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Spg017965 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017965
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:30108589..30109568
RNA-Seq ExpressionSpg017965
SyntenySpg017965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605668.1 hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2565.35Show/hide
Query:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAIHSNTHTQQNFMLQKNATVDE-------PEPDRCMNFNCS---
        MADS +LE+AAEAASSTLFIFC FNLI+LIILFTS PV SS  HQN D  D+PLSI IHSNT+ QQNFMLQKNA VD         EPD   +   S   
Subjt:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAIHSNTHTQQNFMLQKNATVDE-------PEPDRCMNFNCS---

Query:  --DNVEDDDHEEDEEDFRRRVEEFIEK
          D  ED+D  EDEEDF+RRVEEFIEK
Subjt:  --DNVEDDDHEEDEEDFRRRVEEFIEK
XP_031742158.1 probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]1.3e-2360.61Show/hide
Query:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAIHSNTH-TQQNFMLQKNATV-------DEPEPDRCMNFNCSDN
        MADS +LE+AA+A SSTLFIFC FNLIIL+I FTS P  SSF  QN DD DMPLSI IHS T+ T+QN MLQK+  V        + E +RC+NFNC+ +
Subjt:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAIHSNTH-TQQNFMLQKNATV-------DEPEPDRCMNFNCSDN

Query:  VE--DDDHE-------EDEEDFRRRVEEFIEK
        VE  DDD+E       EDE+DFR+RVEEFIEK
Subjt:  VE--DDDHE-------EDEEDFRRRVEEFIEK
TrEMBL top hitse value%identityAlignment
A0A445F8B4 Uncharacterized protein9.4e-0437.5Show/hide
Query:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAI---------HSNTHTQQNFMLQKNA----TVDEPEPDRCMNF
        M DS V+E   +AASS  FIFC  NLII+IIL    P  S           MP +I I         + NT + Q   + ++A     VD+ E +   N 
Subjt:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAI---------HSNTHTQQNFMLQKNA----TVDEPEPDRCMNF

Query:  NCSDNVEDDDHEEDEEDFRRRVEEFIEK
        NC+   EDDD      + +RRVEEFIE+
Subjt:  NCSDNVEDDDHEEDEEDFRRRVEEFIEK
K7N4U7 Uncharacterized protein9.4e-0437.5Show/hide
Query:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAI---------HSNTHTQQNFMLQKNA----TVDEPEPDRCMNF
        M DS V+E   +AASS  FIFC  NLII+IIL    P  S           MP +I I         + NT + Q   + ++A     VD+ E +   N 
Subjt:  MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAI---------HSNTHTQQNFMLQKNA----TVDEPEPDRCMNF

Query:  NCSDNVEDDDHEEDEEDFRRRVEEFIEK
        NC+   EDDD      + +RRVEEFIE+
Subjt:  NCSDNVEDDDHEEDEEDFRRRVEEFIEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCTTTCGTTTTGGAAGTTGCTGCTGAGGCAGCTTCCAGCACTCTGTTCATCTTCTGCTGCTTCAATTTGATCATACTCATCATTCTCTTCACCTCAAGCCC
AGTCTTTTCCAGCTTTCATCACCAAAATGGTGACGATTTTGATATGCCACTTTCAATTGCCATTCACAGCAACACACATACACAACAGAACTTCATGCTTCAGAAAAATG
CCACAGTTGATGAACCAGAACCAGACAGATGTATGAATTTCAACTGCAGTGATAATGTTGAAGATGATGATCATGAGGAGGATGAGGAGGATTTCAGAAGAAGAGTGGAA
GAGTTTATTGAAAAGGGATTTTTACTGGTTGCAATTTTGTTTCCTGGGGGTGCCAAACGACATCGAATTCATTATTTCCAAATAAGAACACTTCAGGGCAGGGATTCTAA
TCCTTTTGCAGATCTTAGTAGTTATGATGATCTAAATCTACAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTCTTTCGTTTTGGAAGTTGCTGCTGAGGCAGCTTCCAGCACTCTGTTCATCTTCTGCTGCTTCAATTTGATCATACTCATCATTCTCTTCACCTCAAGCCC
AGTCTTTTCCAGCTTTCATCACCAAAATGGTGACGATTTTGATATGCCACTTTCAATTGCCATTCACAGCAACACACATACACAACAGAACTTCATGCTTCAGAAAAATG
CCACAGTTGATGAACCAGAACCAGACAGATGTATGAATTTCAACTGCAGTGATAATGTTGAAGATGATGATCATGAGGAGGATGAGGAGGATTTCAGAAGAAGAGTGGAA
GAGTTTATTGAAAAGGGATTTTTACTGGTTGCAATTTTGTTTCCTGGGGGTGCCAAACGACATCGAATTCATTATTTCCAAATAAGAACACTTCAGGGCAGGGATTCTAA
TCCTTTTGCAGATCTTAGTAGTTATGATGATCTAAATCTACAATGGTGA
Protein sequenceShow/hide protein sequence
MADSFVLEVAAEAASSTLFIFCCFNLIILIILFTSSPVFSSFHHQNGDDFDMPLSIAIHSNTHTQQNFMLQKNATVDEPEPDRCMNFNCSDNVEDDDHEEDEEDFRRRVE
EFIEKGFLLVAILFPGGAKRHRIHYFQIRTLQGRDSNPFADLSSYDDLNLQW