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Spg018247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:13503353..13510129
RNA-Seq ExpressionSpg018247
SyntenySpg018247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]2.0e-0940.66Show/hide
Query:  NEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK
        ++  N  +  + +EGAQW+ S  E  +F+   +K E   WL FV   LLP+TH S V++DR +L++AI+   SIDVGK++S  I    R K
Subjt:  NEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.0e-0840Show/hide
Query:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNC--WRKKG
        ++EQL V L EV +EGA W++S     T     LK  A  W  F+    +P+TH  TV++DRVLL+++IL  +S+++ +I   EI  C   RK+G
Subjt:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNC--WRKKG

KAB2005540.1 hypothetical protein ES319_D11G277400v1 [Gossypium barbadense]3.4e-0941.11Show/hide
Query:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKG-----PALSMAL
        G QW + K    + Q  YLKS    W  FV+   +P +H ST+S  R+L ++AIL   SI+VGKI+  EIH+C +KK      P+L+ +L
Subjt:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKG-----PALSMAL

KAG4128712.1 hypothetical protein ERO13_D09G037250v2 [Gossypium hirsutum]7.7e-0941.56Show/hide
Query:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK
        G+QW +      + +  YLK  A  W  F++   +P +H ST+S +R+ L++AIL+  SI+VGKI+  EIHNC +KK
Subjt:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]4.1e-1043.18Show/hide
Query:  LNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK
        L   L  V   G+QW + K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL++AIL   SI+VGKI+  EIHNC +KK
Subjt:  LNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein9.8e-1040.66Show/hide
Query:  NEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK
        ++  N  +  + +EGAQW+ S  E  +F+   +K E   WL FV   LLP+TH S V++DR +L++AI+   SIDVGK++S  I    R K
Subjt:  NEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK

A0A2P5AGA5 Uncharacterized protein (Fragment)8.3e-0940.62Show/hide
Query:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKGPAL
        +   L   L+ V V GA+W +S     T     L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L+  SI+VG+++ SEI  C  +K  AL
Subjt:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKGPAL

A0A5D2MA47 Uncharacterized protein2.0e-1043.18Show/hide
Query:  LNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK
        L   L  V   G+QW + K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL++AIL   SI+VGKI+  EIHNC +KK
Subjt:  LNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKK

A0A5J5PJ67 Uncharacterized protein1.7e-0941.11Show/hide
Query:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKG-----PALSMAL
        G QW + K    + Q  YLKS    W  FV+   +P +H ST+S  R+L ++AIL   SI+VGKI+  EIH+C +KK      P+L+ +L
Subjt:  GAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKG-----PALSMAL

W9QTD9 Uncharacterized protein4.8e-0940Show/hide
Query:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNC--WRKKG
        ++EQL V L EV +EGA W++S     T     LK  A  W  F+    +P+TH  TV++DRVLL+++IL  +S+++ +I   EI  C   RK+G
Subjt:  SNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNC--WRKKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGCGCCATCAAACGAACAACTCAACGTGACTTTGAAGGAGGTTGGTGTAGAGGGGGCTCAATGGAGGCTGTCAAAAATAGAGAAACGAACCTTCCAGTCTGT
GTACCTCAAGAGTGAGGCGAACACATGGCTAGGGTTTGTCAAGCTGTGTCTCCTTCCAACTACGCATGATTCTACAGTCTCTCGTGACCGGGTACTTCTGGTTTTTGCAA
TTCTCATGTCTTTAAGCATTGATGTAGGAAAGATTGTCTCCAGCGAAATTCACAATTGTTGGAGGAAAAAGGGTCCTGCCCTCTCTATGGCACTAGAGGGATTTTTGTTT
GCTGGTTGGACCACAAACAGGTTTTTCATTAGAGGAGCACTGATACTTAAGGAAGTAGAGGGGAGATTTCAGATCATAAATCCAACAAGATTTTGTGATCGTGGGGCTGC
TGTAAATCAAAGAAGTAAACCCAAAGCGTTGGCATTTCGATCAAGACTACATTCGACAATCGAGACCAAATTTGGGCAAAAACGGTGGAAAACAGCGACTGGAATAGTGA
AAACAGAGGCTAGAATCGCAGAAAAAAAAAGGCGAAAACACGCATTCAGGACGAAGGCTGACGTCAGTGCACGCGTCGCTGACATCAAGGAGGCGCGGTCCAGCAATCTG
AGAGGCGCGGTCCAAGCGGGGTGGTCTGGTCCGGTTGCGTGCAGGCATGGTTCGCGTGCGGTTCAGCAGTCAAGAGCCGGTTCGTTGACTGGGCCGAAAGACCTTCTGTG
GGAGCTGAAGCAAGGACGAGGACCGGGAATCTCACTTGGTGGCGTGGATATCGAGACGGGGACGTGCCGGCGTCTCGACTCTGATGACGAGCGTCTCGACACTGATGAGG
CTCCAGAGGAAGAATTGTCATTTTACTCTCTGGTTTCGCTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGCGCCATCAAACGAACAACTCAACGTGACTTTGAAGGAGGTTGGTGTAGAGGGGGCTCAATGGAGGCTGTCAAAAATAGAGAAACGAACCTTCCAGTCTGT
GTACCTCAAGAGTGAGGCGAACACATGGCTAGGGTTTGTCAAGCTGTGTCTCCTTCCAACTACGCATGATTCTACAGTCTCTCGTGACCGGGTACTTCTGGTTTTTGCAA
TTCTCATGTCTTTAAGCATTGATGTAGGAAAGATTGTCTCCAGCGAAATTCACAATTGTTGGAGGAAAAAGGGTCCTGCCCTCTCTATGGCACTAGAGGGATTTTTGTTT
GCTGGTTGGACCACAAACAGGTTTTTCATTAGAGGAGCACTGATACTTAAGGAAGTAGAGGGGAGATTTCAGATCATAAATCCAACAAGATTTTGTGATCGTGGGGCTGC
TGTAAATCAAAGAAGTAAACCCAAAGCGTTGGCATTTCGATCAAGACTACATTCGACAATCGAGACCAAATTTGGGCAAAAACGGTGGAAAACAGCGACTGGAATAGTGA
AAACAGAGGCTAGAATCGCAGAAAAAAAAAGGCGAAAACACGCATTCAGGACGAAGGCTGACGTCAGTGCACGCGTCGCTGACATCAAGGAGGCGCGGTCCAGCAATCTG
AGAGGCGCGGTCCAAGCGGGGTGGTCTGGTCCGGTTGCGTGCAGGCATGGTTCGCGTGCGGTTCAGCAGTCAAGAGCCGGTTCGTTGACTGGGCCGAAAGACCTTCTGTG
GGAGCTGAAGCAAGGACGAGGACCGGGAATCTCACTTGGTGGCGTGGATATCGAGACGGGGACGTGCCGGCGTCTCGACTCTGATGACGAGCGTCTCGACACTGATGAGG
CTCCAGAGGAAGAATTGTCATTTTACTCTCTGGTTTCGCTCGTTTAA
Protein sequenceShow/hide protein sequence
MAVAPSNEQLNVTLKEVGVEGAQWRLSKIEKRTFQSVYLKSEANTWLGFVKLCLLPTTHDSTVSRDRVLLVFAILMSLSIDVGKIVSSEIHNCWRKKGPALSMALEGFLF
AGWTTNRFFIRGALILKEVEGRFQIINPTRFCDRGAAVNQRSKPKALAFRSRLHSTIETKFGQKRWKTATGIVKTEARIAEKKRRKHAFRTKADVSARVADIKEARSSNL
RGAVQAGWSGPVACRHGSRAVQQSRAGSLTGPKDLLWELKQGRGPGISLGGVDIETGTCRRLDSDDERLDTDEAPEEELSFYSLVSLV