; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018012 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018012
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold9:26345830..26347737
RNA-Seq ExpressionSpg018012
SyntenySpg018012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]7.4e-2856.15Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+S+P +RKGLGYK PEP+RIT++ K KV DINHIT+EE D++  KE  +Q+  VF RIRP VAR +VF+RL + E E E  Q   S  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        RRL+    +EEST      TRPSAF RL +
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.4e-1842.25Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +Q+ +R  K+Q+ K KKKT + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
         +P  S        DLS F+++DLLSLPQE K++ IDAL+ S
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]7.4e-2856.15Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+S+P +RKGLGYK PEP+RIT++ K KV DINHIT+EE D++  KE  +Q+  VF RIRP VAR +VF+RL + E E E  Q   S  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        RRL+    +EEST      TRPSAF RL +
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.7e-2755.38Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+S+P +RKGLGYK PEP+RIT++ K KV DINHIT+EE D++  KE  +Q+  VF RIRP VAR +VF+RL + E E E  Q   +  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        RRL+    +EEST      TRPSAF RL +
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.9e-0741.67Show/hide
Query:  DFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
        +F  P + +TLA++ P+ FL   Q E  E V CH ++  E++ +P  S        DLS F+++DLLSLPQE K++ IDAL+ S
Subjt:  DFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.7e-2755.38Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+S+P +RKGLGYK PEP+RIT++ K KV DINHIT+EE D++  KE  +Q+  VF RIRP VAR +VF+RL + E E E  Q   +  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        RRL+    +EEST      TRPSAF RL +
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.4e-1842.25Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +Q+ +R  K+Q+ K KKKT + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
         +P  S        DLS F+++DLLSLPQE K++ IDAL+ S
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.7e-2755.38Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+S+P +RKGLGYK PEP+RIT++ K KV DINHIT+EE D++  KE  +Q+  VF RIRP VAR +VF+RL + E E E  Q   +  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        RRL+    +EEST      TRPSAF RL +
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.4e-1842.25Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +Q+ +R  K+Q+ K KKKT + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
         +P  S        DLS F+++DLLSLPQE K++ IDAL+ S
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein2.0e-2653.08Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+++P +RKGLGYK PEP+RITR+ K KV D NHITV+EVD  +EKE   Q+T  F RI P VAR  VF+RL + E E +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        +RL+M   +E+        TRPSAF RL+M
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

A0A5A7TJZ7 Retrotransposon gag protein2.9e-0934.23Show/hide
Query:  SQEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHI
        S+EK  SIE+++EGW +V RRKK+K +  +KESR +++ +R  K+++ K KKKT + K                                E L  V CH 
Subjt:  SQEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHI

Query:  VDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
        ++  E++ +P  S        DLS F++ DLLSLPQ+ K + I+AL+ S
Subjt:  VDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

A0A5A7TJZ7 Retrotransposon gag protein2.0e-2652.31Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+ +P +RKGLGYK PEP+RITR+ K KV D NHITV+EVD   EKE  +Q+T  F RI P VARA VF+RL + E + +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        +RL++   EE+    T   T+PSAF RL++
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

A0A5A7UD46 Uncharacterized protein9.8e-2650.77Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+ +P +RKGLGYK PEP+RITR+ K KV D NHIT++E D   EKE   Q+T  F RI P VARA VF++L + E E +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        +RL++   EE+    T   T+PSAF RL++
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

A0A5A7UD46 Uncharacterized protein4.1e-0842.05Show/hide
Query:  EESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES
        EE +DF    + +TLA++FP  FL D Q E    V CH ++  E++ +P  S        DLS F++ DLLSLPQE K++ I+AL+ S
Subjt:  EESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMES

A0A5A7UD46 Uncharacterized protein8.3e-2550Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+++P +RKGLGYK PEP+RIT + K KV D NHITV+EVD   EKE   Q+T  F RI P V RA VF+RL + E E +  Q T++  + S F
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        +RL++   EE+        T+PSAF RL++
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

A0A5D3DXC7 Reverse transcriptase domain-containing protein1.5e-2652.31Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF
        KKLL+EG+ +P +RKGLGYK PEP+RITR+ K KV D NHITV+EVD   EKE  +Q+T  F RI P VARA VF+RL + E E +  Q T++  + S F
Subjt:  KKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVEEVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVF

Query:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM
        +RL++   EE+    T   T+PSAF RL++
Subjt:  RRLSMFIGEEESTLSTPDVTRPSAFRRLNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAATGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCG
CCTATTTCAAGATAGTAAAAGAAAGGTTAAGTCTCAAAGGAAGAAAGGAAAAAAAAAGACAATGAGGTCAAAACCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAACGAGAAGCACTTGAAACTGTCACATGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAAGACTTATTGTCACTTCCTCAGGAAGCTAAAAGTGTCTTTATTGA
TGCGTTGATGGAGTCTGTTGTTGAAGACGTGGAGGCTTCTGACCTGAAAAAGAGTGAAACATGTACAAGCCTTGTGAAACATGAAGCTAAGAAGCTTCTAAAAGAAGGTT
ATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCCGAGCCGGTTCGCATAACAAGAAGATGGAAGACAAAAGTGGCAGACATAAATCATATAACAGTAGAG
GAGGTTGATGACTCAAGAGAAAAAGAGAGCATTGACCAAAAAACTTTTGTTTTTAGGCGCATCAGGCCACTAGTTGCTCGTGCTTTAGTCTTTCAGAGGTTAATTGTGAA
TGAAACAGAAGAAGAAAGTGCACAACCTACCAATAGCCCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGGAAGAAGAGAGTACACTTTCAACTCCGG
ATGTCACGCGACCTTCAGCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAATGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCG
CCTATTTCAAGATAGTAAAAGAAAGGTTAAGTCTCAAAGGAAGAAAGGAAAAAAAAAGACAATGAGGTCAAAACCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAACGAGAAGCACTTGAAACTGTCACATGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAAGACTTATTGTCACTTCCTCAGGAAGCTAAAAGTGTCTTTATTGA
TGCGTTGATGGAGTCTGTTGTTGAAGACGTGGAGGCTTCTGACCTGAAAAAGAGTGAAACATGTACAAGCCTTGTGAAACATGAAGCTAAGAAGCTTCTAAAAGAAGGTT
ATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCCGAGCCGGTTCGCATAACAAGAAGATGGAAGACAAAAGTGGCAGACATAAATCATATAACAGTAGAG
GAGGTTGATGACTCAAGAGAAAAAGAGAGCATTGACCAAAAAACTTTTGTTTTTAGGCGCATCAGGCCACTAGTTGCTCGTGCTTTAGTCTTTCAGAGGTTAATTGTGAA
TGAAACAGAAGAAGAAAGTGCACAACCTACCAATAGCCCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGGAAGAAGAGAGTACACTTTCAACTCCGG
ATGTCACGCGACCTTCAGCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAATAG
Protein sequenceShow/hide protein sequence
MRRSQEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFQDSKRKVKSQRKKGKKKTMRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQREALETVTCHIVDVVEDD
DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVFIDALMESVVEDVEASDLKKSETCTSLVKHEAKKLLKEGYSLPTTRKGLGYKLPEPVRITRRWKTKVADINHITVE
EVDDSREKESIDQKTFVFRRIRPLVARALVFQRLIVNETEEESAQPTNSPTRSSVFRRLSMFIGEEESTLSTPDVTRPSAFRRLNMPVGEE