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Spg017880 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017880
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationscaffold9:33673665..33674149
RNA-Seq ExpressionSpg017880
SyntenySpg017880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]3.4e-2177.33Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG
        ML+SF  RFIL LT+VLAL S+S++AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLPAKDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG

KAF4387201.1 hypothetical protein F8388_008835 [Cannabis sativa]1.3e-1260.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]4.5e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        ML S+R ++ L+  +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2177.5Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPA--KDGKFQ
        M +SFR RFI +L +VLALAS+SSEAAR+P +YWEQMLPKKLPTPSSAPSKGTNSVA SS K VKVDGNLPA  KDG F+
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPA--KDGKFQ

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]4.4e-2176Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG
        ML++F  RFIL LT++LAL S+SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLPAKDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG

TrEMBL top hitse value%identityAlignment
A0A2P5W5E0 Uncharacterized protein1.8e-1261.84Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        MLVS R + +L+L ++  +  + SEA+R P+ YWEQMLPKKLPTPSS+PSKGTNSV  S+SKAVK D +LP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR52.2e-2176Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG
        ML++F  RFIL LT++LAL S+SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLPAKDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDG

A0A7J6GWN4 Uncharacterized protein6.3e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

A0A7J6I408 Uncharacterized protein2.2e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        ML S+R ++ L+  +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

A0A803PR73 Uncharacterized protein6.3e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTCTTTCAGGGTTAGATTCATCTTGGTCTTAACCGTCGTGCTCGCCCTCGCCTCCGTGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAGCAGAT
GTTGCCGAAGAAGCTACCGACGCCGTCCTCGGCACCGTCGAAAGGGACGAATTCCGTGGCTCCTTCGTCTTCTAAAGCTGTGAAAGTTGATGGGAACCTACCTGCGAAGG
ACGGAAAGTTTCAGAAGGTATATATATATTATTCCAACCTCTCAAATAATTTCTCGTCGGTAAGAGCTGCAAGTCGGGATTCCGATGAGGGAGGAGGCGGCAACGCGGTG
GCGGGTGGTGGAGCTCCTGGCTCGGTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTCTTTCAGGGTTAGATTCATCTTGGTCTTAACCGTCGTGCTCGCCCTCGCCTCCGTGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAGCAGAT
GTTGCCGAAGAAGCTACCGACGCCGTCCTCGGCACCGTCGAAAGGGACGAATTCCGTGGCTCCTTCGTCTTCTAAAGCTGTGAAAGTTGATGGGAACCTACCTGCGAAGG
ACGGAAAGTTTCAGAAGGTATATATATATTATTCCAACCTCTCAAATAATTTCTCGTCGGTAAGAGCTGCAAGTCGGGATTCCGATGAGGGAGGAGGCGGCAACGCGGTG
GCGGGTGGTGGAGCTCCTGGCTCGGTGGCTTGA
Protein sequenceShow/hide protein sequence
MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPAKDGKFQKVYIYYSNLSNNFSSVRAASRDSDEGGGGNAV
AGGGAPGSVA