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Spg018111 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018111
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTracheary element differentiation-related 6
Genome locationscaffold9:31592788..31593255
RNA-Seq ExpressionSpg018111
SyntenySpg018111
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR044950 - Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646200.1 hypothetical protein Csa_016148 [Cucumis sativus]4.4e-4577.6Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV
        MA  N S L RIPPPPPFKPSP  P PSPD HTAIIVIVFISLGSCLFF   V AA+CCFIKKRKK S PQE+   IH+DGHRKVHEDVA   HG+QAVV
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV

Query:  VTIEDDVHIDEIVKKKEHRHGCGLH
        VTIEDD+HIDEIVKKKEH HG GLH
Subjt:  VTIEDDVHIDEIVKKKEHRHGCGLH

KAG6607661.1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4772.61Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA
        MAA N S L RI P       PPPPSPSP+ HTA+IVIVFISLGSCL FFT V AA  CCFIKKR K   P+ E+A VIHVDGHRKVHEDVA  AHG QA
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA

Query:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS
        V+VTIEDDVHIDEI KKKEHRHG GLHGKHEG NSST++V  SS ST DSN++HHQS
Subjt:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS

TYK04341.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]5.3e-5175.5Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV
        MA  N S L RIPPPPPFKPSP PP PSPD HTAIIVIVFISLGSCLFF   V   +CCFIKKRKK S PQE+   I +DGHRKVHEDVA   HG+QA+V
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV

Query:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS
        VTIEDDVHIDEIVKKKEH HG GLHGK HEGG    NS+TMEVAASS+STS
Subjt:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS

XP_022981645.1 uncharacterized protein LOC111480702 [Cucurbita maxima]1.6e-4772.61Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA
        MAA N S L RIPP       PPPPSPSP+ HTA+IVIVFISLGSCL FFT V AA  CCFIKKR K   P+ E+A VI VDGHRKVHEDVA  AHG QA
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA

Query:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS
        V VTIEDDVHIDEI KKKEHRHG GLHGKHEG NSST++V  SS ST DSN++HHQS
Subjt:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS

XP_023521688.1 uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]1.6e-4771.97Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA
        MAA N S L RI P       PPPPSPSP+ HTA+IVIVFISLGSCL FFT V AA  CCFIKKR K   P+ ++A VIHVDGHRKVHEDVA  AHG QA
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA

Query:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS
        V+VTIEDDVHIDEI KKKEHRHG GLHGKHEG NSST++V  SS ST DSN++HHQS
Subjt:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS

TrEMBL top hitse value%identityAlignment
A0A0A0K4D1 Uncharacterized protein4.0e-5276.82Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV
        MA  N S L RIPPPPPFKPSP  P PSPD HTAIIVIVFISLGSCLFF   V AA+CCFIKKRKK S PQE+   IH+DGHRKVHEDVA   HG+QAVV
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV

Query:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS
        VTIEDD+HIDEIVKKKEH HG GLHGK HEGG    NS+TMEVAASS+STS
Subjt:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS

A0A5D3BXC9 Proline-rich receptor-like protein kinase PERK22.6e-5175.5Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV
        MA  N S L RIPPPPPFKPSP PP PSPD HTAIIVIVFISLGSCLFF   V   +CCFIKKRKK S PQE+   I +DGHRKVHEDVA   HG+QA+V
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVV

Query:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS
        VTIEDDVHIDEIVKKKEH HG GLHGK HEGG    NS+TMEVAASS+STS
Subjt:  VTIEDDVHIDEIVKKKEHRHGCGLHGK-HEGG----NSSTMEVAASSNSTS

A0A6J1DM43 uncharacterized protein LOC1110217153.0e-3169.75Show/hide
Query:  DNHTAIIVIVFISLGSCLFFFTLVVAAICCFI--KKRKKTSSPQEIAGVIHVDGHRKVHEDVA--HGAHGEQAVVVTIEDDVHIDEIVKKKEHRHGCG-L
        + H A+IVIVFISLG+C FFF LV AAICCFI  KK+KK+   QE+A VIHVDGHRK+HE  A   G HG QAVVVTIED+V IDE++KKKEH  G G L
Subjt:  DNHTAIIVIVFISLGSCLFFFTLVVAAICCFI--KKRKKTSSPQEIAGVIHVDGHRKVHEDVA--HGAHGEQAVVVTIEDDVHIDEIVKKKEHRHGCG-L

Query:  HGKHE-GGNSSTMEVAASS
        HGKHE GGNSS+MEVA SS
Subjt:  HGKHE-GGNSSTMEVAASS

A0A6J1EEE4 uncharacterized protein LOC1114334584.7e-4569.43Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA
        MAA N S L RI PP           PSP+ HTA+IVIVFISLGSCL FFT V AA  CCFIKKR K   P+ E+A VIHVDGHRKVHEDVA  AHG QA
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA

Query:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS
        V+VTIEDDVH+DEI KKKEHRHG GLHGKHEG NSST++V  SS ST DSN++HHQS
Subjt:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS

A0A6J1J036 uncharacterized protein LOC1114807027.8e-4872.61Show/hide
Query:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA
        MAA N S L RIPP       PPPPSPSP+ HTA+IVIVFISLGSCL FFT V AA  CCFIKKR K   P+ E+A VI VDGHRKVHEDVA  AHG QA
Subjt:  MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAA-ICCFIKKRKKTSSPQ-EIAGVIHVDGHRKVHEDVAHGAHGEQA

Query:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS
        V VTIEDDVHIDEI KKKEHRHG GLHGKHEG NSST++V  SS ST DSN++HHQS
Subjt:  VVVTIEDDVHIDEIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS

SwissProt top hitse value%identityAlignment
C1PGW0 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 63.4e-0839.08Show/hide
Query:  AIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHI---DEIVKKKE
        A I IVF+S G C+F   +    +CC IKK  K S   E   ++HVD H +VHE++  G +G + V +T++DD+H+   +E VK ++
Subjt:  AIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHI---DEIVKKKE

C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A1.2e-1638.93Show/hide
Query:  IPPPPP-----------FKPSP----PPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGE
        +PPPPP             P P    PPP PSP NH+  IV++F+S G  +FF    +AA+ CF+KK+KK    +  A  IH D HRKV E +  G HG 
Subjt:  IPPPPP-----------FKPSP----PPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGE

Query:  QAVVVTIEDDVHIDEIVKKKE-HRHGCGLHGKHEGGNSSTMEVAASSNS
        +  ++++EDD+HI+E +KK E      GLH  +  GN+  ++    S+S
Subjt:  QAVVVTIEDDVHIDEIVKKKE-HRHGCGLHGKHEGGNSSTMEVAASSNS

Q8LBX7 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 65.6e-1137.63Show/hide
Query:  PSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEIVKKKE
        P+P+PD+ T ++V+VF+SLG C+ F   +   I   IKKR +    +E +  + VD H K+ E +  G +G+++VV+++EDDV I++ +K++E
Subjt:  PSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEIVKKKE

Q9FI79 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 75.2e-1748.57Show/hide
Query:  PPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEI
        PPPPP    PPPP+P+P +H  +I++V ISLGS LFF   + AA+ C++KKR+K+S+  EI   I  D H KV E +  G HGEQ  VV +E+D+H+ E 
Subjt:  PPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEI

Query:  VKKKE
        + K E
Subjt:  VKKKE

Arabidopsis top hitse value%identityAlignment
AT1G43790.1 tracheary element differentiation-related 64.0e-1237.63Show/hide
Query:  PSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEIVKKKE
        P+P+PD+ T ++V+VF+SLG C+ F   +   I   IKKR +    +E +  + VD H K+ E +  G +G+++VV+++EDDV I++ +K++E
Subjt:  PSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEIVKKKE

AT5G48920.1 tracheary element differentiation-related 73.7e-1848.57Show/hide
Query:  PPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEI
        PPPPP    PPPP+P+P +H  +I++V ISLGS LFF   + AA+ C++KKR+K+S+  EI   I  D H KV E +  G HGEQ  VV +E+D+H+ E 
Subjt:  PPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHIDEI

Query:  VKKKE
        + K E
Subjt:  VKKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGGAAATGGTTCCATTCTCACTCGCATCCCTCCGCCCCCGCCCTTTAAGCCATCACCGCCGCCGCCATCTCCATCACCAGACAACCACACGGCAATTATCGT
AATCGTTTTCATTTCCTTAGGCTCATGCCTTTTCTTCTTCACACTCGTCGTAGCTGCAATTTGTTGTTTCATCAAAAAGAGAAAGAAGACATCATCCCCTCAAGAAATTG
CAGGGGTGATCCATGTCGATGGACATAGGAAGGTCCATGAAGATGTTGCACACGGTGCCCATGGAGAACAGGCCGTGGTGGTGACGATCGAGGACGATGTCCATATCGAC
GAAATAGTTAAGAAGAAAGAGCATAGGCATGGCTGTGGCTTGCATGGGAAGCATGAAGGAGGCAATTCTAGCACAATGGAAGTAGCAGCTTCTTCTAATTCTACTTCAGA
TTCCAATCTTAGCCATCACCAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGGAAATGGTTCCATTCTCACTCGCATCCCTCCGCCCCCGCCCTTTAAGCCATCACCGCCGCCGCCATCTCCATCACCAGACAACCACACGGCAATTATCGT
AATCGTTTTCATTTCCTTAGGCTCATGCCTTTTCTTCTTCACACTCGTCGTAGCTGCAATTTGTTGTTTCATCAAAAAGAGAAAGAAGACATCATCCCCTCAAGAAATTG
CAGGGGTGATCCATGTCGATGGACATAGGAAGGTCCATGAAGATGTTGCACACGGTGCCCATGGAGAACAGGCCGTGGTGGTGACGATCGAGGACGATGTCCATATCGAC
GAAATAGTTAAGAAGAAAGAGCATAGGCATGGCTGTGGCTTGCATGGGAAGCATGAAGGAGGCAATTCTAGCACAATGGAAGTAGCAGCTTCTTCTAATTCTACTTCAGA
TTCCAATCTTAGCCATCACCAATCCTAA
Protein sequenceShow/hide protein sequence
MAAGNGSILTRIPPPPPFKPSPPPPSPSPDNHTAIIVIVFISLGSCLFFFTLVVAAICCFIKKRKKTSSPQEIAGVIHVDGHRKVHEDVAHGAHGEQAVVVTIEDDVHID
EIVKKKEHRHGCGLHGKHEGGNSSTMEVAASSNSTSDSNLSHHQS