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Spg017898 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017898
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationscaffold9:33367356..33368118
RNA-Seq ExpressionSpg017898
SyntenySpg017898
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038601.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.6e-0543.33Show/hide
Query:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATANVDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYLLETL
        T  VENVLRRLFHEY+ G                 S+    + D++ D ET     D + +Y I   FK+VETT+ DKESEID+YLL++L
Subjt:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATANVDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYLLETL

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]3.2e-0846.15Show/hide
Query:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA-------------NVDLRFD-DETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYL
        T  VENVLRRLFHEY+ G +S + +S S   S+S SASA+A             ++D   D D   D++ D + +Y I   FK+VETT+ DKESEID+YL
Subjt:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA-------------NVDLRFD-DETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYL

Query:  LETL
        L++L
Subjt:  LETL

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]6.5e-0947.62Show/hide
Query:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA--------NVDLRFDDETMDLD------EDENFNYDIIPQFKNVETTSFDKESEIDIYL
        T  VEN LRRLFHEY+ G +S + +S S   S+S SASA+A        + D    D  MD+D       D + +Y I   FK+VETT+ DKESEID+YL
Subjt:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA--------NVDLRFDDETMDLD------EDENFNYDIIPQFKNVETTSFDKESEIDIYL

Query:  LETLA
        LE+LA
Subjt:  LETLA

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]2.6e-0544.25Show/hide
Query:  VENVLRRLFHEYSTGAASVSVSSGSG--------GGSSSASASATAN------------------VDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFD
        VENVLRRLFHEY+ G  S S +S S         G S+SASA   AN                  VD+  D E  +L+ +   +Y I   FK  ETT+FD
Subjt:  VENVLRRLFHEYSTGAASVSVSSGSG--------GGSSSASASATAN------------------VDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFD

Query:  KESEIDIYLLETL
        KESEID+YLLE+L
Subjt:  KESEIDIYLLETL

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]2.6e-0544.25Show/hide
Query:  VENVLRRLFHEYSTGAASVSVSSGSG--------GGSSSASASATAN------------------VDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFD
        VENVLRRLFHEY+ G  S S +S S         G S+SASA   AN                  VD+  D E  +L+ +   +Y I   FK  ETT+FD
Subjt:  VENVLRRLFHEYSTGAASVSVSSGSG--------GGSSSASASATAN------------------VDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFD

Query:  KESEIDIYLLETL
        KESEID+YLLE+L
Subjt:  KESEIDIYLLETL

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like1.6e-0846.15Show/hide
Query:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA-------------NVDLRFD-DETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYL
        T  VENVLRRLFHEY+ G +S + +S S   S+S SASA+A             ++D   D D   D++ D + +Y I   FK+VETT+ DKESEID+YL
Subjt:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATA-------------NVDLRFD-DETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYL

Query:  LETL
        L++L
Subjt:  LETL

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-0543.33Show/hide
Query:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATANVDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYLLETL
        T  VENVLRRLFHEY+ G                 S+    + D++ D ET     D + +Y I   FK+VETT+ DKESEID+YLL++L
Subjt:  TASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATANVDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYLLETL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCTTCAGTAGAGAATGTTTTGAGACGTCTCTTTCATGAATATAGTACTGGAGCTGCATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTGGTAGTAGTAGTGCTAG
TGCTAGCGCTACTGCTAATGTTGATTTGAGATTTGATGATGAAACAATGGACCTAGATGAGGATGAAAACTTCAACTATGATATAATACCTCAGTTCAAAAATGTTGAGA
CCACAAGTTTTGATAAGGAATCAGAGATTGATATATATTTGTTGGAAACTCTTGCTAAAGATAGATTCCAACCAATTGTGGATGAAGAAAAGAAAGTGGATCAAGTGGAG
CAGTTTGCAAAGTTGCAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGCTTCAGTAGAGAATGTTTTGAGACGTCTCTTTCATGAATATAGTACTGGAGCTGCATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTGGTAGTAGTAGTGCTAG
TGCTAGCGCTACTGCTAATGTTGATTTGAGATTTGATGATGAAACAATGGACCTAGATGAGGATGAAAACTTCAACTATGATATAATACCTCAGTTCAAAAATGTTGAGA
CCACAAGTTTTGATAAGGAATCAGAGATTGATATATATTTGTTGGAAACTCTTGCTAAAGATAGATTCCAACCAATTGTGGATGAAGAAAAGAAAGTGGATCAAGTGGAG
CAGTTTGCAAAGTTGCAGATTTGA
Protein sequenceShow/hide protein sequence
MTASVENVLRRLFHEYSTGAASVSVSSGSGGGSSSASASATANVDLRFDDETMDLDEDENFNYDIIPQFKNVETTSFDKESEIDIYLLETLAKDRFQPIVDEEKKVDQVE
QFAKLQI