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Spg018202 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018202
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationscaffold9:27416653..27422106
RNA-Seq ExpressionSpg018202
SyntenySpg018202
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016442 - RISC complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046978.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]3.8e-2251.8Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

KAA0059771.1 uncharacterized protein E6C27_scaffold108G00260 [Cucumis melo var. makuwa]8.5e-2261.9Show/hide
Query:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP
        KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRRL+  E ++SN+ER+ 
Subjt:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP

Query:  EQSNN
        EQSN+
Subjt:  EQSNN

TYJ99784.1 uncharacterized protein E5676_scaffold896G00240 [Cucumis melo var. makuwa]8.5e-2261.9Show/hide
Query:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP
        KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRRL+  E ++SN+ER+ 
Subjt:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP

Query:  EQSNN
        EQSN+
Subjt:  EQSNN

TYK04806.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]3.8e-2251.8Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

TYK21104.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]1.1e-2151.08Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L ++EIC++VLG R GHVKG GWGPRP+NA+N+   +  +K   AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+E++ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

TrEMBL top hitse value%identityAlignment
A0A5A7TVR8 Formin-like protein 4 isoform X21.8e-2251.8Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

A0A5A7V207 Uncharacterized protein4.1e-2261.9Show/hide
Query:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP
        KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRRL+  E ++SN+ER+ 
Subjt:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP

Query:  EQSNN
        EQSN+
Subjt:  EQSNN

A0A5D3BL79 Uncharacterized protein4.1e-2261.9Show/hide
Query:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP
        KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRRL+  E ++SN+ER+ 
Subjt:  KDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTP

Query:  EQSNN
        EQSN+
Subjt:  EQSNN

A0A5D3C2Z5 Formin-like protein 4 isoform X21.8e-2251.8Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

A0A5D3DBZ5 Formin-like protein 4 isoform X25.4e-2251.08Show/hide
Query:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA
        +G++  E+     EL +L    ++ G    +K   DEMV LKT SSQ+G E L ++EIC++VLG R GHVKG GWGPRP+NA+N+   +  +K   AQ+A
Subjt:  QGQQKGEVSPYLAELLRLEDQAKQQGLGRWSK---DEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVA

Query:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
         LQSIVESQQATIE ILRRL+  E ++SN+E++ EQSN+
Subjt:  QLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

SwissProt top hitse value%identityAlignment
Q8VZG7 Ribonuclease TUDOR 13.7e-0464.86Show/hide
Query:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK
        KVR  GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK

Q9FLT0 Ribonuclease TUDOR 22.2e-0464.86Show/hide
Query:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK
        KVR  GQQ + +VSPY+AEL +LE+QA+Q+G GRWSK
Subjt:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK

Arabidopsis top hitse value%identityAlignment
AT5G07350.1 TUDOR-SN protein 12.6e-0564.86Show/hide
Query:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK
        KVR  GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK

AT5G07350.2 TUDOR-SN protein 12.6e-0564.86Show/hide
Query:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK
        KVR  GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK

AT5G61780.1 TUDOR-SN protein 21.6e-0564.86Show/hide
Query:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK
        KVR  GQQ + +VSPY+AEL +LE+QA+Q+G GRWSK
Subjt:  KVRGQGQQ-KGEVSPYLAELLRLEDQAKQQGLGRWSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCGTAGTCCCACCACTACGTTCCCAAAACTCAGAGGATAGCGGGGAAACCAAGTGGTGGTGTCCGTTGTTGATTTCAGAGTCGCCAACGGAGGTCGCCGGCGAAGCTCC
AGTCAGTGAGGTCGCCGTCGAAGCTCCGGTCACTGAGGTCGCCGTTGAAGCTCAGGTTTTTTCCCTTTTCCCTCTTCTATTTTCAGCCATCGCCCCAACCCACTCTCACT
CGATTGTAACCCTCACTCGATTGAAGGTGGTCGTCGAAGCTCCCGTGGCTGAGGTCACCTATGTCGTCGTCGTCGAAGCTCAGGACGCCTACGTCGCTGCCGAAGTTGAA
GTCACTAAGGTAAGGGGGCAAGGTCAGCAGAAGGGTGAAGTGAGTCCTTACCTTGCAGAACTACTACGTCTTGAAGACCAAGCAAAGCAACAAGGTCTTGGGCGTTGGAG
CAAGGACGAAATGGTGGCATTAAAAACTGCTTCATCACAAGACGGCGGTGAAACTCTTCAGGACAAAGAGATATGTGAACAAGTACTAGGCACGCGACCTGGGCATGTGA
AGGGCCTTGGTTGGGGACCGAGACCAAGAAATGCTAAGAATGATCATGCAAGCTACCAAAAATCTAAAGCGACAGAGGCTCAAGTTGCTCAATTGCAAAGTATAGTTGAA
TCACAACAAGCGACAATTGAAGAAATTTTAAGAAGGTTGGCAAGTGGAGAAGGTTCATCGTCGAATGTGGAAAGGACTCCAGAACAGTCAAATAATGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
GTCGTAGTCCCACCACTACGTTCCCAAAACTCAGAGGATAGCGGGGAAACCAAGTGGTGGTGTCCGTTGTTGATTTCAGAGTCGCCAACGGAGGTCGCCGGCGAAGCTCC
AGTCAGTGAGGTCGCCGTCGAAGCTCCGGTCACTGAGGTCGCCGTTGAAGCTCAGGTTTTTTCCCTTTTCCCTCTTCTATTTTCAGCCATCGCCCCAACCCACTCTCACT
CGATTGTAACCCTCACTCGATTGAAGGTGGTCGTCGAAGCTCCCGTGGCTGAGGTCACCTATGTCGTCGTCGTCGAAGCTCAGGACGCCTACGTCGCTGCCGAAGTTGAA
GTCACTAAGGTAAGGGGGCAAGGTCAGCAGAAGGGTGAAGTGAGTCCTTACCTTGCAGAACTACTACGTCTTGAAGACCAAGCAAAGCAACAAGGTCTTGGGCGTTGGAG
CAAGGACGAAATGGTGGCATTAAAAACTGCTTCATCACAAGACGGCGGTGAAACTCTTCAGGACAAAGAGATATGTGAACAAGTACTAGGCACGCGACCTGGGCATGTGA
AGGGCCTTGGTTGGGGACCGAGACCAAGAAATGCTAAGAATGATCATGCAAGCTACCAAAAATCTAAAGCGACAGAGGCTCAAGTTGCTCAATTGCAAAGTATAGTTGAA
TCACAACAAGCGACAATTGAAGAAATTTTAAGAAGGTTGGCAAGTGGAGAAGGTTCATCGTCGAATGTGGAAAGGACTCCAGAACAGTCAAATAATGAAAATTAA
Protein sequenceShow/hide protein sequence
VVVPPLRSQNSEDSGETKWWCPLLISESPTEVAGEAPVSEVAVEAPVTEVAVEAQVFSLFPLLFSAIAPTHSHSIVTLTRLKVVVEAPVAEVTYVVVVEAQDAYVAAEVE
VTKVRGQGQQKGEVSPYLAELLRLEDQAKQQGLGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVE
SQQATIEEILRRLASGEGSSSNVERTPEQSNNEN