; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018240 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018240
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA ligase
Genome locationscaffold3:6235407..6241070
RNA-Seq ExpressionSpg018240
SyntenySpg018240
Gene Ontology termsGO:0006266 - DNA ligation (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0003910 - DNA ligase (ATP) activity (molecular function)
InterPro domainsIPR012309 - DNA ligase, ATP-dependent, C-terminal
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5535353.1 hypothetical protein RHGRI_023200 [Rhododendron griersonianum]1.9e-4744.02Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        +SPFL+ACY+PDT++FQSVCRVMSGFSD+FYIE +                                        + R +L                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                      L+F+ +        T+V                            MKE+FSGDK+LS KP YYQTAEVPDMWF PE+VWEIRGAD 
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS
        TVSPVH+AA+GLVHPSRGISIRFPRF+RS+ DR PEECST+TD+A+MF+SQTRKMDV++
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS

XP_008444061.1 PREDICTED: DNA ligase 1 isoform X1 [Cucumis melo]6.0e-4946.92Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+P T +FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAEVPDMWFLP+VVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG
        TVSPVHQAAVGLVHP RGISIRFPRFIRS+PDRNPEECSTATDIAEMFNSQTRKMDVASG
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG

XP_008444062.1 PREDICTED: DNA ligase 1 isoform X2 [Cucumis melo]6.0e-4946.92Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+P T +FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAEVPDMWFLP+VVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG
        TVSPVHQAAVGLVHP RGISIRFPRFIRS+PDRNPEECSTATDIAEMFNSQTRKMDVASG
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG

XP_022158502.1 DNA ligase 6-like isoform X2 [Momordica charantia]2.5e-4746.56Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+PD E+FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAE PDMWFLPEVVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD
        TVSPVHQAAVGLVHPSRGISIRFPRFIRS+ DRNPEECSTATDI  MFNSQTRKMD VASGD
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD

XP_038878216.1 DNA ligase 6-like isoform X1 [Benincasa hispida]3.8e-5144.86Show/hide
Query:  RVAHKQLLPANDDSDSTPLTA-----ALLFRFSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDG
        +V    L   ND  D  P+ A       +  FSPFLMACY+PDTE+FQSVCRVMSGFSDAFYI+                                    
Subjt:  RVAHKQLLPANDDSDSTPLTA-----ALLFRFSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDG

Query:  EQLSCIIQRVLLTPKFDTHPQRHYISDKKGAKDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKI
                                                                                                  MKE+FSGD I
Subjt:  EQLSCIIQRVLLTPKFDTHPQRHYISDKKGAKDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKI

Query:  LSIKPAYYQTAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASGD
        L  KPAYYQTAEVPDMWFLP+ VWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRS+PDRNPEECSTA DIAEMFNSQTRKMDVASGD
Subjt:  LSIKPAYYQTAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASGD

TrEMBL top hitse value%identityAlignment
A0A1S3B9K2 DNA ligase2.9e-4946.92Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+P T +FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAEVPDMWFLP+VVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG
        TVSPVHQAAVGLVHP RGISIRFPRFIRS+PDRNPEECSTATDIAEMFNSQTRKMDVASG
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG

A0A1S3BA94 DNA ligase2.9e-4946.92Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+P T +FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAEVPDMWFLP+VVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG
        TVSPVHQAAVGLVHP RGISIRFPRFIRS+PDRNPEECSTATDIAEMFNSQTRKMDVASG
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASG

A0A6A2WAQ2 DNA ligase7.9e-4744.75Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        +SPFLMACY+PDTEDFQSVCRVMSGFSD+FY E                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGD+IL+ KPAYYQTAEVPDMWF PE+VWEIRGAD 
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDV
        TVSPVHQAA+GLVHPSRGIS+RFPRFIRS+ DRNPEECSTATDIAEMF+SQTRKMDV
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDV

A0A6J1DXE4 DNA ligase1.2e-4746.56Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+PD E+FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAE PDMWFLPEVVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD
        TVSPVHQAAVGLVHPSRGISIRFPRFIRS+ DRNPEECSTATDI  MFNSQTRKMD VASGD
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD

A0A6J1E130 DNA ligase1.2e-4746.56Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        FSPFLMACY+PD E+FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE+FSGDKIL  KP YY+TAE PDMWFLPEVVWEIRGADL
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD
        TVSPVHQAAVGLVHPSRGISIRFPRFIRS+ DRNPEECSTATDI  MFNSQTRKMD VASGD
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD-VASGD

SwissProt top hitse value%identityAlignment
F4HPZ9 DNA ligase 68.8e-4339.77Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        +SPFLMAC++P+TE+FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE++S DKIL+ KP YY+T E PDMWF  EVVWEIRGAD 
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS
        TVSPVH A++GLVHPSRGIS+RFPRFI  + DRNPEECSTATDIAEMF++QTRKM++ S
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS

P51892 DNA ligase 13.7e-1741.84Show/hide
Query:  FSGDKILSIKPAYYQ--TAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS
        F  D ++    +YY+  +A  PD WF P  VWE++ ADL++SPVH+AA+GLV   +GIS+RFPRF+R   D+ PEE + +  +A+++  Q +  + +S
Subjt:  FSGDKILSIKPAYYQ--TAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS

Q42572 DNA ligase 17.5e-1844.19Show/hide
Query:  KILSIKPAYYQTAEV--PDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ
        ++++    YY+  +   PD+WF P  VWE++ ADLT+SPVH+AA G+V P +GIS+RFPR +R   D+ PEE +++  IA+++ +Q
Subjt:  KILSIKPAYYQTAEV--PDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ

Q42572 DNA ligase 16.1e-0454.55Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIE
        +  FL+ACYD D E+FQS+C++ +GFSDA   E
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIE

Q6L195 DNA ligase3.7e-1741.76Show/hide
Query:  GDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD
        GDKI+  KPA   ++  PD W  P +V EIRGA++TVSPVH  A+ ++    G+++RFPR I+   D+ PE+ +T  +I EM+ +Q + ++
Subjt:  GDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMD

Q9W1H4 DNA ligase 13.7e-1746.67Show/hide
Query:  FSGDKILSIKPAYYQ--TAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ
        F G  + S   +YY+   +  PD WF P  VWE++ ADL++SP+H+AA+G+V   RGIS+RFPRFIR   D+N E  + A  +A M+ SQ
Subjt:  FSGDKILSIKPAYYQ--TAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ

Arabidopsis top hitse value%identityAlignment
AT1G08130.1 DNA ligase 15.3e-1944.19Show/hide
Query:  KILSIKPAYYQTAEV--PDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ
        ++++    YY+  +   PD+WF P  VWE++ ADLT+SPVH+AA G+V P +GIS+RFPR +R   D+ PEE +++  IA+++ +Q
Subjt:  KILSIKPAYYQTAEV--PDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ

AT1G08130.1 DNA ligase 14.4e-0554.55Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIE
        +  FL+ACYD D E+FQS+C++ +GFSDA   E
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIE

AT1G49250.1 ATP-dependent DNA ligase8.2e-2048.84Show/hide
Query:  KILSIKPAYYQTAE--VPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ
        K+++    YYQ      PD+W  P  VWE++ ADLTVSPV++ A+G+V P +GIS+RFPR +R   D+NPEE +T+  IAEM+ +Q
Subjt:  KILSIKPAYYQTAE--VPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQ

AT1G49250.1 ATP-dependent DNA ligase1.4e-0353.57Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSD
        F  +L+ACYD D E+FQS+C++ + FSD
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSD

AT1G66730.1 DNA LIGASE 66.2e-4439.77Show/hide
Query:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA
        +SPFLMAC++P+TE+FQSVCRVMSGFSDAFYIE                                                                   
Subjt:  FSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDDGDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGA

Query:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL
                                                                   MKE++S DKIL+ KP YY+T E PDMWF  EVVWEIRGAD 
Subjt:  KDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMKEYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADL

Query:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS
        TVSPVH A++GLVHPSRGIS+RFPRFI  + DRNPEECSTATDIAEMF++QTRKM++ S
Subjt:  TVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACTTGTCGAAATTCTCAGCCCGATACTAACCCAACTGACGGAAGGGAAAACGGACCTCCACGCGCCCTCCAGCTGCAGAAATCTCCGGCGGCGCGTGTGGCTCA
CAAGCAGCTACTTCCGGCGAACGACGACAGCGATTCGACTCCCCTGACGGCGGCGCTTCTCTTTAGGTTCAGTCCTTTCCTCATGGCTTGTTACGACCCAGACACTGAGG
ACTTTCAAAGCGTATGTCGTGTTATGTCGGGATTCTCTGATGCATTTTACATTGAGTGTCATTTGAGAAGAGCGGTTGCTGTAATTGATGAAAATAATCAAGATGATGAT
GGAGATAAAGAACAGTGGGAAGAAGATGTTGTATATATTGAACCGGATGATGGAGAACAACTTTCTTGCATCATTCAACGAGTTCTACTTACTCCTAAATTTGATACGCA
TCCTCAAAGACATTACATTAGTGACAAAAAGGGAGCCAAAGACAACTCAAAGGCTAGAGAAGGGCTCCTAAAGTGCGCCCTGAGATTTGTCGCCTTAGAGTGCGCCTTGC
GCTTTGGAAACACTATAGTGGCTAAAGAGTTTTGTAATTACTCGTGTGGACTTATTTACAGCTGGTGGTTCTGGCTCTTGTTTTCTTTGGGCTATTTTTTTTCTATGAAA
GAATATTTTTCTGGGGATAAGATTTTGTCTATAAAGCCAGCTTACTATCAAACTGCTGAGGTTCCTGATATGTGGTTCTTGCCAGAAGTTGTTTGGGAAATTAGAGGTGC
AGACTTAACAGTGTCACCAGTTCACCAGGCTGCTGTTGGTTTAGTTCATCCTTCTCGTGGCATCTCAATCAGGTTTCCGAGATTTATCCGTTCGCTTCCTGATAGAAATC
CTGAAGAATGTAGCACGGCTACAGATATAGCCGAAATGTTTAACTCTCAGACGAGGAAGATGGATGTTGCATCAGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACTTGTCGAAATTCTCAGCCCGATACTAACCCAACTGACGGAAGGGAAAACGGACCTCCACGCGCCCTCCAGCTGCAGAAATCTCCGGCGGCGCGTGTGGCTCA
CAAGCAGCTACTTCCGGCGAACGACGACAGCGATTCGACTCCCCTGACGGCGGCGCTTCTCTTTAGGTTCAGTCCTTTCCTCATGGCTTGTTACGACCCAGACACTGAGG
ACTTTCAAAGCGTATGTCGTGTTATGTCGGGATTCTCTGATGCATTTTACATTGAGTGTCATTTGAGAAGAGCGGTTGCTGTAATTGATGAAAATAATCAAGATGATGAT
GGAGATAAAGAACAGTGGGAAGAAGATGTTGTATATATTGAACCGGATGATGGAGAACAACTTTCTTGCATCATTCAACGAGTTCTACTTACTCCTAAATTTGATACGCA
TCCTCAAAGACATTACATTAGTGACAAAAAGGGAGCCAAAGACAACTCAAAGGCTAGAGAAGGGCTCCTAAAGTGCGCCCTGAGATTTGTCGCCTTAGAGTGCGCCTTGC
GCTTTGGAAACACTATAGTGGCTAAAGAGTTTTGTAATTACTCGTGTGGACTTATTTACAGCTGGTGGTTCTGGCTCTTGTTTTCTTTGGGCTATTTTTTTTCTATGAAA
GAATATTTTTCTGGGGATAAGATTTTGTCTATAAAGCCAGCTTACTATCAAACTGCTGAGGTTCCTGATATGTGGTTCTTGCCAGAAGTTGTTTGGGAAATTAGAGGTGC
AGACTTAACAGTGTCACCAGTTCACCAGGCTGCTGTTGGTTTAGTTCATCCTTCTCGTGGCATCTCAATCAGGTTTCCGAGATTTATCCGTTCGCTTCCTGATAGAAATC
CTGAAGAATGTAGCACGGCTACAGATATAGCCGAAATGTTTAACTCTCAGACGAGGAAGATGGATGTTGCATCAGGAGATTGA
Protein sequenceShow/hide protein sequence
MQTCRNSQPDTNPTDGRENGPPRALQLQKSPAARVAHKQLLPANDDSDSTPLTAALLFRFSPFLMACYDPDTEDFQSVCRVMSGFSDAFYIECHLRRAVAVIDENNQDDD
GDKEQWEEDVVYIEPDDGEQLSCIIQRVLLTPKFDTHPQRHYISDKKGAKDNSKAREGLLKCALRFVALECALRFGNTIVAKEFCNYSCGLIYSWWFWLLFSLGYFFSMK
EYFSGDKILSIKPAYYQTAEVPDMWFLPEVVWEIRGADLTVSPVHQAAVGLVHPSRGISIRFPRFIRSLPDRNPEECSTATDIAEMFNSQTRKMDVASGD