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Spg018096 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018096
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:31502049..31506110
RNA-Seq ExpressionSpg018096
SyntenySpg018096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]5.7e-1331.45Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW+S+ W  +L+ +G+R+RVG G                             +V D    SG W +  LK     +++D I +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+  LAG   D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]3.7e-1230.38Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW S+ W  +L+ +G+R+RVG G                             +V D    SG W +  LK     +++D I +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+L      D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.7e-1244.9Show/hide
Query:  FVKQRLLPTTHDSTVSRERVLLAFAILRSFSIDVGKIMASEISGCWKKKVGKLFFPNMITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQEAR
        F+K RLLPTTH  TVS++R+LL +++L   SI+VG+++ SEI  C  +K G LFFP++IT LC+    P    +  L   G ID   +AR+  TQE +
Subjt:  FVKQRLLPTTHDSTVSRERVLLAFAILRSFSIDVGKIMASEISGCWKKKVGKLFFPNMITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQEAR

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.4e-1431.06Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-----------------------------VSDFMDMSGNWRLEKLKQCILQEDIDIIRRI--PTNLS
        A++G  PSFIW+SI+W   +IK+G+R+R+GDG+                             V+D +D    WR+++L+Q  ++EDI+ I +I  P+   
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-----------------------------VSDFMDMSGNWRLEKLKQCILQEDIDIIRRI--PTNLS

Query:  IRDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQP--RTTRIWQNSWILAL
          D ++WH+D+ G Y+ KSGY+L L           +  P E +    ++R+W+  W+L L
Subjt:  IRDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQP--RTTRIWQNSWILAL

XP_015388578.1 uncharacterized protein LOC107178209 [Citrus sinensis]4.4e-1336.07Show/hide
Query:  VTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-----------------------------VSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNL
        + A+IG  PSFIW+SI+W   +I +G R+R+G G+                             V D +     W+++ ++Q  +QED DII+RIP    
Subjt:  VTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-----------------------------VSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNL

Query:  SIRDSIIWHYDRLGSYTAKSGY
        S RD + WHYD+LG Y+ KSGY
Subjt:  SIRDSIIWHYDRLGSYTAKSGY

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein2.8e-1331.45Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW+S+ W  +L+ +G+R+RVG G                             +V D    SG W +  LK     +++D I +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+  LAG   D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

A0A2P5CEY2 Uncharacterized protein1.8e-1244.9Show/hide
Query:  FVKQRLLPTTHDSTVSRERVLLAFAILRSFSIDVGKIMASEISGCWKKKVGKLFFPNMITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQEAR
        F+K RLLPTTH  TVS++R+LL +++L   SI+VG+++ SEI  C  +K G LFFP++IT LC+    P    +  L   G ID   +AR+  TQE +
Subjt:  FVKQRLLPTTHDSTVSRERVLLAFAILRSFSIDVGKIMASEISGCWKKKVGKLFFPNMITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQEAR

A0A5E4FZN9 PREDICTED: retrotransposon5.2e-1229.75Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW+S+ W  +L+ +G+R+RVG+G                              V D    SG W +  LK     +++D   +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+L      D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)2.8e-1331.45Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW+S+ W  +L+ +G+R+RVG G                             +V D    SG W +  LK     +++D I +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+  LAG   D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGY-SDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

M5WJW2 Reverse transcriptase domain-containing protein1.8e-1230.38Show/hide
Query:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI
        AE+G  PSFIW S+ W  +L+ +G+R+RVG G                             +V D    SG W +  LK     +++D I +IP  +L+ 
Subjt:  AEIGRKPSFIWKSIMWECDLIKQGMRFRVGDG-----------------------------QVSDFMDMSGNWRLEKLKQCILQEDIDIIRRIP-TNLSI

Query:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL
         D +IWHY+R G Y+ KSGY+L      D++S      P  +    ++ W+  W L +
Subjt:  RDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0727.1Show/hide
Query:  LVTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ----------------------------VSDFMDMSGN---WRLEKLKQCILQEDIDIIRRIPT
        ++ A++ ++ S+ W S++    L+K+G R  +GDGQ                            +++  +  G+   W   K+ Q + Q D   I RI  
Subjt:  LVTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ----------------------------VSDFMDMSGN---WRLEKLKQCILQEDIDIIRRIPT

Query:  NLSIR-DSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIW
          S + D IIW+Y+  G YT +SGY LL    S  +  I    P       TRIW
Subjt:  NLSIR-DSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIW

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-0827.71Show/hide
Query:  VTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-------------------------------------VSDFMDMSG-NWRLEKLKQCILQEDIDI
        + A +G +PSF+WKSI    ++++QG R  VG+G+                                     VSD +D SG  WR + ++    + +  +
Subjt:  VTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQ-------------------------------------VSDFMDMSG-NWRLEKLKQCILQEDIDI

Query:  IRRI-PTNLSIRDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVE-QQPRTTRIWQNSW
        I  + P    I DS  W Y   G YT KSGY +L    + R S      P E  +P    I+Q  W
Subjt:  IRRI-PTNLSIRDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVE-QQPRTTRIWQNSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGTCAAACAGAGATTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTGGCTTTCGCGATTTTGAGGTCTTTCAGCATTGATGTAGG
GAAGATTATGGCTAGTGAAATTTCTGGATGTTGGAAGAAGAAAGTGGGGAAACTGTTTTTTCCGAATATGATTACGATGCTTTGCAAGCGTGTCGGGGTTCCAGAGAATG
AAGGTGATGTTATTTTATTTGACAAGGGAATTATCGATACACCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACG
ATTTTAGAACGACTTGCACTGTCGGCCAGCAGGCAAGACTTGGACTGGTTACGCTTAATTAGATCAAGCCTAGTTAGTGATGAGTTTGAGGCAAGGGTATACTGCACCAT
AAAGTGGGTCATCCCATGCTTAAGAGCTTATGACTGTAGGGCTGCTTTAAGTCTGAAAAACATAAATATAAACCTCTTAAAAATGCGTTTTAATATGTCTGATAATAGAG
CTAGGCTGTGGCAAGTTCTTAGAATTGAGTCAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATAT
GTTGCTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAAACTGCCACGTCACACTGAATAGAGGAGAGAGATTGGAGACCTACAAGAAGACCAT
CAATTGCAAGCTGATCAAGAGGATTAATATTTTCTTGTATTATCTTGTAGTTATGGATATGCTTACTCAGCTTGTAACTGCTGAGATTGGGAGAAAACCTTCGTTTATTT
GGAAAAGCATCATGTGGGAATGTGATCTTATCAAGCAGGGAATGAGGTTCAGGGTAGGGGATGGTCAAGTATCTGATTTCATGGATATGTCAGGGAACTGGAGACTAGAA
AAGCTTAAGCAGTGTATTTTGCAGGAGGACATTGATATTATTAGGAGAATTCCAACAAATTTAAGCATTAGAGACAGTATAATCTGGCACTATGATCGCTTAGGCTCTTA
CACTGCCAAAAGCGGATACAAATTGTTGCTAGCAGGCTACAGCGATCGTCTCAGCAGGATACAACGACTAATTCCGGTAGAACAGCAACCTCGAACTACTCGGATCTGGC
AGAACTCTTGGATACTTGCTCTCAACTCGACTCAAGATCAAAAGAAACAAAGAAAGAAGGAAGAATGCTCCAAATGGAATGGGATGATTCAAATGAAGAAACAAGTTGTT
ATTTATAGGCTAACAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGTCAAACAGAGATTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTGGCTTTCGCGATTTTGAGGTCTTTCAGCATTGATGTAGG
GAAGATTATGGCTAGTGAAATTTCTGGATGTTGGAAGAAGAAAGTGGGGAAACTGTTTTTTCCGAATATGATTACGATGCTTTGCAAGCGTGTCGGGGTTCCAGAGAATG
AAGGTGATGTTATTTTATTTGACAAGGGAATTATCGATACACCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACG
ATTTTAGAACGACTTGCACTGTCGGCCAGCAGGCAAGACTTGGACTGGTTACGCTTAATTAGATCAAGCCTAGTTAGTGATGAGTTTGAGGCAAGGGTATACTGCACCAT
AAAGTGGGTCATCCCATGCTTAAGAGCTTATGACTGTAGGGCTGCTTTAAGTCTGAAAAACATAAATATAAACCTCTTAAAAATGCGTTTTAATATGTCTGATAATAGAG
CTAGGCTGTGGCAAGTTCTTAGAATTGAGTCAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATAT
GTTGCTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAAACTGCCACGTCACACTGAATAGAGGAGAGAGATTGGAGACCTACAAGAAGACCAT
CAATTGCAAGCTGATCAAGAGGATTAATATTTTCTTGTATTATCTTGTAGTTATGGATATGCTTACTCAGCTTGTAACTGCTGAGATTGGGAGAAAACCTTCGTTTATTT
GGAAAAGCATCATGTGGGAATGTGATCTTATCAAGCAGGGAATGAGGTTCAGGGTAGGGGATGGTCAAGTATCTGATTTCATGGATATGTCAGGGAACTGGAGACTAGAA
AAGCTTAAGCAGTGTATTTTGCAGGAGGACATTGATATTATTAGGAGAATTCCAACAAATTTAAGCATTAGAGACAGTATAATCTGGCACTATGATCGCTTAGGCTCTTA
CACTGCCAAAAGCGGATACAAATTGTTGCTAGCAGGCTACAGCGATCGTCTCAGCAGGATACAACGACTAATTCCGGTAGAACAGCAACCTCGAACTACTCGGATCTGGC
AGAACTCTTGGATACTTGCTCTCAACTCGACTCAAGATCAAAAGAAACAAAGAAAGAAGGAAGAATGCTCCAAATGGAATGGGATGATTCAAATGAAGAAACAAGTTGTT
ATTTATAGGCTAACAACTTAG
Protein sequenceShow/hide protein sequence
MGFVKQRLLPTTHDSTVSRERVLLAFAILRSFSIDVGKIMASEISGCWKKKVGKLFFPNMITMLCKRVGVPENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINT
ILERLALSASRQDLDWLRLIRSSLVSDEFEARVYCTIKWVIPCLRAYDCRAALSLKNININLLKMRFNMSDNRARLWQVLRIESKVVIICPCRKNYFAAAELGFAECSEY
VAGRLEGANSVLQQSWEQNCHVTLNRGERLETYKKTINCKLIKRINIFLYYLVVMDMLTQLVTAEIGRKPSFIWKSIMWECDLIKQGMRFRVGDGQVSDFMDMSGNWRLE
KLKQCILQEDIDIIRRIPTNLSIRDSIIWHYDRLGSYTAKSGYKLLLAGYSDRLSRIQRLIPVEQQPRTTRIWQNSWILALNSTQDQKKQRKKEECSKWNGMIQMKKQVV
IYRLTT