGAAGGGCATCAAGAAGGAGG
TTCAGAAGTTGTTGGCGATAGAGCGGAACTTAGCGAAGCTGACTCAGACGTCAGATGAGACGGTCAAGGCTTTGGTCGCCATAGAAATGGAAATGGCGTACTGA
Protein sequenceShow/hide protein sequence
MPSSSVSALDSEEEAQSNVGKTKENPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKRF
CGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQERFDPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIYTLPAPMGSSPYEILAL
DCEMASTFFFPNFKKCVTCEGFELTRITLVDMEGQTVLDKLVKPSNAIVDYNTRRTSSQAFLLRRFMKGIKKEVQKLLAIERNLAKLTQTSDETVKALVAIEMEMAY