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Spg018193 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018193
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold9:31549862..31552003
RNA-Seq ExpressionSpg018193
SyntenySpg018193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032479.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-0634.82Show/hide
Query:  EFRLARLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISYKQEFIVSSGLRMSYLGREEIGESTDQGT-SQDCYIPLLTLSVLHDNDAIMRAGGPHYDK
        + +  R+  + SI  +PQ     ++  LA++ H  +  ++Y  E + +   ++     + + E     T  +    PLLTLSVLH+NDA++    PHYDK
Subjt:  EFRLARLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISYKQEFIVSSGLRMSYLGREEIGESTDQGT-SQDCYIPLLTLSVLHDNDAIMRAGGPHYDK

Query:  DDGSAGRAPLHR
        DDGS GR PLHR
Subjt:  DDGSAGRAPLHR

KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.1e-1269.81Show/hide
Query:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        YI LLTLSVL DN+ ++        KDDGSAGR PLHRR SKRWLYWACPTQR
Subjt:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]1.0e-1582Show/hide
Query:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        L TLSVL DNDA++ AGGPHYDKDDG+A RAPLHRR SKRWLYWACPT R
Subjt:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]1.0e-1582Show/hide
Query:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        L TLSVL DNDA++ AGGPHYDKDDG+A RAPLHRR SKRWLYWACPT R
Subjt:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]2.0e-1171.7Show/hide
Query:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        YI LLTLSVL DN+ IM        KDDGSAGR PLHRR SKRWLYWAC TQR
Subjt:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

TrEMBL top hitse value%identityAlignment
A0A5A7STG0 DNA/RNA polymerases superfamily protein5.6e-0734.82Show/hide
Query:  EFRLARLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISYKQEFIVSSGLRMSYLGREEIGESTDQGT-SQDCYIPLLTLSVLHDNDAIMRAGGPHYDK
        + +  R+  + SI  +PQ     ++  LA++ H  +  ++Y  E + +   ++     + + E     T  +    PLLTLSVLH+NDA++    PHYDK
Subjt:  EFRLARLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISYKQEFIVSSGLRMSYLGREEIGESTDQGT-SQDCYIPLLTLSVLHDNDAIMRAGGPHYDK

Query:  DDGSAGRAPLHR
        DDGS GR PLHR
Subjt:  DDGSAGRAPLHR

A0A5A7TCY8 DNA/RNA polymerases superfamily protein4.4e-1269.81Show/hide
Query:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        YI LLTLSVL DN+ ++        KDDGSAGR PLHRR SKRWLYWACPTQR
Subjt:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

A0A5A7VGQ5 Uncharacterized protein5.0e-1682Show/hide
Query:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        L TLSVL DNDA++ AGGPHYDKDDG+A RAPLHRR SKRWLYWACPT R
Subjt:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

A0A5D3BG85 Uncharacterized protein5.0e-1682Show/hide
Query:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        L TLSVL DNDA++ AGGPHYDKDDG+A RAPLHRR SKRWLYWACPT R
Subjt:  LLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein9.8e-1271.7Show/hide
Query:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR
        YI LLTLSVL DN+ IM        KDDGSAGR PLHRR SKRWLYWAC TQR
Subjt:  YIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGRAPLHRRASKRWLYWACPTQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGCGAATTCCGTCTTGCGAGACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCGTATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGAATGAGTTACCTAGGCAGAGAGGAAATAGGCGAGTCTACAGACCAGGGAACTA
GCCAAGACTGTTATATTCCGTTGTTGACGTTGAGTGTACTCCATGACAACGATGCTATCATGCGTGCTGGGGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGG
GCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGAGCGAATTCCGTCTTGCGAGACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCGTATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGAATGAGTTACCTAGGCAGAGAGGAAATAGGCGAGTCTACAGACCAGGGAACTA
GCCAAGACTGTTATATTCCGTTGTTGACGTTGAGTGTACTCCATGACAACGATGCTATCATGCGTGCTGGGGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGG
GCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGA
Protein sequenceShow/hide protein sequence
MGRSEFRLARLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISYKQEFIVSSGLRMSYLGREEIGESTDQGTSQDCYIPLLTLSVLHDNDAIMRAGGPHYDKDDGSAGR
APLHRRASKRWLYWACPTQR