; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg017966 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg017966
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease P
Genome locationscaffold9:25733209..25734218
RNA-Seq ExpressionSpg017966
SyntenySpg017966
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030677 - ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]1.8e-6785.62Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+RFKNRY+V EVLLDPNKD+   DPIIITQYNVSKAIKDSILLNFG CGFAS+LGSFQV YVNPITK+CIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDLSGNTRACKNTALRL+ LKFE+YKLMVG +L D+VN QM NCLEKI TLE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

XP_022932062.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata]7.3e-6986.27Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+ FKNRYLV EV+LDPNKD+A  DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDL+GN+RACKNTALRLDELKFE+YKLMVGP +SD VN QM NCLEKI++L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]4.3e-6986.27Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+ FKNRYLV EV+LDPNKD+A  DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP +SD VN QM NCLEKI+TL+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

XP_023524475.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita pepo subsp. pepo]8.7e-7086.93Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+ FKNRYLV EV LDPNKD+A  DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP++SD VN QMHNCLEKI+TL+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]1.1e-6988.89Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+RFKNRY+VLEVLLDPNKD+   DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDLSGNTRACKNTALRLD+LKFE+YKLMVG  L D+VN QM NCLEKI TLE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

TrEMBL top hitse value%identityAlignment
A0A1S3CEI9 Ribonuclease P1.8e-6584.31Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+RFKNRY+V EVLLDPNK++   DPIIITQYNVSKAIKDSILLNFG CGFAS+LGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDLSGNTRACKNTALRLD LKFE+YKLMVG  L D+V   M NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

A0A5D3CDD4 Ribonuclease P2.2e-6684.97Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+RFKNRY+V EVLLDPNK++   DPIIITQYNVSKAIKDSILLNFG CGFAS+LGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDLSGNTRACKNTALRLD LKFE+YKLMVG  L D+V  QM NCLEKI  LE
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

A0A6J1CLH1 Ribonuclease P2.0e-6481.46Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+R++NRYL+LEV+LDP KD A  D IIITQYN+SKAIKDSILLNFG CGFAS+LGSFQV YVNPITKLCIIR S+EDYQ VWAAITMVRTI NCPV+FN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKT
        LLDL+GNTRACKNTALR +ELKFE+YKLMVG  LSDDVN QM NCLEKI+T
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKT

A0A6J1EVL4 Ribonuclease P3.6e-6986.27Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+ FKNRYLV EV+LDPNKD+A  DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDL+GN+RACKNTALRLDELKFE+YKLMVGP +SD VN QM NCLEKI++L+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

A0A6J1IBH7 Ribonuclease P2.1e-6986.27Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+ FKNRYLV EV+LDPNKD+A  DPIIITQYNVSKAIKDSILLNFG CGFASSLGSFQV YVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        LLDL+GN+RACKNTALR+DELKFE+YKLMVGP +SD VN QM NCLEKI+TL+
Subjt:  LLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

SwissProt top hitse value%identityAlignment
Q54EP3 Probable ribonuclease P/MRP protein subunit POP59.5e-1128.81Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN
        M+R KNRYL+ EV+   N+         + Q+ +S  +K+ +    G   + +   + ++ YVNP T + IIR S E Y+++W A+T++ +    P+ F 
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFN

Query:  LLDLSGNTRACKNTALRL
        ++ + G+ R C+  A+++
Subjt:  LLDLSGNTRACKNTALRL

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP58.2e-4760.39Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAY-DPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        M+ FKNRY+++EV LDP+KD+     PII+TQ+N+SKAIKDSIL+NFG CG  SSLGSFQV YVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAY-DPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        NLLD+SG  RAC++TAL+ D+ KFE+        LS++  +QM+  LEKIK LE
Subjt:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE

Q969H6 Ribonuclease P/MRP protein subunit POP51.2e-0831.03Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISN----CP
        M+RFK+RYL+ E++ D  +   + D  ++     S  ++D+I    G  G A+    F V Y+N  T + ++R  +E YQ VW+A+  +  + N     P
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISN----CP

Query:  VVFNLLDLSGNTRACK
          FN L + G  R C+
Subjt:  VVFNLLDLSGNTRACK

Q9DB28 Ribonuclease P/MRP protein subunit POP51.3e-0729.31Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISN----CP
        M+RFK+RYL+ E++ +  +   + D  ++        ++D+I    GA G A+    F V Y+N  T + ++R  ++ YQ VW+A+  +  + N     P
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISN----CP

Query:  VVFNLLDLSGNTRACK
          FN L + G  R C+
Subjt:  VVFNLLDLSGNTRACK

Q9UU90 Ribonuclease P/MRP protein subunit POP52.7e-1331.62Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAYDPI----IITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCP
        M+RFK+RYL+ EVL    K+   Y  I     IT  ++SK I+  +  NFG  G      S  V Y +P T   I+R SR+ ++  WAA+ ++R +   P
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAYDPI----IITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCP

Query:  VVFNLLDLSGNTRACKNTALRLDELKFERYKLMVGP
        V+  ++ +SG  +  +  A+  ++ +     LM  P
Subjt:  VVFNLLDLSGNTRACKNTALRLDELKFERYKLMVGP

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein5.8e-4860.39Show/hide
Query:  MLRFKNRYLVLEVLLDPNKDIAAY-DPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF
        M+ FKNRY+++EV LDP+KD+     PII+TQ+N+SKAIKDSIL+NFG CG  SSLGSFQV YVNPITKLCI+R+SRE+++ VW AIT+V++I NCPV+ 
Subjt:  MLRFKNRYLVLEVLLDPNKDIAAY-DPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE
        NLLD+SG  RAC++TAL+ D+ KFE+        LS++  +QM+  LEKIK LE
Subjt:  NLLDLSGNTRACKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGTTTAAGAACCGATACTTGGTGCTCGAAGTTCTGTTGGATCCCAATAAAGACATTGCAGCATATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGCATTCTTCTCAACTTCGGAGCGTGTGGTTTTGCGTCCTCACTTGGATCTTTTCAAGTTAGTTATGTAAATCCAATCACGAAGTTGTGTATTATTAGAG
CCTCGAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACCATGGTGAGGACTATCAGCAATTGCCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAGGGCT
TGCAAAAACACTGCCTTGAGGTTGGATGAATTGAAGTTTGAGCGATACAAGCTTATGGTTGGACCTCATCTCTCTGATGATGTCAATCAGCAAATGCACAACTGTCTTGA
GAAGATAAAAACTTTAGAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGTTTAAGAACCGATACTTGGTGCTCGAAGTTCTGTTGGATCCCAATAAAGACATTGCAGCATATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGCATTCTTCTCAACTTCGGAGCGTGTGGTTTTGCGTCCTCACTTGGATCTTTTCAAGTTAGTTATGTAAATCCAATCACGAAGTTGTGTATTATTAGAG
CCTCGAGAGAGGACTACCAAAATGTCTGGGCTGCAATTACCATGGTGAGGACTATCAGCAATTGCCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAGGGCT
TGCAAAAACACTGCCTTGAGGTTGGATGAATTGAAGTTTGAGCGATACAAGCTTATGGTTGGACCTCATCTCTCTGATGATGTCAATCAGCAAATGCACAACTGTCTTGA
GAAGATAAAAACTTTAGAGCAGTGA
Protein sequenceShow/hide protein sequence
MLRFKNRYLVLEVLLDPNKDIAAYDPIIITQYNVSKAIKDSILLNFGACGFASSLGSFQVSYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFNLLDLSGNTRA
CKNTALRLDELKFERYKLMVGPHLSDDVNQQMHNCLEKIKTLEQ