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Spg018205 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018205
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold9:28824036..28828713
RNA-Seq ExpressionSpg018205
SyntenySpg018205
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067174.1 protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo var. makuwa]3.2e-1558.73Show/hide
Query:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV
        GTYTT+E D + RFKF+FM++AASID W +C+PVIS+DG ++KNK+ GTL++ACT +G+  +V
Subjt:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV

TYK08019.1 uncharacterized protein E5676_scaffold265G001640 [Cucumis melo var. makuwa]5.5e-1550Show/hide
Query:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN
        ++  GTYT +E D   RFKF+FM++AASID W +C+PVISVDG ++KNK+ GTL++ACT +G+  +V L  +    +N
Subjt:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN

TYK26023.1 protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo var. makuwa]3.2e-1558.73Show/hide
Query:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV
        GTYTT+E D + RFKF+FM++AASID W +C+PVIS+DG ++KNK+ GTL++ACT +G+  +V
Subjt:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.5e-1550Show/hide
Query:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN
        ++  GTYT +E D   RFKF+FM++AASID W +C+PVISVDG ++KNK+ GTL++ACT +G+  +V L  +    +N
Subjt:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]1.9e-1530.66Show/hide
Query:  EFVNSDGIDALTDIVPISEGCVFSCKK---------SQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTVVSRGR
        E V+S   D     +PI  G  FS K          + + ++      SN     F +       GW     V    G  +  KF         +V  G 
Subjt:  EFVNSDGIDALTDIVPISEGCVFSCKK---------SQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTVVSRGR

Query:  YCYTQRGAVASSSRGETKFEFVNSDGIDALTDIVPISEGCVFSCKKSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLL
           T    VA  ++G ++  ++          + P S   +    ++  GTYTTQE D   RFK++F+++AASID WK C P++SVDG  LKN F GTL 
Subjt:  YCYTQRGAVASSSRGETKFEFVNSDGIDALTDIVPISEGCVFSCKKSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLL

Query:  TACTFEGSLMVV
        +ACT EG+  +V
Subjt:  TACTFEGSLMVV

TrEMBL top hitse value%identityAlignment
A0A5A7VII8 Protein FAR1-RELATED SEQUENCE 5-like1.6e-1558.73Show/hide
Query:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV
        GTYTT+E D + RFKF+FM++AASID W +C+PVIS+DG ++KNK+ GTL++ACT +G+  +V
Subjt:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV

A0A5D3CCH7 MULE domain-containing protein2.7e-1550Show/hide
Query:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN
        ++  GTYT +E D   RFKF+FM++AASID W +C+PVISVDG ++KNK+ GTL++ACT +G+  +V L  +    +N
Subjt:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN

A0A5D3CDB8 Uncharacterized protein2.7e-1550Show/hide
Query:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN
        ++  GTYT +E D   RFKF+FM++AASID W +C+PVISVDG ++KNK+ GTL++ACT +G+  +V L  +    +N
Subjt:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN

A0A5D3DQU8 Protein FAR1-RELATED SEQUENCE 5-like1.6e-1558.73Show/hide
Query:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV
        GTYTT+E D + RFKF+FM++AASID W +C+PVIS+DG ++KNK+ GTL++ACT +G+  +V
Subjt:  GTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVV

A0A5D3E198 MuDRA-like transposase2.7e-1550Show/hide
Query:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN
        ++  GTYT +E D   RFKF+FM++AASID W +C+PVISVDG ++KNK+ GTL++ACT +G+  +V L  +    +N
Subjt:  KSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGACATCAAATTACGATTTTGTTCGGTGGTGTTTGGGACGTGGCGGGACTCTACAGTGGTTTCAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTC
TCAACACAAGGTATGTGCTGCGAACTACCTCAATTTGGCTGATAGTAATAGTATCTGCCGGTTGACACTCATTAGGAACTGTTGTGGACATGCAGGAGGTAGATACTGTT
ATACACAACGAGGGGCAGTTGCAAGCTCATCCCGGGGGGAGACAAAATTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGACCGACATAGTACCTATATCGGAGGGG
TGCGTATTTTCGTGTAAAAAATCTCAAGAAGGTACGTACACCACCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGCATTGCAGCATCCATAGACGG
GTGGAAACACTGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACAGTGGTTTCAAGAGGTAGATACTGTT
ATACACAACGAGGGGCAGTTGCAAGCTCATCCCGGGGGGAGACAAAATTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGACCGACATAGTACCTATATCGGAGGGG
TGCGTATTTTCGTGTAAAAAATCTCAAGAAGGTACGTACACCACCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGCATTGCAGCATCCATAGACGG
GTGGAAACACTGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGGTAGCCTCATGGTGGTGT
TCTTGAAGAATTCAGAGTCGTCAGACGACAATATGTTTCTCACCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGACATCAAATTACGATTTTGTTCGGTGGTGTTTGGGACGTGGCGGGACTCTACAGTGGTTTCAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTC
TCAACACAAGGTATGTGCTGCGAACTACCTCAATTTGGCTGATAGTAATAGTATCTGCCGGTTGACACTCATTAGGAACTGTTGTGGACATGCAGGAGGTAGATACTGTT
ATACACAACGAGGGGCAGTTGCAAGCTCATCCCGGGGGGAGACAAAATTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGACCGACATAGTACCTATATCGGAGGGG
TGCGTATTTTCGTGTAAAAAATCTCAAGAAGGTACGTACACCACCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGCATTGCAGCATCCATAGACGG
GTGGAAACACTGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACAGTGGTTTCAAGAGGTAGATACTGTT
ATACACAACGAGGGGCAGTTGCAAGCTCATCCCGGGGGGAGACAAAATTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGACCGACATAGTACCTATATCGGAGGGG
TGCGTATTTTCGTGTAAAAAATCTCAAGAAGGTACGTACACCACCCAGGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGCATTGCAGCATCCATAGACGG
GTGGAAACACTGTCTCCCGGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGGTAGCCTCATGGTGGTGT
TCTTGAAGAATTCAGAGTCGTCAGACGACAATATGTTTCTCACCGCTTAA
Protein sequenceShow/hide protein sequence
MAGHQITILFGGVWDVAGLYSGFKSGVVTCPCDANLSQHKVCAANYLNLADSNSICRLTLIRNCCGHAGGRYCYTQRGAVASSSRGETKFEFVNSDGIDALTDIVPISEG
CVFSCKKSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTVVSRGRYCYTQRGAVASSSRGETKFEFVNSDGIDALTDIVPISEG
CVFSCKKSQEGTYTTQEVDSNDRFKFFFMSIAASIDGWKHCLPVISVDGTSLKNKFSGTLLTACTFEGSLMVVFLKNSESSDDNMFLTA