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Spg018184 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018184
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold9:26959457..26964801
RNA-Seq ExpressionSpg018184
SyntenySpg018184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033523.1 hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa]1.9e-0938.78Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MV+FTE SD+ K+ L++L D+ Q + S  +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N N E TLGRR+I +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]7.9e-1139.6Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG
        MV+FTE SD+ K+ L++L D+ Q + SG +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N NPE TL RR+I +  
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG

Query:  F
        F
Subjt:  F

TYJ95665.1 hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa]1.9e-0938.78Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MV+FTE SD+ K+ L++L D+ Q + S  +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N N E TLGRR+I +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

TYK21863.1 uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]7.9e-1139.6Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG
        MV+FTE SD+ K+ L++L D+ Q + SG +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N NPE TL RR+I +  
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG

Query:  F
        F
Subjt:  F

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.2e-1346.94Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MVHFTE SD+ K+ L++L D  Q ++ G ILP+      +I++S +  D   FL +WS ER    NSS+K W L SS+H K  N +PE TLGRRII +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein3.8e-1139.6Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG
        MV+FTE SD+ K+ L++L D+ Q + SG +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N NPE TL RR+I +  
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG

Query:  F
        F
Subjt:  F

A0A5A7SST7 PMD domain-containing protein9.4e-1038.78Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MV+FTE SD+ K+ L++L D+ Q + S  +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N N E TLGRR+I +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

A0A5A7U4C3 Uncharacterized protein2.1e-0938.78Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MV+FTE SD+ K+ L++L D  Q + SG +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N NPE TLG ++I +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

A0A5D3BB02 PMD domain-containing protein9.4e-1038.78Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN
        MV+FTE SD+ K+ L++L D+ Q + S  +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N N E TLGRR+I +
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIEN

A0A5D3DEA3 Uncharacterized protein3.8e-1139.6Show/hide
Query:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG
        MV+FTE SD+ K+ L++L D+ Q + SG +LP+      +I++S +  +    L +WS E++   NS +  W L SS+H K  N NPE TL RR+I +  
Subjt:  MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIE----TSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQG

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATTTCACAGAGCTTTCAGATAACGGGAAGAAAAGTCTGGTTGTTCTACTGGACAAATATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCCAT
TGTAGAGTCAAACCTTGAATTGGACAAATCTCATTTTCTTTCGGAATGGTCTATAGAAAGGACTCAAGGCCAAAACTCTTCCATTAAGGTTTGGATTCTACGATCTTCTT
TACACAGAAAGAAGTCAAATGTCAATCCAGAACCGACGTTGGGGCGTCGCATCATTGAAAATCAGGGTTTCACTTTCGCCTACAAGTCTGCAACGTTGCTCTTCCCCCAA
TCGGATCTCTTCGTTGCTCTTGTTCTTGTTCTCTCAATCAGATCTCTTTGTCTCTCTTCTCCATCGATTTATTCTTCTCTCAGTCGTATTGATTTGCCTTCTTCCTTCAT
GTGGTTTGAATCTGATGCGTGTAAAGGAAAAGAGGTTGGTCTTCCTCCTTTTTGCCTCTCCTTCCTCATACCCGACGGCTGCCTTCCCCAACTCCCATCTCCGGCGACGT
CGACGTTCCTCCGGCGAGCAGAGCGTGTGCAGCGGCGGATTCCGGCAGGTCTCGGCGAGCGTCCTTCGACGGTACAGCGAGTGGCGACGGCAGGTGACAGCGCGGCGACG
GCGATCCTTCGGCGAGCTCCTCGACAGCAACGTGGTTTGACAAGGGTAGCGGCTCGATTTCAGGCGGCTTTTGGGCGTGGGTCTTGCGATTTTTCTAGCGGTGGGTCTTC
TCCGATTAGTGGCGGCGTTCCAGCAGGTGTGTGGTCGGTTTTTAGCAGTTTTCCGGCGAGGTCGGAGTATTGCAGCAGCGTTTTGGGCGGTTTCAATCTTGGCGATTGGA
GCCGAACTCGTGAAATCTTAGAACGAAACAAGCTTGAAGGTTATTTCTTGGCAATAGTTTGGTTGAAATCGAGGGCGGCGTTGCTTGAGTTAGTTGGGATTCTAGATCGA
GAATATTTAAGCCGAGGGGCTGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATAATCTGCTTCCCCATCTCCTCCTAGTAAGGTTTTGGAAAACATACATTCATCG
ACCTTACTTTGAGAAGATTGCTTCAAATACACCTTATTCTAAACATTGCATCAAAAGTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATTTCACAGAGCTTTCAGATAACGGGAAGAAAAGTCTGGTTGTTCTACTGGACAAATATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCCAT
TGTAGAGTCAAACCTTGAATTGGACAAATCTCATTTTCTTTCGGAATGGTCTATAGAAAGGACTCAAGGCCAAAACTCTTCCATTAAGGTTTGGATTCTACGATCTTCTT
TACACAGAAAGAAGTCAAATGTCAATCCAGAACCGACGTTGGGGCGTCGCATCATTGAAAATCAGGGTTTCACTTTCGCCTACAAGTCTGCAACGTTGCTCTTCCCCCAA
TCGGATCTCTTCGTTGCTCTTGTTCTTGTTCTCTCAATCAGATCTCTTTGTCTCTCTTCTCCATCGATTTATTCTTCTCTCAGTCGTATTGATTTGCCTTCTTCCTTCAT
GTGGTTTGAATCTGATGCGTGTAAAGGAAAAGAGGTTGGTCTTCCTCCTTTTTGCCTCTCCTTCCTCATACCCGACGGCTGCCTTCCCCAACTCCCATCTCCGGCGACGT
CGACGTTCCTCCGGCGAGCAGAGCGTGTGCAGCGGCGGATTCCGGCAGGTCTCGGCGAGCGTCCTTCGACGGTACAGCGAGTGGCGACGGCAGGTGACAGCGCGGCGACG
GCGATCCTTCGGCGAGCTCCTCGACAGCAACGTGGTTTGACAAGGGTAGCGGCTCGATTTCAGGCGGCTTTTGGGCGTGGGTCTTGCGATTTTTCTAGCGGTGGGTCTTC
TCCGATTAGTGGCGGCGTTCCAGCAGGTGTGTGGTCGGTTTTTAGCAGTTTTCCGGCGAGGTCGGAGTATTGCAGCAGCGTTTTGGGCGGTTTCAATCTTGGCGATTGGA
GCCGAACTCGTGAAATCTTAGAACGAAACAAGCTTGAAGGTTATTTCTTGGCAATAGTTTGGTTGAAATCGAGGGCGGCGTTGCTTGAGTTAGTTGGGATTCTAGATCGA
GAATATTTAAGCCGAGGGGCTGACTCCTTCGTGGAAGGAAACTTGTTTTCTTCACATAATCTGCTTCCCCATCTCCTCCTAGTAAGGTTTTGGAAAACATACATTCATCG
ACCTTACTTTGAGAAGATTGCTTCAAATACACCTTATTCTAAACATTGCATCAAAAGTATGTAG
Protein sequenceShow/hide protein sequence
MVHFTELSDNGKKSLVVLLDKYQPIKSGTILPIETSIVESNLELDKSHFLSEWSIERTQGQNSSIKVWILRSSLHRKKSNVNPEPTLGRRIIENQGFTFAYKSATLLFPQ
SDLFVALVLVLSIRSLCLSSPSIYSSLSRIDLPSSFMWFESDACKGKEVGLPPFCLSFLIPDGCLPQLPSPATSTFLRRAERVQRRIPAGLGERPSTVQRVATAGDSAAT
AILRRAPRQQRGLTRVAARFQAAFGRGSCDFSSGGSSPISGGVPAGVWSVFSSFPARSEYCSSVLGGFNLGDWSRTREILERNKLEGYFLAIVWLKSRAALLELVGILDR
EYLSRGADSFVEGNLFSSHNLLPHLLLVRFWKTYIHRPYFEKIASNTPYSKHCIKSM