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Spg018139 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018139
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold9:28773655..28780264
RNA-Seq ExpressionSpg018139
SyntenySpg018139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.8e-0730.51Show/hide
Query:  NLRDAVSAPNSPLV--VREFYAHFGEET-TSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKIS----------
        N +   + P  P+V  VREFYA+  +    ++ ++G  + +    IN  + L    +    F+  E ITE  L  VLE VA  G +W +S          
Subjt:  NLRDAVSAPNSPLV--VREFYAHFGEET-TSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKIS----------

Query:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA
                            T  KT             +G  +NVGR+I +EI ACA +  G LFFPSLIT+LC+ A
Subjt:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-0524.7Show/hide
Query:  NLRDAVSAPNSPLV--VREFYAHFGE-ETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQ-LAEVLELVAHPGTKWKIS----------
        N +   + P  P+V  VREFYA+  + E  ++ ++G  + +    IN  + L    +    F+  + IT+Q L  VLE VA  G +W +S          
Subjt:  NLRDAVSAPNSPLV--VREFYAHFGE-ETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQ-LAEVLELVAHPGTKWKIS----------

Query:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGLLAKKIAAPRPSTHPDVATTSE
                            T  KT             +G  +NVGR+I +EI ACA +  G LFFPSLIT+LC+ A        AP       +  T E
Subjt:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGLLAKKIAAPRPSTHPDVATTSE

Query:  AAPSTAQQQEDGEDQLVVSQLLTLGPYEIKKGVLDISETTTTKEEAQEKTTADPQQQPPPQQQAADQPSTSAQPQIPKDSLRDLRLDHEYLMQQAQAYLI
                     D + V+++   GP          +E+T     ++  T +  +      QQ        +Q ++ +  +  L L H +  +Q Q +  
Subjt:  AAPSTAQQQEDGEDQLVVSQLLTLGPYEIKKGVLDISETTTTKEEAQEKTTADPQQQPPPQQQAADQPSTSAQPQIPKDSLRDLRLDHEYLMQQAQAYLI

Query:  YAQNRDHAIREIFAVFVENIDEVLPSFP
        Y++ RD A+++       N    +P+FP
Subjt:  YAQNRDHAIREIFAVFVENIDEVLPSFP

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.0e-0631.29Show/hide
Query:  LVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKISPTKVKT------------------
        L+VREFY +    +  ++ ++G  +   A  IN  Y L  L +    FV  E ITE +LA VLE VA  G +W +S   V T                  
Subjt:  LVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKISPTKVKT------------------

Query:  ------------------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA
                                 G  +N+GR+I  EI ACA +  G LFFPSLI ++C+ A
Subjt:  ------------------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.9e-0532.53Show/hide
Query:  PLVVREFY-AHFGEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTKVKTL
        P VV +FY  H  E   ++  KG+ + F    IN  Y +    +  GN ++++P  E +   L+++A PGT+W +SP  ++TL
Subjt:  PLVVREFY-AHFGEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTKVKTL

XP_038902322.1 protein PXR1-like [Benincasa hispida]8.5e-0533.33Show/hide
Query:  VVREFY-AHFGEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTKVKTL
        VVR+FY     E   ++  KG+ + F A  IN  Y +    +  GN ++E+P  E +A+ L ++  P T+W +SP  + TL
Subjt:  VVREFY-AHFGEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTKVKTL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)8.9e-0830.51Show/hide
Query:  NLRDAVSAPNSPLV--VREFYAHFGEET-TSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKIS----------
        N +   + P  P+V  VREFYA+  +    ++ ++G  + +    IN  + L    +    F+  E ITE  L  VLE VA  G +W +S          
Subjt:  NLRDAVSAPNSPLV--VREFYAHFGEET-TSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKIS----------

Query:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA
                            T  KT             +G  +NVGR+I +EI ACA +  G LFFPSLIT+LC+ A
Subjt:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA

A0A2P5BCG4 Uncharacterized protein (Fragment)6.4e-0624.7Show/hide
Query:  NLRDAVSAPNSPLV--VREFYAHFGE-ETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQ-LAEVLELVAHPGTKWKIS----------
        N +   + P  P+V  VREFYA+  + E  ++ ++G  + +    IN  + L    +    F+  + IT+Q L  VLE VA  G +W +S          
Subjt:  NLRDAVSAPNSPLV--VREFYAHFGE-ETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQ-LAEVLELVAHPGTKWKIS----------

Query:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGLLAKKIAAPRPSTHPDVATTSE
                            T  KT             +G  +NVGR+I +EI ACA +  G LFFPSLIT+LC+ A        AP       +  T E
Subjt:  -------------------PTKVKT-------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGLLAKKIAAPRPSTHPDVATTSE

Query:  AAPSTAQQQEDGEDQLVVSQLLTLGPYEIKKGVLDISETTTTKEEAQEKTTADPQQQPPPQQQAADQPSTSAQPQIPKDSLRDLRLDHEYLMQQAQAYLI
                     D + V+++   GP          +E+T     ++  T +  +      QQ        +Q ++ +  +  L L H +  +Q Q +  
Subjt:  AAPSTAQQQEDGEDQLVVSQLLTLGPYEIKKGVLDISETTTTKEEAQEKTTADPQQQPPPQQQAADQPSTSAQPQIPKDSLRDLRLDHEYLMQQAQAYLI

Query:  YAQNRDHAIREIFAVFVENIDEVLPSFP
        Y++ RD A+++       N    +P+FP
Subjt:  YAQNRDHAIREIFAVFVENIDEVLPSFP

A0A2P5BNT0 Uncharacterized protein (Fragment)9.8e-0731.29Show/hide
Query:  LVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKISPTKVKT------------------
        L+VREFY +    +  ++ ++G  +   A  IN  Y L  L +    FV  E ITE +LA VLE VA  G +W +S   V T                  
Subjt:  LVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITE-QLAEVLELVAHPGTKWKISPTKVKT------------------

Query:  ------------------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA
                                 G  +N+GR+I  EI ACA +  G LFFPSLI ++C+ A
Subjt:  ------------------------LGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLCKGA

A0A5J5PJ67 Uncharacterized protein1.6e-0427.38Show/hide
Query:  DAVSAPNSPLVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTK--------VKTLG
        DA S P+  ++VREFYA    ++ T + I+ K +   +  IN  +NLP + E     +M     + L +VL++V + G +W I   +        +K++G
Subjt:  DAVSAPNSPLVVREFYAHF-GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTK--------VKTLG

Query:  ----------------------------------LELNVGRIIKAEIEACARKPVGKLFFPSLITKLC
                                            +NVG+II  EI  CA+K     +FPSL T LC
Subjt:  ----------------------------------LELNVGRIIKAEIEACARKPVGKLFFPSLITKLC

A0A7J6G6G2 Fanconi-associated nuclease1.2e-0430.37Show/hide
Query:  VVREFYAHF--GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLA-EVLELVAHPGTKWKIS------------PTKVKTLGLELN
        VV+EFYA+F   E    I ++   + F    IN  + L ++            +T++L  +++  +  PG +W I               ++K L  E+N
Subjt:  VVREFYAHF--GEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLA-EVLELVAHPGTKWKIS------------PTKVKTLGLELN

Query:  VGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGL
        VG+++   I  CA +  GKLFFP LIT+LC+ AG+
Subjt:  VGRIIKAEIEACARKPVGKLFFPSLITKLCKGAGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGCAAGGGGAAACCCCTGCACAAGCCTCCAGAACTGCAAGGAGGCAACAGCCAGAGAGAAAGGGGACTTCGTTTTGGGACTTTTTGGAGCCGACAACAGAGGA
AAAACAGAGCATTTTGGAGCTGAAGCAAAGGGAGCAAGTTGGAAATCAACCCATTGTTCGTGGGGATCGTGACGGGGACATTCGGTCTCGGCCTACAACGAGTTTAATTC
CTCTTTCCCTCACTTTAGTTAGTTTTTATGGCTATTTTAGACTATTGCTATATTGTAACCTTCGAGATGCTGTGAGCGCCCCAAACAGCCCCTTAGTGGTGCGAGAGTTT
TACGCACACTTCGGTGAAGAGACCACCAGCATCAACATTAAGGGCAAGGTAATACAATTCTTTGCCCTTTATATTAATCGTGCTTACAATCTGCCTTCTTTGCGAGAGCG
TGTTGGAAATTTTGTCATGGAAGAACCCATAACAGAGCAGTTGGCAGAGGTACTGGAATTGGTGGCACACCCTGGCACCAAGTGGAAGATTTCACCCACGAAGGTGAAAA
CTCTGGGACTGGAGCTCAATGTGGGTCGCATAATCAAGGCAGAAATAGAAGCTTGCGCCCGGAAGCCAGTGGGGAAGCTATTCTTTCCATCCCTCATCACCAAACTCTGC
AAGGGAGCAGGATTACTGGCGAAAAAGATAGCAGCCCCTAGGCCTTCTACGCATCCAGATGTGGCTACAACATCTGAGGCAGCACCTTCCACTGCGCAGCAACAAGAAGA
CGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTTGGTCCCTATGAAATCAAGAAAGGCGTTCTTGATATTTCAGAGACGACAACAACGAAAGAAGAAGCACAAG
AGAAGACAACTGCAGACCCTCAACAGCAGCCACCACCACAGCAGCAAGCCGCTGATCAGCCATCAACCTCAGCTCAACCGCAGATTCCTAAAGATAGCCTTCGCGATCTG
AGATTGGATCATGAATACCTGATGCAGCAGGCGCAAGCATATCTAATATATGCTCAAAATAGAGACCACGCCATCAGGGAAATATTTGCTGTCTTTGTGGAGAACATTGA
TGAAGTACTACCGTCATTTCCGCACATCAGACTTTTCCCACCTTTAGATGATGAAGGAGGACCCTCCAGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGCAAGGGGAAACCCCTGCACAAGCCTCCAGAACTGCAAGGAGGCAACAGCCAGAGAGAAAGGGGACTTCGTTTTGGGACTTTTTGGAGCCGACAACAGAGGA
AAAACAGAGCATTTTGGAGCTGAAGCAAAGGGAGCAAGTTGGAAATCAACCCATTGTTCGTGGGGATCGTGACGGGGACATTCGGTCTCGGCCTACAACGAGTTTAATTC
CTCTTTCCCTCACTTTAGTTAGTTTTTATGGCTATTTTAGACTATTGCTATATTGTAACCTTCGAGATGCTGTGAGCGCCCCAAACAGCCCCTTAGTGGTGCGAGAGTTT
TACGCACACTTCGGTGAAGAGACCACCAGCATCAACATTAAGGGCAAGGTAATACAATTCTTTGCCCTTTATATTAATCGTGCTTACAATCTGCCTTCTTTGCGAGAGCG
TGTTGGAAATTTTGTCATGGAAGAACCCATAACAGAGCAGTTGGCAGAGGTACTGGAATTGGTGGCACACCCTGGCACCAAGTGGAAGATTTCACCCACGAAGGTGAAAA
CTCTGGGACTGGAGCTCAATGTGGGTCGCATAATCAAGGCAGAAATAGAAGCTTGCGCCCGGAAGCCAGTGGGGAAGCTATTCTTTCCATCCCTCATCACCAAACTCTGC
AAGGGAGCAGGATTACTGGCGAAAAAGATAGCAGCCCCTAGGCCTTCTACGCATCCAGATGTGGCTACAACATCTGAGGCAGCACCTTCCACTGCGCAGCAACAAGAAGA
CGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTTGGTCCCTATGAAATCAAGAAAGGCGTTCTTGATATTTCAGAGACGACAACAACGAAAGAAGAAGCACAAG
AGAAGACAACTGCAGACCCTCAACAGCAGCCACCACCACAGCAGCAAGCCGCTGATCAGCCATCAACCTCAGCTCAACCGCAGATTCCTAAAGATAGCCTTCGCGATCTG
AGATTGGATCATGAATACCTGATGCAGCAGGCGCAAGCATATCTAATATATGCTCAAAATAGAGACCACGCCATCAGGGAAATATTTGCTGTCTTTGTGGAGAACATTGA
TGAAGTACTACCGTCATTTCCGCACATCAGACTTTTCCCACCTTTAGATGATGAAGGAGGACCCTCCAGAACTTAA
Protein sequenceShow/hide protein sequence
MKVQGETPAQASRTARRQQPERKGTSFWDFLEPTTEEKQSILELKQREQVGNQPIVRGDRDGDIRSRPTTSLIPLSLTLVSFYGYFRLLLYCNLRDAVSAPNSPLVVREF
YAHFGEETTSINIKGKVIQFFALYINRAYNLPSLRERVGNFVMEEPITEQLAEVLELVAHPGTKWKISPTKVKTLGLELNVGRIIKAEIEACARKPVGKLFFPSLITKLC
KGAGLLAKKIAAPRPSTHPDVATTSEAAPSTAQQQEDGEDQLVVSQLLTLGPYEIKKGVLDISETTTTKEEAQEKTTADPQQQPPPQQQAADQPSTSAQPQIPKDSLRDL
RLDHEYLMQQAQAYLIYAQNRDHAIREIFAVFVENIDEVLPSFPHIRLFPPLDDEGGPSRT