; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018027 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018027
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold9:27539454..27549651
RNA-Seq ExpressionSpg018027
SyntenySpg018027
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-1938.85Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A  A  SR + KRR   G++ +      + T + I KIA W   K E++ S  K LY +LQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP
        D L+VA +LL D  M+  F+D+  EWK+  CM IL R P
Subjt:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1838.85Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A  A   R + KRR   G++ +      + T + I KIA W   K E++ S  K LY ELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP
        D L+VA +LL D  M+  F+D+  EWK+  CM IL R P
Subjt:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-1235.25Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A     S+ + KRR    ++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+V  +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]9.6e-1437.7Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP      A  SR + KRR   G++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+VA +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]5.3e-1235.25Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A     S+ + KRR    ++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+V  +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992482.5e-1235.25Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A     S+ + KRR    ++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+V  +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

A0A5A7U7F7 Retrotransposon protein2.8e-1938.85Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A  A  SR + KRR   G++ +      + T + I KIA W   K E++ S  K LY +LQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP
        D L+VA +LL D  M+  F+D+  EWK+  CM IL R P
Subjt:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP

A0A5A7VG45 Retrotransposon protein1.1e-1838.85Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A  A   R + KRR   G++ +      + T + I KIA W   K E++ S  K LY ELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP
        D L+VA +LL D  M+  F+D+  EWK+  CM IL R P
Subjt:  DGLVVARALLSDENMMTHFMDFLPEWKFDYCMEILDRAP

A0A5A7VGQ0 Retrotransposon protein2.5e-1235.25Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP   A     S+ + KRR    ++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+V  +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

A0A5D3C7T4 Uncharacterized protein4.6e-1437.7Show/hide
Query:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME
        M+++ ED  +P+P  + P  GE++  TP      A  SR + KRR   G++ +      + T + I KIA W   K E++ S  K LYAELQ+IPG+ ++
Subjt:  MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSME

Query:  DGLVVARALLSDENMMTHFMDF
        D L+VA +LL D  M+  F+D+
Subjt:  DGLVVARALLSDENMMTHFMDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGTGGACTACGAGGATTGCTACGTCCCCAGTCCCCCAATTATTTATCCCACACTTGGAGAGGAATTGTGTGGGACACCGGCTGGTAAGGCAGGTGGTGCAAGACC
TTCCAGGGCAGCACATAAGAGACGTCTGTCCATTGGGAACGTGGCAGAGGTACTGGAGAATGGATTCCAACTGACTGTACAACATATCGAAAAGATTGCGCTCTGGCCGA
CCAGGAAGGATGAGCTGAAGAGGAGTCGTCGAAAGGAGTTGTACGCGGAGCTACAATCCATACCTGGAGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCCCTACTT
TCTGATGAGAACATGATGACTCACTTTATGGACTTCCTTCCAGAATGGAAGTTCGACTACTGTATGGAAATCCTCGACAGGGCACCGAGACAGATATTCTCGATAGATTC
CCTCGTGTTCGAACAGCCATTAGCAGGTTCTGTTATTCATGAGGCATTGCATCCTTTCGACTACAGATGCTTCCCAAATCCACCGGAATCCTCTGGCTCGACGCCGACCA
CGATGCCACCGCTTCTTAGACTAGAACCACCAACGACCACGACCACGAAGTTGCCATTAATGCCTCCATTTCCTCCTTCAAATCCATGCTCAAATCCGACTGGTACATCA
ACTCTACCACTCCTTCTCAATCCCTCTCACTATGATTTTCATTGTCCAGATGCCCTCGCCTCCATGTTCTTGAGATCTTGGTTAACCATGGCTGAATTCTTGAGATGCGA
TCGAATGGGATGGTGTGATTTGAGAAATGGATGGGCGTTCGGAGGCGATCCAGGGCTGAACCGAGTGGAACCGAGATGGCCATGGGTAGCAAGGACCGAAAGGAGGCGAA
AGGACTCGGCCCACGCAAGTGGGCCGAGTGGTCAGCCTCGGCATCGGGCCGAGGCCGACCATATGGATCGGGCCAAGGCCTGGTCCCTCCGACCTTTTGGCCCTTTTTGC
CTCCGGAGTCCATTTTCCGATCCTATTTCTGGGCTCATGTCAGGTTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATTACCTATAACATATACTATGTACCA
TATTCTCATACGATGTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGTGGACTACGAGGATTGCTACGTCCCCAGTCCCCCAATTATTTATCCCACACTTGGAGAGGAATTGTGTGGGACACCGGCTGGTAAGGCAGGTGGTGCAAGACC
TTCCAGGGCAGCACATAAGAGACGTCTGTCCATTGGGAACGTGGCAGAGGTACTGGAGAATGGATTCCAACTGACTGTACAACATATCGAAAAGATTGCGCTCTGGCCGA
CCAGGAAGGATGAGCTGAAGAGGAGTCGTCGAAAGGAGTTGTACGCGGAGCTACAATCCATACCTGGAGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCCCTACTT
TCTGATGAGAACATGATGACTCACTTTATGGACTTCCTTCCAGAATGGAAGTTCGACTACTGTATGGAAATCCTCGACAGGGCACCGAGACAGATATTCTCGATAGATTC
CCTCGTGTTCGAACAGCCATTAGCAGGTTCTGTTATTCATGAGGCATTGCATCCTTTCGACTACAGATGCTTCCCAAATCCACCGGAATCCTCTGGCTCGACGCCGACCA
CGATGCCACCGCTTCTTAGACTAGAACCACCAACGACCACGACCACGAAGTTGCCATTAATGCCTCCATTTCCTCCTTCAAATCCATGCTCAAATCCGACTGGTACATCA
ACTCTACCACTCCTTCTCAATCCCTCTCACTATGATTTTCATTGTCCAGATGCCCTCGCCTCCATGTTCTTGAGATCTTGGTTAACCATGGCTGAATTCTTGAGATGCGA
TCGAATGGGATGGTGTGATTTGAGAAATGGATGGGCGTTCGGAGGCGATCCAGGGCTGAACCGAGTGGAACCGAGATGGCCATGGGTAGCAAGGACCGAAAGGAGGCGAA
AGGACTCGGCCCACGCAAGTGGGCCGAGTGGTCAGCCTCGGCATCGGGCCGAGGCCGACCATATGGATCGGGCCAAGGCCTGGTCCCTCCGACCTTTTGGCCCTTTTTGC
CTCCGGAGTCCATTTTCCGATCCTATTTCTGGGCTCATGTCAGGTTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATTACCTATAACATATACTATGTACCA
TATTCTCATACGATGTCGCTAG
Protein sequenceShow/hide protein sequence
MNVDYEDCYVPSPPIIYPTLGEELCGTPAGKAGGARPSRAAHKRRLSIGNVAEVLENGFQLTVQHIEKIALWPTRKDELKRSRRKELYAELQSIPGVSMEDGLVVARALL
SDENMMTHFMDFLPEWKFDYCMEILDRAPRQIFSIDSLVFEQPLAGSVIHEALHPFDYRCFPNPPESSGSTPTTMPPLLRLEPPTTTTTKLPLMPPFPPSNPCSNPTGTS
TLPLLLNPSHYDFHCPDALASMFLRSWLTMAEFLRCDRMGWCDLRNGWAFGGDPGLNRVEPRWPWVARTERRRKDSAHASGPSGQPRHRAEADHMDRAKAWSLRPFGPFC
LRSPFSDPISGLMSGCPRQLLVHRSGPKLPITYTMYHILIRCR