; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018014 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018014
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold9:29631283..29633912
RNA-Seq ExpressionSpg018014
SyntenySpg018014
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]6.7e-1542.86Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR    + + +    +   DK Q +    R R  Q D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHG
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++   LKEE+E LI   YLKE+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]4.8e-1342.2Show/hide
Query:  KYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGKDGGGPPL
        K TPT++  EQ+LMEI++  LL  P ++K+    R K QY LFHRDHGH+T++   LKEE+E LIR+ YLKE+    +A Q            D   P  
Subjt:  KYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGKDGGGPPL

Query:  EIHVSLDHQ
        EI   ++ Q
Subjt:  EIHVSLDHQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.1e-1747.37Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR E + KR +    +   DK Q +    R R  Q D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHG
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++   LKEE+E LIR  YLKE+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]3.2e-1741.72Show/hide
Query:  MSAEEL------LKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCL
        MSAEE       L+ KR++++ +R       SK +K+ R          Q D  +KFEKYTPT++P EQ+LMEI++  LL  P  +K+  + R K +YCL
Subjt:  MSAEEL------LKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCL

Query:  FHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGK
        FHRDHGH+T +   LKEE+E LIR  YLKE+   ++A      P R++  K
Subjt:  FHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGK

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]3.2e-1746.62Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR E + KR +    +   DK Q +    R R  Q D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH 
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++Y  LKEE+E LIR  YL+E+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128053.3e-1542.86Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR    + + +    +   DK Q +    R R  Q D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHG
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++   LKEE+E LI   YLKE+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

A0A6J1DRG9 uncharacterized protein LOC1110235872.3e-1350Show/hide
Query:  YTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHGHSTRNYIQLKEEIEALIRNRYLKE--FTTKVEADQRWSRPTRD
        YT T+IP EQ+LMEI++  LL  P ++K+    R K +YCLFHRDH H+T++   LKEE+E LIR  YLKE     K +AD R +R  R+
Subjt:  YTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHGHSTRNYIQLKEEIEALIRNRYLKE--FTTKVEADQRWSRPTRD

A0A6J1DWY0 uncharacterized protein LOC1110252935.4e-1847.37Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR E + KR +    +   DK Q +    R R  Q D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHG
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++   LKEE+E LIR  YLKE+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-1746.62Show/hide
Query:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG
        MSA E   SKR E + KR +    +   DK Q +    R R  Q D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH 
Subjt:  MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHG

Query:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ
        H+T++Y  LKEE+E LIR  YL+E+  + +A Q
Subjt:  HSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256121.6e-1741.72Show/hide
Query:  MSAEEL------LKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCL
        MSAEE       L+ KR++++ +R       SK +K+ R          Q D  +KFEKYTPT++P EQ+LMEI++  LL  P  +K+  + R K +YCL
Subjt:  MSAEEL------LKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCL

Query:  FHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGK
        FHRDHGH+T +   LKEE+E LIR  YLKE+   ++A      P R++  K
Subjt:  FHRDHGHSTRNYIQLKEEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCAGAAGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGCACAAAAGACATTCTTCATCTGACTACGACAGTAAAAAGGACAAGAAGCAGCGAACAGATGAAAG
AGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAAGAGCAGATCTTGATGGAGATACGGAATACAAACCTGC
TCAACGCGCCCAGGAAGTTGAAGTCAAATCTTGACAATAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGACCATGGCCATTCAACCAGGAACTACATTCAGCTAAAA
GAGGAAATTGAAGCGTTGATTCGGAACAGATATTTGAAGGAGTTCACCACAAAGGTTGAGGCTGACCAGAGATGGTCGAGGCCGACCAGAGATGACACAGGCAAAGATGG
TGGTGGACCTCCTCTGGAAATCCATGTGAGCCTGGACCACCAAGTCTACCTCACCTCATATGGGTTGAGCACATACACTTCATCTGAGTCAAGCTCACCGGACTGGGGCC
GAAACCGAGCACCTCTTGCCAGGGCCGAGCACCTCTTACCGAGGCCGAGCACAAACTTTAAAGGAGCTCAACCTATAGCAATAAGTCACCCTGAATCCCAATTCAAGAGT
GGGGGCTTAAATATGATCACTTTGGATCCCAGAGGAGAAACCGGCAAGTGGGATGGGCCAAGACCGAAGGGGTCGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCT
AAGGCCGAGGCCGAGGCTCATGGTCGGCCTGCTCGTGCGGGTCGAGCCTGTCCGGCTCCGTTTGGTCCCTACCGCCTTTGGCTGTCCCGGTTCCGCCTGGTTTGTCCCGA
AATGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAACAAGTATTTATACCCCTCTTTGCCACTGAAGAAGGGGACCCGAACTCTTGACTCTCTCCTCTTACTCTCTTGC
TCTCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACTGGTGTGCAGGTTTACACTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTT
ACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCAGAAGAGTTACTGAAATCAAAGAGGTCAGAACGAGAGCACAAAAGACATTCTTCATCTGACTACGACAGTAAAAAGGACAAGAAGCAGCGAACAGATGAAAG
AGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAAGAGCAGATCTTGATGGAGATACGGAATACAAACCTGC
TCAACGCGCCCAGGAAGTTGAAGTCAAATCTTGACAATAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGACCATGGCCATTCAACCAGGAACTACATTCAGCTAAAA
GAGGAAATTGAAGCGTTGATTCGGAACAGATATTTGAAGGAGTTCACCACAAAGGTTGAGGCTGACCAGAGATGGTCGAGGCCGACCAGAGATGACACAGGCAAAGATGG
TGGTGGACCTCCTCTGGAAATCCATGTGAGCCTGGACCACCAAGTCTACCTCACCTCATATGGGTTGAGCACATACACTTCATCTGAGTCAAGCTCACCGGACTGGGGCC
GAAACCGAGCACCTCTTGCCAGGGCCGAGCACCTCTTACCGAGGCCGAGCACAAACTTTAAAGGAGCTCAACCTATAGCAATAAGTCACCCTGAATCCCAATTCAAGAGT
GGGGGCTTAAATATGATCACTTTGGATCCCAGAGGAGAAACCGGCAAGTGGGATGGGCCAAGACCGAAGGGGTCGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCT
AAGGCCGAGGCCGAGGCTCATGGTCGGCCTGCTCGTGCGGGTCGAGCCTGTCCGGCTCCGTTTGGTCCCTACCGCCTTTGGCTGTCCCGGTTCCGCCTGGTTTGTCCCGA
AATGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAACAAGTATTTATACCCCTCTTTGCCACTGAAGAAGGGGACCCGAACTCTTGACTCTCTCCTCTTACTCTCTTGC
TCTCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACTGGTGTGCAGGTTTACACTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTT
ACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGA
Protein sequenceShow/hide protein sequence
MSAEELLKSKRSEREHKRHSSSDYDSKKDKKQRTDERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNLDNRDKSQYCLFHRDHGHSTRNYIQLK
EEIEALIRNRYLKEFTTKVEADQRWSRPTRDDTGKDGGGPPLEIHVSLDHQVYLTSYGLSTYTSSESSSPDWGRNRAPLARAEHLLPRPSTNFKGAQPIAISHPESQFKS
GGLNMITLDPRGETGKWDGPRPKGSGFWPDPLLGLGLRPRPRLMVGLLVRVEPVRLRLVPTAFGCPGSAWFVPKCLRIPKNPRSMNKYLYPSLPLKKGTRTLDSLLLLSC
SPLPFSDLSIGGGVASTTLVCRFTLLQATSSPSSTNLPLVAREGQVSFL