; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017822 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017822
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold9:32213032..32216710
RNA-Seq ExpressionSpg017822
SyntenySpg017822
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.3e-2029.77Show/hide
Query:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI
        +D ++N+  I+ +FE ASGLNIN SKS +  I++     + +  ++G  +G                     D  +  I     +W   QL    G + +
Subjt:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI

Query:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW
         N    +L +    ++ +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W L + R L D E   W ++   L +  L NR     
Subjt:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW

Query:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD
        +W L S+NIF   S+++ L + P    N   +LYK +W   +P K K F+W L HG INTAD
Subjt:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD

KAE8689350.1 Pescadillo-like protein [Hibiscus syriacus]2.3e-2129.79Show/hide
Query:  LANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRN------LALLAKRLGNGLA
        L N+  ++ I+EL  GL +N +KS + GI++ E EL       GC +G               +   L+ G G GNL  +N         L  R GNG +
Subjt:  LANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRN------LALLAKRLGNGLA

Query:  TSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQT--AWDLSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLRE--
          FW+D WL    L   FPRL+ L++     V E  + + +   WD+  +RNL D E E+W+ L  +L+S SL    +D W+W       F+ KS  +  
Subjt:  TSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQT--AWDLSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLRE--

Query:  -DLVDYPNMAKDLYKVIWTDFYPMKIKIFLWELSH
         D      +  +  + +W    P +++ F+W+L+H
Subjt:  -DLVDYPNMAKDLYKVIWTDFYPMKIKIFLWELSH

KAE8690072.1 hypothetical protein F3Y22_tig00110927pilonHSYRG00013 [Hibiscus syriacus]1.3e-2436.81Show/hide
Query:  GTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTA--WDLSLRRNL
        G+     +H +NW  V  P  +GG+GI NL   N ALL K +GNG    FWHDSWL    L   FPR++ L+      V E    S +   WD+ LRRNL
Subjt:  GTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTA--WDLSLRRNL

Query:  NDIETEEWMDLSLILSSVSLQN-RNDSWIWPLESSNIFSVKSLREDLVDYPNMAKD---LYKVIWTDFYPMKIKIFLWELSH
         D E E+WM L  +L+S SL + ++D W+W       FS KS  +   D+    +D      ++WT   P +++ F+W+ +H
Subjt:  NDIETEEWMDLSLILSSVSLQN-RNDSWIWPLESSNIFSVKSLREDLVDYPNMAKD---LYKVIWTDFYPMKIKIFLWELSH

RVW30353.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.5e-2027.55Show/hide
Query:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRL--------
        E+ L  +  ++ +F   SGL +N +KS + GI+++++ L  L          + D   H + W  V  P  +GG+G+GN+  RNLALL K L        
Subjt:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRL--------

Query:  --------------------------------------------------GNGLATSFWHDSWLNCGVLATNFPRLYR-LTDCPRSLVGETWIASQTAWD
                                                          GNG    FW D W     L T +PRL+R + D   S+      +    W+
Subjt:  --------------------------------------------------GNGLATSFWHDSWLNCGVLATNFPRLYR-LTDCPRSLVGETWIASQTAWD

Query:  LSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLREDLVDYPNMAKDL-YKVIWTDFYPMKIKIFLWELSHGAINTAD
        L+ RRNL+D E E+   L   L  + L  +  D+ +WPL SS +FSVKS    L       ++   K +W    P K+K F+W ++H  +NT D
Subjt:  LSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLREDLVDYPNMAKDL-YKVIWTDFYPMKIKIFLWELSHGAINTAD

XP_038891595.1 uncharacterized protein LOC120080986 [Benincasa hispida]3.2e-2330.04Show/hide
Query:  INYSKSEVLGIHIEESELEWLTTTFGCK--------------------------------------------------------QGTRGDGGMHNINWAT
        IN +KSE+LGIH+ +SE +WL  +FG K                                                        + +  D G+HN+NW  
Subjt:  INYSKSEVLGIHIEESELEWLTTTFGCK--------------------------------------------------------QGTRGDGGMHNINWAT

Query:  VQLPHLMGGVGIGNLQNR--------------------------------------------------NLALLAKR----LGNGLATSFWHDSWLNCGVL
         Q P L+GG+GIGN ++R                                                  N+ L+A R    LG+G +TS W+DSWLNCG+L
Subjt:  VQLPHLMGGVGIGNLQNR--------------------------------------------------NLALLAKR----LGNGLATSFWHDSWLNCGVL

Query:  ATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRNDS
        +  FPRLYRL   P + +   W +S  AWDL+LR NL ++E  EW  LS  L SV L +  DS
Subjt:  ATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRNDS

TrEMBL top hitse value%identityAlignment
A0A438D4H9 Transposon TX1 uncharacterized 149 kDa protein7.2e-2127.55Show/hide
Query:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRL--------
        E+ L  +  ++ +F   SGL +N +KS + GI+++++ L  L          + D   H + W  V  P  +GG+G+GN+  RNLALL K L        
Subjt:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRL--------

Query:  --------------------------------------------------GNGLATSFWHDSWLNCGVLATNFPRLYR-LTDCPRSLVGETWIASQTAWD
                                                          GNG    FW D W     L T +PRL+R + D   S+      +    W+
Subjt:  --------------------------------------------------GNGLATSFWHDSWLNCGVLATNFPRLYR-LTDCPRSLVGETWIASQTAWD

Query:  LSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLREDLVDYPNMAKDL-YKVIWTDFYPMKIKIFLWELSHGAINTAD
        L+ RRNL+D E E+   L   L  + L  +  D+ +WPL SS +FSVKS    L       ++   K +W    P K+K F+W ++H  +NT D
Subjt:  LSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLREDLVDYPNMAKDL-YKVIWTDFYPMKIKIFLWELSHGAINTAD

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.1e-2029.77Show/hide
Query:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI
        +D ++N+  I+ +FE ASGLNIN SKS +  I++     + +  ++G  +G                     D  +  I     +W   QL    G + +
Subjt:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI

Query:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW
         N    +L +    ++ +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W L + R L D E   W ++   L +  L NR     
Subjt:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW

Query:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD
        +W L S+NIF   S+++ L + P    N   +LYK +W   +P K K F+W L HG INTAD
Subjt:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.1e-2029.77Show/hide
Query:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI
        +D ++N+  I+ +FE ASGLNIN SKS +  I++     + +  ++G  +G                     D  +  I     +W   QL    G + +
Subjt:  EDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQG------------------TRGDGGMHNI-----NWATVQLPHLMGGVGI

Query:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW
         N    +L +    ++ +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W L + R L D E   W ++   L +  L NR     
Subjt:  GNLQNRNLALL-AKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLRRNLNDIETEEWMDLSLILSSVSLQNRN-DSW

Query:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD
        +W L S+NIF   S+++ L + P    N   +LYK +W   +P K K F+W L HG INTAD
Subjt:  IWPLESSNIFSVKSLREDLVDYP----NMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD

A0A6A2ZCZ2 Pescadillo homolog1.1e-2129.79Show/hide
Query:  LANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRN------LALLAKRLGNGLA
        L N+  ++ I+EL  GL +N +KS + GI++ E EL       GC +G               +   L+ G G GNL  +N         L  R GNG +
Subjt:  LANMFDIVKIFELASGLNINYSKSEVLGIHIEESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRN------LALLAKRLGNGLA

Query:  TSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQT--AWDLSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLRE--
          FW+D WL    L   FPRL+ L++     V E  + + +   WD+  +RNL D E E+W+ L  +L+S SL    +D W+W       F+ KS  +  
Subjt:  TSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQT--AWDLSLRRNLNDIETEEWMDLSLILSSVSLQ-NRNDSWIWPLESSNIFSVKSLRE--

Query:  -DLVDYPNMAKDLYKVIWTDFYPMKIKIFLWELSH
         D      +  +  + +W    P +++ F+W+L+H
Subjt:  -DLVDYPNMAKDLYKVIWTDFYPMKIKIFLWELSH

A0A6A2ZG37 Uncharacterized protein6.3e-2536.81Show/hide
Query:  GTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTA--WDLSLRRNL
        G+     +H +NW  V  P  +GG+GI NL   N ALL K +GNG    FWHDSWL    L   FPR++ L+      V E    S +   WD+ LRRNL
Subjt:  GTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTA--WDLSLRRNL

Query:  NDIETEEWMDLSLILSSVSLQN-RNDSWIWPLESSNIFSVKSLREDLVDYPNMAKD---LYKVIWTDFYPMKIKIFLWELSH
         D E E+WM L  +L+S SL + ++D W+W       FS KS  +   D+    +D      ++WT   P +++ F+W+ +H
Subjt:  NDIETEEWMDLSLILSSVSLQN-RNDSWIWPLESSNIFSVKSLREDLVDYPNMAKD---LYKVIWTDFYPMKIKIFLWELSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein9.3e-0535.79Show/hide
Query:  KGKPELVGKSALITRQLKGSGAKLLRRVQNLLTITQKQILVIMGAGSGGCP--VRLVEDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESE
        KG+ EL  K   ITRQ+KG GA+L RRVQ+L TI++ Q   I    S   P   ++ E +L +M ++++    A G   N  K ++  + I  +E
Subjt:  KGKPELVGKSALITRQLKGSGAKLLRRVQNLLTITQKQILVIMGAGSGGCP--VRLVEDALANMFDIVKIFELASGLNINYSKSEVLGIHIEESE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCAAGCGGGGTGAAACTTTTAGGAGAGGGCATGCCTACCCAATGTCAGGAAGGGAAGGGGAAGCCTGAATTGGTTGGGAAGTCAGCTTTGATAACGAGGCAGTT
GAAAGGATCTGGGGCAAAGCTTTTGAGGAGGGTGCAAAATTTGCTTACAATTACTCAAAAGCAAATTTTGGTAATTATGGGTGCTGGGTCTGGTGGTTGTCCTGTGAGAT
TAGTCGAGGATGCTTTGGCTAACATGTTCGATATTGTTAAAATTTTTGAGCTAGCTTCTGGATTGAATATTAACTATTCCAAGAGTGAGGTTCTGGGAATTCATATAGAG
GAGTCAGAATTGGAATGGTTGACAACTACGTTTGGCTGTAAACAAGGAACTAGAGGTGATGGTGGTATGCACAATATTAATTGGGCAACAGTACAACTTCCACATTTGAT
GGGGGGTGTTGGTATTGGTAACTTACAAAATCGCAATCTTGCTCTTCTTGCAAAAAGGTTGGGTAACGGTCTTGCTACTTCATTCTGGCATGATTCGTGGTTAAATTGCG
GTGTTCTGGCTACAAATTTTCCTCGTCTTTATCGTTTAACAGATTGTCCAAGGAGTTTGGTTGGTGAAACATGGATTGCTTCTCAAACAGCATGGGATCTGAGTCTTCGG
CGTAATTTAAACGATATAGAGACAGAGGAATGGATGGATTTATCACTTATTCTATCCTCTGTCAGCTTACAGAATCGTAATGATTCCTGGATATGGCCTCTGGAATCGTC
CAATATTTTTTCTGTTAAATCTCTCAGGGAAGACTTAGTAGACTATCCGAATATGGCAAAGGATCTATATAAGGTCATTTGGACAGATTTCTATCCAATGAAGATCAAGA
TTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGCTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCAAGCGGGGTGAAACTTTTAGGAGAGGGCATGCCTACCCAATGTCAGGAAGGGAAGGGGAAGCCTGAATTGGTTGGGAAGTCAGCTTTGATAACGAGGCAGTT
GAAAGGATCTGGGGCAAAGCTTTTGAGGAGGGTGCAAAATTTGCTTACAATTACTCAAAAGCAAATTTTGGTAATTATGGGTGCTGGGTCTGGTGGTTGTCCTGTGAGAT
TAGTCGAGGATGCTTTGGCTAACATGTTCGATATTGTTAAAATTTTTGAGCTAGCTTCTGGATTGAATATTAACTATTCCAAGAGTGAGGTTCTGGGAATTCATATAGAG
GAGTCAGAATTGGAATGGTTGACAACTACGTTTGGCTGTAAACAAGGAACTAGAGGTGATGGTGGTATGCACAATATTAATTGGGCAACAGTACAACTTCCACATTTGAT
GGGGGGTGTTGGTATTGGTAACTTACAAAATCGCAATCTTGCTCTTCTTGCAAAAAGGTTGGGTAACGGTCTTGCTACTTCATTCTGGCATGATTCGTGGTTAAATTGCG
GTGTTCTGGCTACAAATTTTCCTCGTCTTTATCGTTTAACAGATTGTCCAAGGAGTTTGGTTGGTGAAACATGGATTGCTTCTCAAACAGCATGGGATCTGAGTCTTCGG
CGTAATTTAAACGATATAGAGACAGAGGAATGGATGGATTTATCACTTATTCTATCCTCTGTCAGCTTACAGAATCGTAATGATTCCTGGATATGGCCTCTGGAATCGTC
CAATATTTTTTCTGTTAAATCTCTCAGGGAAGACTTAGTAGACTATCCGAATATGGCAAAGGATCTATATAAGGTCATTTGGACAGATTTCTATCCAATGAAGATCAAGA
TTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGCTGATTGA
Protein sequenceShow/hide protein sequence
MRASGVKLLGEGMPTQCQEGKGKPELVGKSALITRQLKGSGAKLLRRVQNLLTITQKQILVIMGAGSGGCPVRLVEDALANMFDIVKIFELASGLNINYSKSEVLGIHIE
ESELEWLTTTFGCKQGTRGDGGMHNINWATVQLPHLMGGVGIGNLQNRNLALLAKRLGNGLATSFWHDSWLNCGVLATNFPRLYRLTDCPRSLVGETWIASQTAWDLSLR
RNLNDIETEEWMDLSLILSSVSLQNRNDSWIWPLESSNIFSVKSLREDLVDYPNMAKDLYKVIWTDFYPMKIKIFLWELSHGAINTAD