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Spg017860 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017860
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold9:35299863..35300312
RNA-Seq ExpressionSpg017860
SyntenySpg017860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4391669.1 hypothetical protein F8388_005434 [Cannabis sativa]5.5e-0531.06Show/hide
Query:  THALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPYL
        +HALWNC+KVK +W +  PS  L++D      G SM ++      KL +E+ E    +LW+IW  RNR   N      + L+  +   +  RE      L
Subjt:  THALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPYL

Query:  ASYSEESLRNDGVWTSPPPKLLEAECGRVLEP
        A     +  N   W +PP       C   L+P
Subjt:  ASYSEESLRNDGVWTSPPPKLLEAECGRVLEP

KAF4391976.1 hypothetical protein F8388_004305 [Cannabis sativa]1.2e-0429.32Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPY
        E+ +HALWNC+KVK +W +  PS   ++     G SM ++      KL +E+ E    +LW+IW  RNR   N    + + L+  +   +  RE      
Subjt:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPY

Query:  LASYSEESLRNDGVWTSPPPKLLEAECGRVLEP
        L      + +N   W +PP       C   L+P
Subjt:  LASYSEESLRNDGVWTSPPPKLLEAECGRVLEP

XP_021862236.1 uncharacterized protein LOC110801216 [Spinacia oleracea]2.1e-0430.77Show/hide
Query:  ARESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEV---WDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREK
        A ESSTHAL++C +V+ +W +   +     F+   G+ M E+   W  I +K      +KA  + W IWT RN   + N     ++L+  + R   E   
Subjt:  ARESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEV---WDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREK

Query:  RVNPYLASYSEESLRNDG-VWTSPPPKLLE
        R    +   S  + R  G VWT+PP  L++
Subjt:  RVNPYLASYSEESLRNDG-VWTSPPPKLLE

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.2e-0428.41Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKR
        E++ H LW CK +K IW    P      +I R   + +E W+W+  K  EE+  ++ I+   IW  RN+  +  + ++   +  +I R
Subjt:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKR

XP_026399261.1 uncharacterized protein LOC113295124 [Papaver somniferum]2.1e-0430.43Show/hide
Query:  ARESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVW--DWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKR
        A E   H   NC   + IW+ F    + D++   +G     +W   W+ SK+L E  +K + ++WSI  YRN VN++N+   P  L+ SIK  + + +  
Subjt:  ARESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVW--DWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKR

Query:  VNPYLASYSEESLRN
         +   + ++ +SLRN
Subjt:  VNPYLASYSEESLRN

TrEMBL top hitse value%identityAlignment
A0A2N9IX80 zf-RVT domain-containing protein9.2e-0634.88Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFIC--REGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIR
        ES THALW+C+  K++W     SL    F+C  ++  S  +V+D +   L  +DA     + W IW  RN +  + I  DPS++ R
Subjt:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFIC--REGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIR

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X16.0e-0528.41Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKR
        E++ H LW CK +K IW    P      +I R   + +E W+W+  K  EE+  ++ I+   IW  RN+  +  + ++   +  +I R
Subjt:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKR

A0A7J6H9M1 Uncharacterized protein6.0e-0529.32Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPY
        E+ +HALWNC+KVK +W +  PS   ++     G SM ++      KL +E+ E    +LW+IW  RNR   N    + + L+  +   +  RE      
Subjt:  ESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPY

Query:  LASYSEESLRNDGVWTSPPPKLLEAECGRVLEP
        L      + +N   W +PP       C   L+P
Subjt:  LASYSEESLRNDGVWTSPPPKLLEAECGRVLEP

A0A7J6HB13 CCHC-type domain-containing protein2.7e-0531.06Show/hide
Query:  THALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPYL
        +HALWNC+KVK +W +  PS  L++D      G SM ++      KL +E+ E    +LW+IW  RNR   N      + L+  +   +  RE      L
Subjt:  THALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPYL

Query:  ASYSEESLRNDGVWTSPPPKLLEAECGRVLEP
        A     +  N   W +PP       C   L+P
Subjt:  ASYSEESLRNDGVWTSPPPKLLEAECGRVLEP

A0A803PHH5 Uncharacterized protein9.2e-0631.11Show/hide
Query:  ESSTHALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVN
        E+ +HALWNC+KVK +W +  PS  L++D      G SM ++      KL +E+ E    +LW+IW  RNR   N      + L+  +   +  RE    
Subjt:  ESSTHALWNCKKVKAIWNEFFPS--LMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVN

Query:  PYLASYSEESLRNDGVWTSPPPKLLEAECGRVLEP
          LA     +  N   W +PP       C   L+P
Subjt:  PYLASYSEESLRNDGVWTSPPPKLLEAECGRVLEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGGGAATCCTCAACTCATGCCTTATGGAATTGTAAAAAGGTAAAAGCAATTTGGAATGAATTTTTTCCTAGCCTTATGGAAGATGTCTTCATTTGCAGGGA
GGGGCAGTCCATGGAAGAAGTTTGGGATTGGATCGCAAGCAAGCTCTTGGAGGAAGATGCGGAAAAGGCGGCAATTATGCTATGGTCGATTTGGACATACAGAAACAGAG
TAAACTACAACAATATCAAAGCAGACCCATCCATCCTCATCAGATCAATCAAAAGAGGTTGGGCGGAGCGAGAGAAAAGGGTAAACCCTTACCTTGCGTCCTACAGCGAG
GAGAGCCTCCGGAATGACGGGGTGTGGACCTCCCCCCCCCCCAAACTGCTTGAAGCTGAATGCGGACGCGTCTTGGAACCAAAGTCTGGAAAGAGGCGGTGTAGGTTGGG
TGCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTCGGGAATCCTCAACTCATGCCTTATGGAATTGTAAAAAGGTAAAAGCAATTTGGAATGAATTTTTTCCTAGCCTTATGGAAGATGTCTTCATTTGCAGGGA
GGGGCAGTCCATGGAAGAAGTTTGGGATTGGATCGCAAGCAAGCTCTTGGAGGAAGATGCGGAAAAGGCGGCAATTATGCTATGGTCGATTTGGACATACAGAAACAGAG
TAAACTACAACAATATCAAAGCAGACCCATCCATCCTCATCAGATCAATCAAAAGAGGTTGGGCGGAGCGAGAGAAAAGGGTAAACCCTTACCTTGCGTCCTACAGCGAG
GAGAGCCTCCGGAATGACGGGGTGTGGACCTCCCCCCCCCCCAAACTGCTTGAAGCTGAATGCGGACGCGTCTTGGAACCAAAGTCTGGAAAGAGGCGGTGTAGGTTGGG
TGCTCTGTGA
Protein sequenceShow/hide protein sequence
MAARESSTHALWNCKKVKAIWNEFFPSLMEDVFICREGQSMEEVWDWIASKLLEEDAEKAAIMLWSIWTYRNRVNYNNIKADPSILIRSIKRGWAEREKRVNPYLASYSE
ESLRNDGVWTSPPPKLLEAECGRVLEPKSGKRRCRLGAL