| GenBank top hits | e value | %identity | Alignment |
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| KAA0046492.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] | 7.2e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 7.2e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 1.2e-71 | 97.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 1.1e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 2.5e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDD AKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 3.5e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A5D3BGF1 U6 snRNA-associated Sm-like protein LSm4 | 3.5e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 7.8e-72 | 96.48 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP G+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDG+KA+SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 5.4e-73 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 5.4e-73 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDG GGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 3.2e-54 | 82.58 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKG
G +DG A+G GRG G + G G+G
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.6e-59 | 83.57 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: -GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPG
GR+D + GR KG+GRG DDG + GRGKGGP K G
Subjt: -GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.4e-57 | 82.98 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
Query: RGREDGSGGRP-AKGMGRGFDDGAKATSGGRGKGGPGGKPG
RG G +P +G+GRG DDG GGRG+GG GGK G
Subjt: RGREDGSGGRP-AKGMGRGFDDGAKATSGGRGKGGPGGKPG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 2.0e-40 | 64.29 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
++ GR G GRG F + G G+G P KPG
Subjt: GREDGSGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 4.7e-58 | 83.57 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
GRE+GSG R +G GR AKA RG+G GK G
Subjt: GREDGSGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.5e-11 | 34.06 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
Query: GRGRGREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGP
GRG R G+PA G GRG +GGRG P
Subjt: GRGRGREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 5.8e-11 | 32.84 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGP
AKG GRG T GGRG P
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 4.6e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGSGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGSGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 9.5e-06 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
Query: GRGREDGSGGR
GRGR G GGR
Subjt: GRGREDGSGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 2.2e-55 | 82.58 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKG
G +DG A+G GRG G + G G+G
Subjt: GREDGSGGRPAKGMGRGFDDGAKATSGGRGKG
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