CuGenDBv2

Gene ID	Spg018030
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	scaffold9:26274115..26276985
RNA-Seq Expression	Spg018030
Synteny	Spg018030
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAN70431.1 hypothetical protein VITISV_030910 [Vitis vinifera]

1.4e-73

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P S+   +EK+ R+F+W+G       +LV+WE  + P +LGG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G +  RN AL+ KW WRF +E+  LW  VI  IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  +S+V+    L D R W + SSG FT KSFF A  K    I       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W+ +  + G+ +   +  ED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    +W +W+ERN R FED+  S ++ W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

CAN75156.1 hypothetical protein VITISV_042643 [Vitis vinifera]

6.5e-74

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P ++GG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ I F ED W  N  L A F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        +LY +S  +                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC R GE +DHLF+HC      W  +  L+G+ +   + IED L+          + +++   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    IW +W+ERN+R FED+  + +  W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

3.2e-73

34.5

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ R+F+W+G       +LV+WE  + P +LGG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G +  RN AL+ KW WRF +E+  LW  VI  IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  +S+V+    L D R W + SSG FT KSFF A  K    I       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W+ +  L G+ +   +  ED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    +W +W+ERN R FED+  S ++ W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]

6.6e-02

30.49

Show/hide

Query:  MEKLKGLKIKIKEWNKESYGKKVRRKIDVIQQIEQIDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGWLTE
        M KLK +K K+KEWN  ++G    RK  ++  + +IDL+E++ N+    + +R   + +L ++ + E+    QK ++ W+ E
Subjt:  MEKLKGLKIKIKEWNKESYGKKVRRKIDVIQQIEQIDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGWLTE

RVW72196.1 Flowering time control protein FY [Vitis vinifera]

2.0e-75

34.26

Show/hide

Query:  LSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIK
        +S + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P +
Subjt:  LSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIK

Query:  LGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQA
        +GGLG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L A
Subjt:  LGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQA

Query:  SFPDLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWK
         F +LY +S  +                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W 
Subjt:  SFPDLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWK

Query:  HKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVV
         K P KVK   W +A+  +NT++KLQ +  +  L P  C LC R GE +DHLF+HC      W  +  L+G+ +   + IED L+          + +++
Subjt:  HKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVV

Query:  ASCAFRATIWSIWKERNDRSFEDQSSSFDSFW
           A    IW +W+ERN+R FED+  + +  W
Subjt:  ASCAFRATIWSIWKERNDRSFEDQSSSFDSFW

RVX04562.1 putative ribonuclease H protein [Vitis vinifera]

1.1e-73

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P ++GG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W  +  L+G+ +   + IED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    IW +W+ERN+R FED+  + +  W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

TrEMBL top hits

e value

%identity

Alignment

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein

1.6e-73

34.5

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ R+F+W+G       +LV+WE  + P +LGG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G +  RN AL+ KW WRF +E+  LW  VI  IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  +S+V+    L D R W + SSG FT KSFF A  K    I       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W+ +  L G+ +   +  ED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    +W +W+ERN R FED+  S ++ W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein

3.2e-02

30.49

Show/hide

Query:  MEKLKGLKIKIKEWNKESYGKKVRRKIDVIQQIEQIDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGWLTE
        M KLK +K K+KEWN  ++G    RK  ++  + +IDL+E++ N+    + +R   + +L ++ + E+    QK ++ W+ E
Subjt:  MEKLKGLKIKIKEWNKESYGKKVRRKIDVIQQIEQIDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGWLTE

A0A438GJ06 Flowering time control protein FY

9.7e-76

34.26

Show/hide

Query:  LSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIK
        +S + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P +
Subjt:  LSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIK

Query:  LGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQA
        +GGLG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L A
Subjt:  LGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQA

Query:  SFPDLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWK
         F +LY +S  +                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W 
Subjt:  SFPDLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWK

Query:  HKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVV
         K P KVK   W +A+  +NT++KLQ +  +  L P  C LC R GE +DHLF+HC      W  +  L+G+ +   + IED L+          + +++
Subjt:  HKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVV

Query:  ASCAFRATIWSIWKERNDRSFEDQSSSFDSFW
           A    IW +W+ERN+R FED+  + +  W
Subjt:  ASCAFRATIWSIWKERNDRSFEDQSSSFDSFW

A0A438J6H5 Putative ribonuclease H protein

5.3e-74

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P ++GG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W  +  L+G+ +   + IED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    IW +W+ERN+R FED+  + +  W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

A5BQI4 Reverse transcriptase domain-containing protein

7.0e-74

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P S+   +EK+ R+F+W+G       +LV+WE  + P +LGG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G +  RN AL+ KW WRF +E+  LW  VI  IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ IRF ED W  N  L + F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        DLY +   K                           EI+    L+  +S+V+    L D R W + SSG FT KSFF A  K    I       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC   GE +DHLF+HC      W+ +  + G+ +   +  ED L+          + + +   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    +W +W+ERN R FED+  S ++ W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

A5BZG3 Reverse transcriptase domain-containing protein

3.1e-74

34.03

Show/hide

Query:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG
        + LGG  +     +P++ER+  +L+ W+K  +S GGR+TL Q+  + IP Y  SL K P SI   +EK+ RDF+W+G       +L++WE  + P ++GG
Subjt:  ISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGG

Query:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP
        LG G    RN AL+ KW WRF +E+  LW  VIA IYG  P GW +  + +     PW AIA+ ++ F  F +  +  G+ I F ED W  N  L A F 
Subjt:  LGVGALYQRNDALITKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFP

Query:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS
        +LY +S  +                           EI+    L+  + +V L     D R W + SSG+F+ KSFF A  K    +       +W  K 
Subjt:  DLYAISGKK---------------------------EIESWMALVEKISNVQLGSGLDDIR-WQIDSSGAFTTKSFFQATVKTPVKIKPTLINLIWKHKS

Query:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC
        P KVK   W +A+  +NT++KLQ +  +  L P  C LC R GE +DHLF+HC      W  +  L+G+ +   + IED L+          + +++   
Subjt:  PKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASC

Query:  AFRATIWSIWKERNDRSFEDQSSSFDSFW
        A    IW +W+ERN+R FED+  + +  W
Subjt:  AFRATIWSIWKERNDRSFEDQSSSFDSFW

SwissProt top hits

e value

%identity

Alignment

P08548 LINE-1 reverse transcriptase homolog

6.0e-06

26.9

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Query:  IDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGW--LTEALSYKLSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVT----
        +++++E  N+  + I   N  K+     T N Q     K  I +  + + + Y   +++   K   K   E L + +   +  W+ IP S  GR+     
Subjt:  IDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGW--LTEALSYKLSWISLGGKYRRKALCEPLIERLRVKLENWRKIPISKGGRVT----

Query:  --LTQAI--FNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSV
          L +AI  FN+IP      +KAP S  K +EKI   FIWN    +    L+  +  A  I L  L    LY ++  + T W+W  ++E D +W  +
Subjt:  --LTQAI--FNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALITKWFWRFSQEKDSLWRSV

P0C2F6 Putative ribonuclease H protein At1g65750

1.8e-34

26.16

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Query:  LIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALIT
        ++ER+  ++  WR+  +S  GR+TLT+A+ +S+P +  S +  P+SI   ++++SR F+W     K   +LVKW     P K GGLGV A    N ALI+
Subjt:  LIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALIT

Query:  KWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYK-AFEQFTKFHLRCGKNIRFREDRWCDNVPL----QASFP----------
        K  WR  QEK+SLW  V+   Y V         + K   +S W +IA   +        +    G+ IRF  DRW    PL        P          
Subjt:  KWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYK-AFEQFTKFHLRCGKNIRFREDRWCDNVPL----QASFP----------

Query:  --------DLYAISGKKEIESWMALVEKISNVQLGSGLDDIRWQIDSSGAFTTKSFFQATV--KTPVKIKPTLINLIWKHKSPKKVKVFLWSLAYRSINT
                D   I       + + L   + ++  G+  D + W+    G F+ +S ++     + P     +  N +WK + P++VK FLW +  +++ T
Subjt:  --------DLYAISGKKEIESWMALVEKISNVQLGSGLDDIRWQIDSSGAFTTKSFFQATV--KTPVKIKPTLINLIWKHKSPKKVKVFLWSLAYRSINT

Query:  DEKLQKKFQHGYLSPSG-CRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDRS
        +E+  ++    +LS S  C++C    E + H+   C      W  +           + + +WL + L   +      +  S  F   IW  WK R    
Subjt:  DEKLQKKFQHGYLSPSG-CRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDRS

Query:  FEDQSSSFD
        F + +   D
Subjt:  FEDQSSSFD

Arabidopsis top hits

e value

%identity

Alignment

AT1G45063.1 copper ion binding;electron carriers

7.5e-04

27.37

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Query:  GYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGIS-FCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDRSFEDQS
        G   PS C LC    E   H+F  C F+ + WSF      ++   + +    WL           K   +   A++A+++ IW+ERN R   ++S
Subjt:  GYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGIS-FCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDRSFEDQS

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

5.4e-18

21.86

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Query:  PLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALI
        PL+E++RV++  W    +S  GR+ L  ++ +S+  +  S  + P +  K ++ I   F+W+G         V W     P   GGLG+ +L + N    
Subjt:  PLIERLRVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALI

Query:  TKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCD----------------NVPLQAS
                  K S W                SG  T   G+  W  I K+      F K  +  G N  F  D W                   + L AS
Subjt:  TKWFWRFSQEKDSLWRSVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCD----------------NVPLQAS

Query:  FPDLYA--ISGKKEIESWMALVEKISNVQ---LGSGLDDIRWQIDS---SGAFTTKSFFQATVKTPVKIKPTLINLIWKHKSPKKVKVFLWSLAYRSINT
          +        +   ++ + + + I+ V+   L SG D +RW+ +       F TK  + AT + P K+K      +W   +  K  V  W      + T
Subjt:  FPDLYA--ISGKKEIESWMALVEKISNVQ---LGSGLDDIRWQIDS---SGAFTTKSFFQATVKTPVKIKPTLINLIWKHKSPKKVKVFLWSLAYRSINT

Query:  DEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDR
         +++         + S C LC    E  DHLF  C ++                                    +   +    F+ T+ S+WKERN R
Subjt:  DEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDR

AT3G25270.1 Ribonuclease H-like superfamily protein

3.3e-07

27.07

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Query:  IWKHKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKA
        IWK K+  K+K FLW L   ++ T + L+++    +     C  C +E E   HLF  C +A + W   +G+            +  +E L +  L N+ 
Subjt:  IWKHKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIEDWLLEGLNAWNLKNKA

Query:  RVVASCAFRATIWSIWKERNDRSFEDQSSSFDS
          + + A    +W +WK RN   F+ +S S+ +
Subjt:  RVVASCAFRATIWSIWKERNDRSFEDQSSSFDS

Sequences

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CDS sequence

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ATGGAAAAATTAAAAGGGCTAAAGATAAAGATCAAGGAGTGGAACAAAGAATCTTATGGCAAGAAAGTTAGAAGAAAAATTGATGTTATTCAGCAAATAGAGCAAATAGA
CCTGCTGGAAGAGCAAGATAACATTCTCCCTCATCATATTTCTGATAGAAATAGACTTAAAGCTAAGCTTCTGGAAATCACCATTAATGAGCAGAGAAGCCTAAACCAAA
AATGCAAGATTGGATGGTTAACAGAAGCCCTTTCCTATAAATTATCTTGGATTTCCCTTGGGGGAAAGTACCGTCGGAAAGCCCTATGCGAACCATTGATAGAACGACTC
AGAGTCAAGCTTGAAAATTGGCGAAAGATTCCTATATCCAAGGGTGGGAGAGTGACATTAACTCAAGCTATTTTCAATAGTATACCTCAGTACCTCTTCTCCCTCTTAAA
AGCTCCTAAATCTATTACCAAAGCCATGGAAAAAATCAGCAGAGACTTTATATGGAATGGTGGGACTTATAAGCCAGGTAGCAATCTTGTTAAATGGGAATGGACTGCTC
TCCCCATCAAGCTCGGTGGTTTAGGGGTGGGAGCCTTATATCAGAGAAATGATGCCCTAATCACTAAATGGTTTTGGAGATTTTCCCAGGAGAAAGATTCCTTGTGGAGA
TCAGTGATAGCTGGTATTTATGGAGTTGACCCCTTCGGCTGGAAATCTGGTGAGCTAACTAAAAGGAGAGGCAACAGTCCTTGGACAGCCATTGCTAAAAACTATAAGGC
TTTTGAGCAGTTTACCAAATTTCATCTTAGATGCGGTAAAAATATCAGATTTCGGGAAGATAGATGGTGCGACAATGTGCCTCTGCAGGCCTCCTTTCCGGATCTTTATG
CCATCTCCGGGAAAAAAGAAATAGAAAGCTGGATGGCGTTGGTGGAGAAAATCAGTAATGTCCAGTTGGGCTCGGGCCTAGATGATATCCGGTGGCAGATTGATAGCAGT
GGGGCGTTTACAACTAAATCCTTCTTCCAGGCTACTGTTAAAACCCCTGTCAAGATCAAGCCAACTCTAATCAACCTTATTTGGAAGCATAAAAGCCCCAAAAAAGTTAA
AGTTTTTTTGTGGTCCTTGGCATACCGCAGCATTAACACTGATGAGAAGCTTCAAAAGAAATTTCAACACGGGTATCTCTCCCCCTCGGGTTGTCGTTTGTGCTTGAGGG
AAGGGGAACATCTTGACCACCTTTTTATCCACTGTAGCTTTGCTTGGAAGGCTTGGAGTTTTATTGCTGGGTTGCTGGGCATTTCTTTTTGTGTCCTTCAAAAGATTGAA
GATTGGTTGTTGGAGGGGCTGAACGCTTGGAACTTAAAAAACAAAGCTAGAGTGGTGGCCAGTTGTGCGTTTAGAGCGACCATTTGGAGCATTTGGAAGGAAAGGAATGA
TAGATCGTTTGAAGATCAATCGTCTAGTTTCGACTCTTTTTGGGCTTCCTCATCCCCTGGCCCTTAG

mRNA sequence

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Protein sequence

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MEKLKGLKIKIKEWNKESYGKKVRRKIDVIQQIEQIDLLEEQDNILPHHISDRNRLKAKLLEITINEQRSLNQKCKIGWLTEALSYKLSWISLGGKYRRKALCEPLIERL
RVKLENWRKIPISKGGRVTLTQAIFNSIPQYLFSLLKAPKSITKAMEKISRDFIWNGGTYKPGSNLVKWEWTALPIKLGGLGVGALYQRNDALITKWFWRFSQEKDSLWR
SVIAGIYGVDPFGWKSGELTKRRGNSPWTAIAKNYKAFEQFTKFHLRCGKNIRFREDRWCDNVPLQASFPDLYAISGKKEIESWMALVEKISNVQLGSGLDDIRWQIDSS
GAFTTKSFFQATVKTPVKIKPTLINLIWKHKSPKKVKVFLWSLAYRSINTDEKLQKKFQHGYLSPSGCRLCLREGEHLDHLFIHCSFAWKAWSFIAGLLGISFCVLQKIE
DWLLEGLNAWNLKNKARVVASCAFRATIWSIWKERNDRSFEDQSSSFDSFWASSSPGP

Spg018030 (gene) of Sponge gourd (cylindrica) v1 genome