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Spg017958 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017958
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationscaffold9:30298663..30301503
RNA-Seq ExpressionSpg017958
SyntenySpg017958
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038601.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.3e-0542.42Show/hide
Query:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYLLETLAKDSS
        T  VENVLRRLFHEY+ G +S  F                     + D++ D ET     D + +Y I   FK VETT+ DKESEIDVYLL++L    S
Subjt:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYLLETLAKDSS

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]1.9e-0747.71Show/hide
Query:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASAN---------VDLRFD-DETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYL
        T  VENVLRRLFHEY+ G +S   +S S    +S SASASA   AN         +D   D D   D++ D + +Y I   FK VETT+ DKESEIDVYL
Subjt:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASAN---------VDLRFD-DETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYL

Query:  LETLAKDSS
        L++L    S
Subjt:  LETLAKDSS

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]1.7e-0849.54Show/hide
Query:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFD----DETMDLD------EDENYNYDIIPQFKSVETTSFDKESEIDVYL
        T  VEN LRRLFHEY+ G +S   +S S    +S SASASA   AN    +D    D  MD+D       D + +Y I   FK VETT+ DKESEIDVYL
Subjt:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFD----DETMDLD------EDENYNYDIIPQFKSVETTSFDKESEIDVYL

Query:  LETLAKDSS
        LE+LA   S
Subjt:  LETLAKDSS

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]6.0e-0643.22Show/hide
Query:  VENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASA----------------------NVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFD
        VENVLRRLFHEY+ G  S   +S S    +S S   SASASA                      +VD+  D E  +L+ +   +Y I   FK  ETT+FD
Subjt:  VENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASA----------------------NVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFD

Query:  KESEIDVYLLETLAKDSS
        KESEIDVYLLE+L    S
Subjt:  KESEIDVYLLETLAKDSS

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]6.0e-0643.22Show/hide
Query:  VENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASA----------------------NVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFD
        VENVLRRLFHEY+ G  S   +S S    +S S   SASASA                      +VD+  D E  +L+ +   +Y I   FK  ETT+FD
Subjt:  VENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASA----------------------NVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFD

Query:  KESEIDVYLLETLAKDSS
        KESEIDVYLLE+L    S
Subjt:  KESEIDVYLLETLAKDSS

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like9.0e-0847.71Show/hide
Query:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASAN---------VDLRFD-DETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYL
        T  VENVLRRLFHEY+ G +S   +S S    +S SASASA   AN         +D   D D   D++ D + +Y I   FK VETT+ DKESEIDVYL
Subjt:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASAN---------VDLRFD-DETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYL

Query:  LETLAKDSS
        L++L    S
Subjt:  LETLAKDSS

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.1e-0542.42Show/hide
Query:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYLLETLAKDSS
        T  VENVLRRLFHEY+ G +S  F                     + D++ D ET     D + +Y I   FK VETT+ DKESEIDVYLL++L    S
Subjt:  TSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYLLETLAKDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTTCAGTAGAGAATGTTTTGAGACGTCTTTTTCATGAATATAGTACTGGAGCTGCATCTGTTTGTTTTAGTAGTGGGAGTGGTGGTGGTGGTAGTAGTGCTAG
TGCTAGTGCTAGTGCTAGTGCTAGTGCTAATGTTGATTTGAGATTTGATGATGAAACAATGGACCTAGATGAGGATGAAAACTACAACTATGATATAATACCTCAGTTCA
AAAGTGTTGAGACCACAAGTTTTGATAAGGAGTCAGAGATTGATGTATATTTGTTGGAAACTCTTGCTAAAGATAGTAGTGTTGGGTTTTATGTCCTAAAACTCGTAGAT
AGTGAATGTCCATTAGGTCCCACTGAATTTTCCAGCGATCACAAGACAAAGGAGGCTGCTGCGTTTTGTTCGTTGGAGCATCGTTGGCGACGAACGGTCAAGTCTACAAC
GGAGATTCTGCCTCCAGACGCAACAGCGTCGGGACGCTACCTCAACAGCGTCTCGACGCTGTCTCGATACCGCAGGCGCCAGATATGGAAAGCGCACAGCGTCGAGACGC
TATCAACACAGTGTCGAGACGCTGTCACGATGGCGGCGCGCATTAGGGCTTCAACAGGCGCGGTTCAAGCTGTGGGCGGTCCGGTTCAGACCGGTTCGGCTGGGCTGGGA
CCTATTTGGTTCGGTTCAGCCAATTTTTGGCATGGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTTCAGTAGAGAATGTTTTGAGACGTCTTTTTCATGAATATAGTACTGGAGCTGCATCTGTTTGTTTTAGTAGTGGGAGTGGTGGTGGTGGTAGTAGTGCTAG
TGCTAGTGCTAGTGCTAGTGCTAGTGCTAATGTTGATTTGAGATTTGATGATGAAACAATGGACCTAGATGAGGATGAAAACTACAACTATGATATAATACCTCAGTTCA
AAAGTGTTGAGACCACAAGTTTTGATAAGGAGTCAGAGATTGATGTATATTTGTTGGAAACTCTTGCTAAAGATAGTAGTGTTGGGTTTTATGTCCTAAAACTCGTAGAT
AGTGAATGTCCATTAGGTCCCACTGAATTTTCCAGCGATCACAAGACAAAGGAGGCTGCTGCGTTTTGTTCGTTGGAGCATCGTTGGCGACGAACGGTCAAGTCTACAAC
GGAGATTCTGCCTCCAGACGCAACAGCGTCGGGACGCTACCTCAACAGCGTCTCGACGCTGTCTCGATACCGCAGGCGCCAGATATGGAAAGCGCACAGCGTCGAGACGC
TATCAACACAGTGTCGAGACGCTGTCACGATGGCGGCGCGCATTAGGGCTTCAACAGGCGCGGTTCAAGCTGTGGGCGGTCCGGTTCAGACCGGTTCGGCTGGGCTGGGA
CCTATTTGGTTCGGTTCAGCCAATTTTTGGCATGGTTCGTGA
Protein sequenceShow/hide protein sequence
MTSSVENVLRRLFHEYSTGAASVCFSSGSGGGGSSASASASASASANVDLRFDDETMDLDEDENYNYDIIPQFKSVETTSFDKESEIDVYLLETLAKDSSVGFYVLKLVD
SECPLGPTEFSSDHKTKEAAAFCSLEHRWRRTVKSTTEILPPDATASGRYLNSVSTLSRYRRRQIWKAHSVETLSTQCRDAVTMAARIRASTGAVQAVGGPVQTGSAGLG
PIWFGSANFWHGS