; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018222 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018222
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationscaffold3:15436965..15437294
RNA-Seq ExpressionSpg018222
SyntenySpg018222
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056655.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]3.0e-3272.48Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MSPI KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+RSD  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GEREKAVST
         +RE AVS+
Subjt:  GEREKAVST

KAG6607102.1 hypothetical protein SDJN03_00444, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3990Show/hide
Query:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREKAVS
        +SWKQSTRR VLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPT+++G G HRR+EELFQETADYIVLLKNQVFVLQRLIEFYGS ERE AVS
Subjt:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREKAVS

KAG7036793.1 hypothetical protein SDJN02_00413, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3484Show/hide
Query:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREKAVS
        +SWKQSTRR VLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPT+++G G HRR+EELFQETADYI      VFVLQRLIEFYGS ERE AVS
Subjt:  ISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDG-GGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREKAVS

TYK04615.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]2.5e-3171.56Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MS I KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+RSD  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GEREKAVST
         +RE AVS+
Subjt:  GEREKAVST

XP_041003862.1 uncharacterized protein LOC121249205 [Juglans microcarpa x Juglans regia]4.3e-1550Show/hide
Query:  MSPITKKHRIS--WKQSTRRTVLRSRYGSRILRARR-IHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        MS  ++KH+ S  + + TRRT  R R  +R  R RR    NGG+ C S++SA+LEAL++LIP  S+G    + ++LFQETA+YI+LL+ QV +LQRL+EF
Subjt:  MSPITKKHRIS--WKQSTRRTVLRSRYGSRILRARR-IHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGEREKAV
        YGS  RE  V
Subjt:  YGSGEREKAV

TrEMBL top hitse value%identityAlignment
A0A2P5AW87 Transcription factor UPBEAT-like protein1.1e-1352.29Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSR-YGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYG
        MS  TK      K + RRT  R R   SR   ARR   NGG  CSS VS +LEAL+ LIP     G   + ++LFQ+TADYIVLL+ QV +LQ+LIEFYG
Subjt:  MSPITKKHRISWKQSTRRTVLRSR-YGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SGEREKAVS
        S + E AVS
Subjt:  SGEREKAVS

A0A314YX88 Uncharacterized protein4.7e-1553.7Show/hide
Query:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        +P   K  ++ ++ TRRT  R R GSR   A RR   NGG   K  S  VSA+LE L+SLI + S  G   +AEELFQETADYIVLL+ QV +LQRL+E 
Subjt:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGEREK
        YGS E+EK
Subjt:  YGSGEREK

A0A5A7UT08 Transcription factor UPBEAT1-like1.4e-3272.48Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MSPI KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+RSD  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GEREKAVST
         +RE AVS+
Subjt:  GEREKAVST

A0A5D3BZU8 Transcription factor UPBEAT1-like1.2e-3171.56Show/hide
Query:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS
        MS I KKHRI WKQSTRRTVL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP+RSD  G RRAE+LF++TADYIVLLK+QVFVLQRLIEFYGS
Subjt:  MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGS

Query:  GEREKAVST
         +RE AVS+
Subjt:  GEREKAVST

A0A6J5UGL2 Uncharacterized protein2.0e-1351.4Show/hide
Query:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF
        +P   K  ++ ++ TRR   R R GSR   A RR   NGG   K  S  VSA+LE L+SLI + S  G   +A+ELFQETADYIVLL+ QV +LQRL+E 
Subjt:  SPITKKHRISWKQSTRRTVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGERE
        YGS E+E
Subjt:  YGSGERE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein1.9e-0840.86Show/hide
Query:  KQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREK
        K  T R   R+   SR         NG       V  +L AL+SL+P   + GG    EELFQETA+YIV L+ QV VL++LIE Y +   +K
Subjt:  KQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREK

AT5G39240.1 unknown protein4.2e-0838.14Show/hide
Query:  RSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRS-------------DGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREK
        RSR G R  +     +  G       S +L+AL+SL+P  S             +       E+LFQETADYIV L+ QV VLQ+LIE YGS ++++
Subjt:  RSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRS-------------DGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCATTACAAAGAAACACAGAATATCATGGAAGCAATCGACGAGAAGAACGGTTTTGCGATCGAGGTACGGTTCTCGGATCCTCAGAGCTCGAAGAATCCACAA
AAATGGCGGAAAGGCGTGCTCCTCAGACGTATCGGCGAGGCTTGAGGCGCTCCAGAGCCTCATTCCGACTCGTAGCGACGGTGGAGGTCATCGGAGAGCGGAGGAGTTGT
TTCAAGAAACGGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGGCGAGAGAGAAAAAGCCGTATCAACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCATTACAAAGAAACACAGAATATCATGGAAGCAATCGACGAGAAGAACGGTTTTGCGATCGAGGTACGGTTCTCGGATCCTCAGAGCTCGAAGAATCCACAA
AAATGGCGGAAAGGCGTGCTCCTCAGACGTATCGGCGAGGCTTGAGGCGCTCCAGAGCCTCATTCCGACTCGTAGCGACGGTGGAGGTCATCGGAGAGCGGAGGAGTTGT
TTCAAGAAACGGCGGATTACATCGTGCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGGCGAGAGAGAAAAAGCCGTATCAACGTAG
Protein sequenceShow/hide protein sequence
MSPITKKHRISWKQSTRRTVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTRSDGGGHRRAEELFQETADYIVLLKNQVFVLQRLIEFYGSGEREKAVST