; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017839 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017839
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold9:31797890..31799855
RNA-Seq ExpressionSpg017839
SyntenySpg017839
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.8e-2854.11Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPE +RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   S  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.7e-1540.6Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    +++SR +++ +R  K+QK K KKK+ + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS
         +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.8e-2854.11Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPE +RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   S  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]8.5e-2853.42Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPE +RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]9.1e-0641.33Show/hide
Query:  DFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS
        +F  P + +TLA++ P+ FL   Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]8.5e-2853.42Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPE +RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.7e-1540.6Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    +++SR +++ +R  K+QK K KKK+ + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS
         +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]8.5e-2853.42Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPE +RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.7e-1540.6Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    +++SR +++ +R  K+QK K KKK+ + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS
         +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein1.1e-0139.33Show/hide
Query:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQ
        SREK  SIE+++EGW +V RRKK+K +  +K+SR +R+ +R  K++K K KKK+++ K   E      C     T  E  P R L++ +
Subjt:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQ

A0A5A7TJZ7 Retrotransposon gag protein7.7e-2753.54Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPE +RI R+GK KV D+NHIT++E D  +EKE   QRTS F RI P VARA VF++LS+ EAE +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5A7UD46 Uncharacterized protein6.2e-0844.3Show/hide
Query:  EESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS
        EE +DF    + +TLA++FP RFL D Q E    V CH ++  E++ +P  S     V  DLS F++ DLLSLPQE K+
Subjt:  EESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKS

A0A5A7UMY2 Reverse transcriptase domain-containing protein1.6e-2755.12Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPE +RI R+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ EA+ +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3BSG5 Uncharacterized protein5.9e-2755.12Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPE +RI R+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ EAE +  Q T++  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3BSG5 Uncharacterized protein1.1e-2044.6Show/hide
Query:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        S+EK   IE+++EGWT+V RRKK+K +  +K+ R +R+ ++  K+QK K KKK+R+ K + EE +DF    + +TLA++FP RFL D Q E    V CH 
Subjt:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAK
        ++ +E++++P  S     V  DLS F++ DLLSLPQE K
Subjt:  VDVVEDDDVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAK

A0A5D3BSG5 Uncharacterized protein5.9e-2755.91Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+++P +RKGLGYKSPE +RI R+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF+RLS+ E E +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL+M    E+        TRPSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3DXC7 Reverse transcriptase domain-containing protein1.6e-2750.68Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        D  S  I +   L   +  KKLL+EG+ +P +RKGLGYKSPE +RI R+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE +  Q T++  + S F+RL++   +E+    T   T+PSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCGAGAAAAATATGTTTCCATTGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAAAGTCCCG
CCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTACTAGCTCCGCGGGAACGGTGGCAGTTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCT
AAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGATTGGGATATAAGTCGCCTGAGCTAGTTCGCATAATAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATA
TAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGA
TTAAGTGTCAATGAAGCGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATT
TTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCGAGAAAAATATGTTTCCATTGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAAAGTCCCG
CCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTACTAGCTCCGCGGGAACGGTGGCAGTTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCT
AAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGATTGGGATATAAGTCGCCTGAGCTAGTTCGCATAATAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATA
TAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGA
TTAAGTGTCAATGAAGCGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATT
TTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGAGGTTAA
Protein sequenceShow/hide protein sequence
MKGSREKYVSIEDENEGWTLVVRRKKQKQSYARKKSRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
DVPTSSAGTVAVPGDLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPELVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR
LSVNEAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRG