| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0041727.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.7e-30 | 47.37 | Show/hide |
Query: QRSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTS
++ + F QPR+ +T E S+ F + E T+ ++V EEVDNS + +QRTSVFDRIK TTR SVFQR+SMA +EENQC T
Subjt: QRSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTS
Query: TRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSLKFLLSKLEGSYTTLLHCSFFNFE
TR S F+RLS+STL+K + STS FDRLK+ +DQ +RKM +LK K F+ + D+K+ S V SRMKRK SV IN E S FL L HC FF F+
Subjt: TRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSLKFLLSKLEGSYTTLLHCSFFNFE
Query: GSHVALLRC
L RC
Subjt: GSHVALLRC
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| KAA0041771.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 6.1e-30 | 50.57 | Show/hide |
Query: RSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTST
+ K F QPR+ +T E ++F + E T+ ++V EE+DNS + +QRT VFDRIKP TTR SVFQR+SMA KEENQC ST
Subjt: RSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTST
Query: RPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSL
R S F+RLS+ST +K + TS FDRLK+ +DQ +R+M LK K F+E + D+K+ S V+SRMKRKFSV INTE SL
Subjt: RPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSL
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| KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.5e-31 | 45.66 | Show/hide |
Query: EEKDSQIAQLKSQIENQH----IAESSQTQRSKKF-------------SQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----------EEVDNS
+E+ + Q KS +H I+ + +R+KK QPRQ +T E F ++F H +E T + + EEVDNS
Subjt: EEKDSQIAQLKSQIENQH----IAESSQTQRSKKF-------------SQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----------EEVDNS
Query: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
+ +QRTSVFDRIKP TTR SVFQR+SMA +EENQC ST R S F+RLS+ST +K + STS FDRLK+ +DQ +R+M +LK K F+E + D+K+ S
Subjt: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
Query: VASRMKRKFSVLINTEGSL
V SRMKRK SV INTEGSL
Subjt: VASRMKRKFSVLINTEGSL
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| KAA0063719.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.7e-30 | 43.29 | Show/hide |
Query: VTVMMTETRTMEERMTEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIAESSQTQRSKKFSQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----
V MM T T + + + ++IN + ++ +L + I+ + + F QPRQ +T E ++F H KE + +
Subjt: VTVMMTETRTMEERMTEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIAESSQTQRSKKFSQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----
Query: ------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLF
+EVDNS + +QRTSVFDRIKP TTR SVFQR+SMA +EENQC ST R STF+RLS+ST +K + STS FDRLK+ +DQ +R+M LK K F
Subjt: ------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLF
Query: NEVSSDEKLQSIVASRMKRKFSVLINTEGSL
+E + D+K+ S V SRMKRK SV INTEGSL
Subjt: NEVSSDEKLQSIVASRMKRKFSVLINTEGSL
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| TYK00108.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.6e-30 | 45.21 | Show/hide |
Query: EEKDSQIAQLKSQIENQH----IAESSQTQRSKK-------------FSQPRQPVTAKELFSKTFHKKEKENF-------ATSYC------IDVEEVDNS
+E+ + Q KS +H I+ + +R+KK F QPRQ +T E F ++F + E TS+ EEVDNS
Subjt: EEKDSQIAQLKSQIENQH----IAESSQTQRSKK-------------FSQPRQPVTAKELFSKTFHKKEKENF-------ATSYC------IDVEEVDNS
Query: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
+ +QRTSVFDRIKP TTR SVFQR+SMA +E+NQC ST TR S F+RLS+ST +K + STS FDR+K+ +DQ +R+M +LK K F+E + D+K+ S
Subjt: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
Query: VASRMKRKFSVLINTEGSL
V SRMKRK V INTEGSL
Subjt: VASRMKRKFSVLINTEGSL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJ64 Retrotransposon gag protein | 1.3e-30 | 47.37 | Show/hide |
Query: QRSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTS
++ + F QPR+ +T E S+ F + E T+ ++V EEVDNS + +QRTSVFDRIK TTR SVFQR+SMA +EENQC T
Subjt: QRSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTS
Query: TRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSLKFLLSKLEGSYTTLLHCSFFNFE
TR S F+RLS+STL+K + STS FDRLK+ +DQ +RKM +LK K F+ + D+K+ S V SRMKRK SV IN E S FL L HC FF F+
Subjt: TRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSLKFLLSKLEGSYTTLLHCSFFNFE
Query: GSHVALLRC
L RC
Subjt: GSHVALLRC
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| A0A5A7TQ06 Retrotransposon gag protein | 2.7e-31 | 45.66 | Show/hide |
Query: EEKDSQIAQLKSQIENQH----IAESSQTQRSKKF-------------SQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----------EEVDNS
+E+ + Q KS +H I+ + +R+KK QPRQ +T E F ++F H +E T + + EEVDNS
Subjt: EEKDSQIAQLKSQIENQH----IAESSQTQRSKKF-------------SQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----------EEVDNS
Query: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
+ +QRTSVFDRIKP TTR SVFQR+SMA +EENQC ST R S F+RLS+ST +K + STS FDRLK+ +DQ +R+M +LK K F+E + D+K+ S
Subjt: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
Query: VASRMKRKFSVLINTEGSL
V SRMKRK SV INTEGSL
Subjt: VASRMKRKFSVLINTEGSL
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| A0A5A7VDY3 Ty3-gypsy retrotransposon protein | 2.3e-30 | 43.29 | Show/hide |
Query: VTVMMTETRTMEERMTEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIAESSQTQRSKKFSQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----
V MM T T + + + ++IN + ++ +L + I+ + + F QPRQ +T E ++F H KE + +
Subjt: VTVMMTETRTMEERMTEMQEHINTLMKAIEEKDSQIAQLKSQIENQHIAESSQTQRSKKFSQPRQPVTAKELFSKTF---HKKEKENFATSYCIDV----
Query: ------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLF
+EVDNS + +QRTSVFDRIKP TTR SVFQR+SMA +EENQC ST R STF+RLS+ST +K + STS FDRLK+ +DQ +R+M LK K F
Subjt: ------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLF
Query: NEVSSDEKLQSIVASRMKRKFSVLINTEGSL
+E + D+K+ S V SRMKRK SV INTEGSL
Subjt: NEVSSDEKLQSIVASRMKRKFSVLINTEGSL
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| A0A5D3BBF9 Gag protease polyprotein | 3.0e-30 | 50 | Show/hide |
Query: RSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTST
+ + F QPR+ +T E ++F + E T+ ++V EEVDNS + +QRTS+FDRIKP TTR VFQR+SMA +EENQC ST
Subjt: RSKKFSQPRQPVTAKELFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTST
Query: RPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSL
R S F+RLS+ST +K + STS FDRLK+ +DQ +R+M +LK K F+E + D+K+ S V SRMKRK SV INTEGSL
Subjt: RPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSIVASRMKRKFSVLINTEGSL
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| A0A5D3BLW3 Retrotransposon gag protein | 1.7e-30 | 45.21 | Show/hide |
Query: EEKDSQIAQLKSQIENQH----IAESSQTQRSKK-------------FSQPRQPVTAKELFSKTFHKKEKENF-------ATSYC------IDVEEVDNS
+E+ + Q KS +H I+ + +R+KK F QPRQ +T E F ++F + E TS+ EEVDNS
Subjt: EEKDSQIAQLKSQIENQH----IAESSQTQRSKK-------------FSQPRQPVTAKELFSKTFHKKEKENF-------ATSYC------IDVEEVDNS
Query: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
+ +QRTSVFDRIKP TTR SVFQR+SMA +E+NQC ST TR S F+RLS+ST +K + STS FDR+K+ +DQ +R+M +LK K F+E + D+K+ S
Subjt: KKGEQRTSVFDRIKPSTTRPSVFQRMSMAATKEENQCSVSTSTRPSTFQRLSVSTLRKSQSSTSVFDRLKVADDQPKRKMNNLKVKLFNEVSSDEKLQSI
Query: VASRMKRKFSVLINTEGSL
V SRMKRK V INTEGSL
Subjt: VASRMKRKFSVLINTEGSL
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