; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018156 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018156
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:26885187..26886652
RNA-Seq ExpressionSpg018156
SyntenySpg018156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.5e-1535.17Show/hide
Query:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHS-YWRK
        Y + A+  ++EQL   + EV IEGA W++S     T     LK  A IW  F+    +P+TH  TV++DRVLL+++IL  +S+++  I   EI +    +
Subjt:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHS-YWRK

Query:  KVGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR
        K G L+FP+ IT L  KA VP + ++  + + G I + +++R+ +
Subjt:  KVGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR

KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]3.8e-1647Show/hide
Query:  GAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPNTITMLCQKAGVPMNA
        G+QW + K    + +  YLK  AN+WL F+    +PT+H  T+S +R+LL++AIL   SI+VGIII  EIH Y +KKVG  +FP+ IT LC +A V   A
Subjt:  GAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPNTITMLCQKAGVPMNA

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.7e-1738.62Show/hide
Query:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN
        +   L   +  V + GA+W +S     T   + L   A +W  F+K HLLPTTH  TVS+DR+LL+ ++L   SI+VG +I SEI +   +K G LFFP+
Subjt:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN

Query:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ
         IT LC+ A  P    +  L + G ID+  +AR+ +   T+ T Q
Subjt:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1537.93Show/hide
Query:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN
        + + L   +  V   GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG +I SEI +   +K G LFFP+
Subjt:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN

Query:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ
         IT LC+ A  P    +  L + G ID+  +AR+ +   T+ T Q
Subjt:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]4.5e-1736.59Show/hide
Query:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKK
        ++E     +  +L   +  V I GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS++RVLL++++L   SI+VG II  EI +Y  +K
Subjt:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKK

Query:  VGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQRTQETSQGGLVCDIHQMHSSR
         G LFFP+ IT +C  A  P    +  L + G ID+  +AR+      +Q G     H+  SSR
Subjt:  VGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQRTQETSQGGLVCDIHQMHSSR

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.7e-1738.62Show/hide
Query:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN
        +   L   +  V + GA+W +S     T   + L   A +W  F+K HLLPTTH  TVS+DR+LL+ ++L   SI+VG +I SEI +   +K G LFFP+
Subjt:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN

Query:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ
         IT LC+ A  P    +  L + G ID+  +AR+ +   T+ T Q
Subjt:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ

A0A2P5BCG4 Uncharacterized protein (Fragment)7.0e-1637.93Show/hide
Query:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN
        + + L   +  V   GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG +I SEI +   +K G LFFP+
Subjt:  SNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPN

Query:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ
         IT LC+ A  P    +  L + G ID+  +AR+ +   T+ T Q
Subjt:  TITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ

A0A2P5CPE8 Uncharacterized protein2.2e-1736.59Show/hide
Query:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKK
        ++E     +  +L   +  V I GA+W +S     T   + L   A +W  F+K  LLPTTH  TVS++RVLL++++L   SI+VG II  EI +Y  +K
Subjt:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKK

Query:  VGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQRTQETSQGGLVCDIHQMHSSR
         G LFFP+ IT +C  A  P    +  L + G ID+  +AR+      +Q G     H+  SSR
Subjt:  VGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQRTQETSQGGLVCDIHQMHSSR

A0A2P5DXM3 Uncharacterized protein2.7e-1534.39Show/hide
Query:  QLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPNTIT
        +L   +  V   GA+W +S     T   + L   A +W  F+K  LLPTTH   VS+DR+LL+ ++L   SI+VG +I SEI +   +K G LFFP+ IT
Subjt:  QLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFFPNTIT

Query:  MLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ---------------GGLVCDIHQMHS--SRIEFAEKQFQTFWNYVK
         LC+ A   +N E   L + G ID+  +AR+ +   T+ T Q               G ++  +  +    S+ E   KQ Q FW Y K
Subjt:  MLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR---TQETSQ---------------GGLVCDIHQMHS--SRIEFAEKQFQTFWNYVK

W9QTD9 Uncharacterized protein1.2e-1535.17Show/hide
Query:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHS-YWRK
        Y + A+  ++EQL   + EV IEGA W++S     T     LK  A IW  F+    +P+TH  TV++DRVLL+++IL  +S+++  I   EI +    +
Subjt:  YNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHS-YWRK

Query:  KVGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR
        K G L+FP+ IT L  KA VP + ++  + + G I + +++R+ +
Subjt:  KVGKLFFPNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGGGAGGAAAGTGAGAGTTACTGAGGAAGAAGTAGTGTCGATTACATCTGAGGCACCAAAGAAAAAGACGAAGAAGAGGAAGACACTGGAAGAAAG
AGAGGCTAAGAGAAGAAGGCGACAACAGAGGGCTGAAGTCGAAGAGGTTGTAAGGAAAGTAGTGGAAGACATTGCTGATGATGCGATTGAAGAAGAACAACCAAAGGAGC
CTGAGGAAAAAGATCCTGAGAAGAATGAGTCGGTGGTTGAAAATCCGCAAGATGTGCAAGAAGAGCGAGCGAAAGATGTGCAGAAGCAGGGAAACGGTCAAGAGCAACAG
ATTCAGGCGGAAGATGTGATTCCGGAAGTTCCACGACGTCGCTGTCGAAAGCAGAAGGCCGATCAAATCAAGGTAATCCCAACAGACACTCCTTCGTCGGCGACGACTGA
TTCGGAAAAAGAAAACTCGAAAAAAGAAGAACAAGAGAAAAATGGGTCGGAGGACCAGGTAAGAGAGGAAACAGAAAAGAAGGCAGAGGAAGAAATTTTGGCAAAGCAGC
AAGAAGACAAGGGCAAAGGAGTTGTTGAAGCAATAGCAGAGGCAGAAGAGGGTGATATTGAGGAATGTTGTATAATCGCTTCATCAATGATCTTGCCCGAGCAAAATTTC
CCACACGCCGGATATAATGAGATGGCGGCAGTGCCATCTAATGAGCAGTTAAATGCAGCTGTTCGAGAGGTGGGAATCGAGGGGGCCCAGTGGCGTTTGTCGAAAACAGA
GAAGAGAACCTTCCAAGCGGCCTATCTTAAGAGTGAAGCCAACATTTGGTTGGGATTCATAAAACTGCACCTGCTGCCAACAACTCATGACTTTACTGTCTCACGTGATC
GAGTTCTTCTGGTGTTTGCTATTTTGAGATCATTAAGTATAGATGTTGGAATAATTATCTCCAGTGAAATTCATTCCTATTGGAGGAAGAAGGTGGGTAAGCTCTTTTTC
CCAAACACAATAACTATGCTGTGTCAAAAAGCTGGGGTTCCCATGAATGCAGAGGATGTCACTTTGATGGATAAGGGAATAATAGACTCGCCGAACCTGGCAAGGCTTCA
AAGGACTCAAGAAACGAGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCATTCCAGTCGAATAGAGTTTGCCGAAAAACAATTCCAAACCTTCTGGAATTATGTTA
AGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGGGAGGAAAGTGAGAGTTACTGAGGAAGAAGTAGTGTCGATTACATCTGAGGCACCAAAGAAAAAGACGAAGAAGAGGAAGACACTGGAAGAAAG
AGAGGCTAAGAGAAGAAGGCGACAACAGAGGGCTGAAGTCGAAGAGGTTGTAAGGAAAGTAGTGGAAGACATTGCTGATGATGCGATTGAAGAAGAACAACCAAAGGAGC
CTGAGGAAAAAGATCCTGAGAAGAATGAGTCGGTGGTTGAAAATCCGCAAGATGTGCAAGAAGAGCGAGCGAAAGATGTGCAGAAGCAGGGAAACGGTCAAGAGCAACAG
ATTCAGGCGGAAGATGTGATTCCGGAAGTTCCACGACGTCGCTGTCGAAAGCAGAAGGCCGATCAAATCAAGGTAATCCCAACAGACACTCCTTCGTCGGCGACGACTGA
TTCGGAAAAAGAAAACTCGAAAAAAGAAGAACAAGAGAAAAATGGGTCGGAGGACCAGGTAAGAGAGGAAACAGAAAAGAAGGCAGAGGAAGAAATTTTGGCAAAGCAGC
AAGAAGACAAGGGCAAAGGAGTTGTTGAAGCAATAGCAGAGGCAGAAGAGGGTGATATTGAGGAATGTTGTATAATCGCTTCATCAATGATCTTGCCCGAGCAAAATTTC
CCACACGCCGGATATAATGAGATGGCGGCAGTGCCATCTAATGAGCAGTTAAATGCAGCTGTTCGAGAGGTGGGAATCGAGGGGGCCCAGTGGCGTTTGTCGAAAACAGA
GAAGAGAACCTTCCAAGCGGCCTATCTTAAGAGTGAAGCCAACATTTGGTTGGGATTCATAAAACTGCACCTGCTGCCAACAACTCATGACTTTACTGTCTCACGTGATC
GAGTTCTTCTGGTGTTTGCTATTTTGAGATCATTAAGTATAGATGTTGGAATAATTATCTCCAGTGAAATTCATTCCTATTGGAGGAAGAAGGTGGGTAAGCTCTTTTTC
CCAAACACAATAACTATGCTGTGTCAAAAAGCTGGGGTTCCCATGAATGCAGAGGATGTCACTTTGATGGATAAGGGAATAATAGACTCGCCGAACCTGGCAAGGCTTCA
AAGGACTCAAGAAACGAGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCATTCCAGTCGAATAGAGTTTGCCGAAAAACAATTCCAAACCTTCTGGAATTATGTTA
AGTGA
Protein sequenceShow/hide protein sequence
MAKTRGRKVRVTEEEVVSITSEAPKKKTKKRKTLEEREAKRRRRQQRAEVEEVVRKVVEDIADDAIEEEQPKEPEEKDPEKNESVVENPQDVQEERAKDVQKQGNGQEQQ
IQAEDVIPEVPRRRCRKQKADQIKVIPTDTPSSATTDSEKENSKKEEQEKNGSEDQVREETEKKAEEEILAKQQEDKGKGVVEAIAEAEEGDIEECCIIASSMILPEQNF
PHAGYNEMAAVPSNEQLNAAVREVGIEGAQWRLSKTEKRTFQAAYLKSEANIWLGFIKLHLLPTTHDFTVSRDRVLLVFAILRSLSIDVGIIISSEIHSYWRKKVGKLFF
PNTITMLCQKAGVPMNAEDVTLMDKGIIDSPNLARLQRTQETSQGGLVCDIHQMHSSRIEFAEKQFQTFWNYVK