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Spg018219 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018219
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationscaffold3:6968656..6969096
RNA-Seq ExpressionSpg018219
SyntenySpg018219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042447.1 hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa]2.5e-2654.7Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR
        MA T  IP+MAI I+ILL N    +  +N+TA EWC G  ENCL+GD + DSEFLM T++SRML      QT +T +PN+ SV  CGR PRYD+C+G+KR
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR

Query:  VIKKPENCGIFNRGHPC
         I  PENC + NR +PC
Subjt:  VIKKPENCGIFNRGHPC

KAE8649335.1 hypothetical protein Csa_014907 [Cucumis sativus]4.3e-2655Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR
        MA T  IP+MAI I+ LL NPT  +  +N+T SEWC G  ENCLVGD + DSEFLM TE+SRML      QT  T  PN+ SV  CGR PRYD+C G++R
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR

Query:  VIKKPENCGIFNRGHPCPKL
         I  PENC + NR +P  +L
Subjt:  VIKKPENCGIFNRGHPCPKL

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3767.2Show/hide
Query:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRY
        MG +SNTMAATLL PSM I  +ILLLN PTIS AAINKTA+EWCDG LENCL+GDLN DSEFLM TE+SRML     FQT NT +P+K S   C R PRY
Subjt:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRY

Query:  DNCLGDKRVIKKPENCGIFNRGHPC
        D CLG K +I  PENC   NR +PC
Subjt:  DNCLGDKRVIKKPENCGIFNRGHPC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3667.2Show/hide
Query:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRY
        MG +SNTMAATLL PSM I  +ILLLN PTIS AAINKTA+EWCDG LENCL+GDLN DSEFLM TE+SRML     FQT NT +P+K S   C R PRY
Subjt:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRY

Query:  DNCLGDKRVIKKPENCGIFNRGHPC
        D+CLG K  I  PENC   NR +PC
Subjt:  DNCLGDKRVIKKPENCGIFNRGHPC

KGN53798.1 hypothetical protein Csa_014747 [Cucumis sativus]5.4e-2961.48Show/hide
Query:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDG-GLENCLVGDLNPDSEFLMGTESSRML-RKSIKFQTSNTYSPNKASVKSCGRLPRYDNC
        SN+MAATL +PSMA  I ILLLNP IS+A +N T S+WCD  GLENCLVGDLN  SEFLM TESS ML  + + FQT      NK SV  C R PRYD+C
Subjt:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDG-GLENCLVGDLNPDSEFLMGTESSRML-RKSIKFQTSNTYSPNKASVKSCGRLPRYDNC

Query:  LGDKRVIKKPENCGIFNRGHPC
        LG KR I  PE C   NR +PC
Subjt:  LGDKRVIKKPENCGIFNRGHPC

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein2.4e-2756.41Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR
        MA T  IP+MAI I+ LL NPT  +  +N+T SEWC G  ENCLVGD + DSEFLM TE+SRML      QT  T  PN+ SV  CGR PRYD+C G++R
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR

Query:  VIKKPENCGIFNRGHPC
         I  PENC + NR +PC
Subjt:  VIKKPENCGIFNRGHPC

A0A0A0KW62 Uncharacterized protein2.6e-2961.48Show/hide
Query:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDG-GLENCLVGDLNPDSEFLMGTESSRML-RKSIKFQTSNTYSPNKASVKSCGRLPRYDNC
        SN+MAATL +PSMA  I ILLLNP IS+A +N T S+WCD  GLENCLVGDLN  SEFLM TESS ML  + + FQT      NK SV  C R PRYD+C
Subjt:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDG-GLENCLVGDLNPDSEFLMGTESSRML-RKSIKFQTSNTYSPNKASVKSCGRLPRYDNC

Query:  LGDKRVIKKPENCGIFNRGHPC
        LG KR I  PE C   NR +PC
Subjt:  LGDKRVIKKPENCGIFNRGHPC

A0A5D3BZL1 Uncharacterized protein1.2e-2654.7Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR
        MA T  IP+MAI I+ILL N    +  +N+TA EWC G  ENCL+GD + DSEFLM T++SRML      QT +T +PN+ SV  CGR PRYD+C+G+KR
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR

Query:  VIKKPENCGIFNRGHPC
         I  PENC + NR +PC
Subjt:  VIKKPENCGIFNRGHPC

A0A6J1G927 uncharacterized protein LOC1114520442.4e-1951.28Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR
        MAA  +I   A+ IMILLLNPT SDA  +              L+GD + DSEFLM +  SR+L  S  FQTS T   NKAS   CGR PRYD+CLG K 
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKR

Query:  VIKKPENCGIFNRGHPC
            PENCG FNR +PC
Subjt:  VIKKPENCGIFNRGHPC

A0A6J1KBP5 uncharacterized protein LOC1114928544.6e-1850.86Show/hide
Query:  AATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKRV
        AA ++IP+ A+ IMILLLNPT SDA                 L+GD + DSEFLM +  SR+L  S  FQTS T   NKAS   C R PRYD+CLG K  
Subjt:  AATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKSCGRLPRYDNCLGDKRV

Query:  IKKPENCGIFNRGHPC
           PENCG FNR +PC
Subjt:  IKKPENCGIFNRGHPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACTCCCAATACAAATTCGTCCGCACCAAGTCTTCTCATTATCATTCACATGGGATTTTCATCCAACACCATGGCTGCAACACTGCTGATACCATCAATGGCAAT
TCCGATCATGATTCTGCTGCTGAACCCAACCATTTCTGATGCGGCCATCAACAAAACCGCATCCGAGTGGTGCGACGGTGGCCTGGAAAACTGCCTTGTCGGCGACCTGA
ACCCCGATTCGGAGTTTCTGATGGGGACAGAGAGCAGCCGGATGCTGCGGAAGTCCATTAAGTTCCAAACTTCCAACACCTACAGCCCTAACAAAGCTTCGGTTAAATCA
TGTGGTCGGCTGCCGCGCTACGACAACTGCCTTGGTGACAAAAGGGTTATCAAGAAGCCTGAAAATTGCGGCATTTTCAATCGCGGACATCCCTGTCCGAAGCTCCTCTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAGCACTCCCAATACAAATTCGTCCGCACCAAGTCTTCTCATTATCATTCACATGGGATTTTCATCCAACACCATGGCTGCAACACTGCTGATACCATCAATGGCAAT
TCCGATCATGATTCTGCTGCTGAACCCAACCATTTCTGATGCGGCCATCAACAAAACCGCATCCGAGTGGTGCGACGGTGGCCTGGAAAACTGCCTTGTCGGCGACCTGA
ACCCCGATTCGGAGTTTCTGATGGGGACAGAGAGCAGCCGGATGCTGCGGAAGTCCATTAAGTTCCAAACTTCCAACACCTACAGCCCTAACAAAGCTTCGGTTAAATCA
TGTGGTCGGCTGCCGCGCTACGACAACTGCCTTGGTGACAAAAGGGTTATCAAGAAGCCTGAAAATTGCGGCATTTTCAATCGCGGACATCCCTGTCCGAAGCTCCTCTA
A
Protein sequenceShow/hide protein sequence
MSTPNTNSSAPSLLIIIHMGFSSNTMAATLLIPSMAIPIMILLLNPTISDAAINKTASEWCDGGLENCLVGDLNPDSEFLMGTESSRMLRKSIKFQTSNTYSPNKASVKS
CGRLPRYDNCLGDKRVIKKPENCGIFNRGHPCPKLL