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Spg018281 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018281
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionYcf3-interacting protein 1, chloroplastic
Genome locationscaffold3:11883645..11890523
RNA-Seq ExpressionSpg018281
SyntenySpg018281
Gene Ontology termsGO:0048564 - photosystem I assembly (biological process)
GO:0080183 - response to photooxidative stress (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040340 - Chloroplast enhancing stress tolerance protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4359846.1 hypothetical protein G4B88_020367 [Cannabis sativa]1.9e-1842.22Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   + +G + +++   +  VNE         L+ +++++ +     VEA KKK S+SLYAKATDTG+DPREA +RLN++WDTAAEIED+D  ++ EV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        P  +VW+WSTV   +F   +   S  +  LQLS +
Subjt:  PTTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

RVW62053.1 Ycf3-interacting protein 1, chloroplastic [Vitis vinifera]3.8e-1944.52Show/hide
Query:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD
        QR     RL+     +  T +++   +  VNE         L+ +++++++     VEAPKKK S+SLYAKATDTGVDPREA KRLN+DWD+AAEIED D
Subjt:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD

Query:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        +SD+ EVP    +++  IWSTV    F  D+ ++ S +P LQ S+I
Subjt:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

RVW83588.1 Ycf3-interacting protein 1, chloroplastic [Vitis vinifera]2.9e-1944.52Show/hide
Query:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD
        QR     RL+     +  T +++   +  VNE         L+ +++++++     VEAPKKK S+SLYAKATDTGVDPREA KRLN+DWD+AAEIED D
Subjt:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD

Query:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        +SD+ EVP    +++  IWSTV    F  D+ ++ S +P LQ S+I
Subjt:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

XP_004134512.1 ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus]2.4e-1855.77Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   +++  T D++   +  VNE         LQ ++++++       EAPKKKRS+SLYAKATDTGV+PREA KRLNIDWDTAAEIEDADLSDDPEV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTV
        P  V
Subjt:  PTTV

XP_008439416.1 PREDICTED: ycf3-interacting protein 1, chloroplastic isoform X2 [Cucumis melo]4.1e-1854.29Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   +++  T D++   +  VNE         LQ +++++++      EAPKK+RS+SLYAKATDTGV+PREA KRLNIDWDTAAEIEDADL DDPEV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTVV
        P  VV
Subjt:  PTTVV

TrEMBL top hitse value%identityAlignment
A0A0A0KJ48 Uncharacterized protein1.2e-1855.77Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   +++  T D++   +  VNE         LQ ++++++       EAPKKKRS+SLYAKATDTGV+PREA KRLNIDWDTAAEIEDADLSDDPEV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTV
        P  V
Subjt:  PTTV

A0A1S3AYR1 ycf3-interacting protein 1, chloroplastic isoform X22.0e-1854.29Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   +++  T D++   +  VNE         LQ +++++++      EAPKK+RS+SLYAKATDTGV+PREA KRLNIDWDTAAEIEDADL DDPEV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTVV
        P  VV
Subjt:  PTTVV

A0A438FQ39 Ycf3-interacting protein 1, chloroplastic1.8e-1944.52Show/hide
Query:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD
        QR     RL+     +  T +++   +  VNE         L+ +++++++     VEAPKKK S+SLYAKATDTGVDPREA KRLN+DWD+AAEIED D
Subjt:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD

Query:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        +SD+ EVP    +++  IWSTV    F  D+ ++ S +P LQ S+I
Subjt:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

A0A438HGP5 Ycf3-interacting protein 1, chloroplastic1.4e-1944.52Show/hide
Query:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD
        QR     RL+     +  T +++   +  VNE         L+ +++++++     VEAPKKK S+SLYAKATDTGVDPREA KRLN+DWD+AAEIED D
Subjt:  QRIKNGDRLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDAD

Query:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        +SD+ EVP    +++  IWSTV    F  D+ ++ S +P LQ S+I
Subjt:  LSDDPEVP----TTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

A0A7J6ENH0 Uncharacterized protein9.0e-1942.22Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV
        RL+   + +G + +++   +  VNE         L+ +++++ +     VEA KKK S+SLYAKATDTG+DPREA +RLN++WDTAAEIED+D  ++ EV
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEV

Query:  PTTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI
        P  +VW+WSTV   +F   +   S  +  LQLS +
Subjt:  PTTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSI

SwissProt top hitse value%identityAlignment
B8AAV3 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic2.7e-1243.93Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKR--SESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDD-
        RL+     + IT D++   +  VNE         LQ ++K+++E     +EAPKKK    +S+YAKATDTG+DP  A KRLNIDWD+AA+++D +  DD 
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKR--SESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDD-

Query:  PEVPTTV
         EVP+ V
Subjt:  PEVPTTV

E5KCJ8 Ycf3-interacting protein 1, chloroplastic4.6e-1243.14Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKK-KRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPE
        RL+    E   T D++   +  +NE         LQ ++++++      VEA K+ K   SLYAKATDTG+DP+EA KRL IDWD+AAEI+++  SD+P+
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKK-KRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPE

Query:  VP
        VP
Subjt:  VP

Q5VQK9 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic2.7e-1243.93Show/hide
Query:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKR--SESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDD-
        RL+     + IT D++   +  VNE         LQ ++K+++E     +EAPKKK    +S+YAKATDTG+DP  A KRLNIDWD+AA+++D +  DD 
Subjt:  RLIKQSQEEGITNDEITWKISPVNE--------RLQAVSKQLSE----TVEAPKKKR--SESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDD-

Query:  PEVPTTV
         EVP+ V
Subjt:  PEVPTTV

Q9LU01 Ycf3-interacting protein 1, chloroplastic3.0e-1158.18Show/hide
Query:  VEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEVPTTV
        VE  KK+R +S+YAK+TDTG+DP+EA KRLN++WD+AA IE+ D+ D+  V T V
Subjt:  VEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEVPTTV

Arabidopsis top hitse value%identityAlignment
AT5G44650.1 Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.2.1e-1258.18Show/hide
Query:  VEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEVPTTV
        VE  KK+R +S+YAK+TDTG+DP+EA KRLN++WD+AA IE+ D+ D+  V T V
Subjt:  VEAPKKKRSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEVPTTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGACCAAATCATCAGGGAAGACTACAGAGGATGAAGATATGGAGAGAGAATGGGAAGGGAATAAAAGACCATGGGTGAGAGTGGCCAATACGCCGACTCAATA
TGCCTTCTTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTGGGAAAAGTAGATGAGTGTCTATTAGGTC
CTCCTGCTAGCTCCGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTCGATCCAAAATCAAGAAAGGTGTCCGTTGAAGAATTCAGAGTCGTCAGACGGAGGTCC
ATTAGGTCCCCTGCTAGCTCTGGCGACGATTCAGACTTCCACACCAAAAAGCTCACGACGATTTCTCTTGACCCTCGCAAGCAGAATGGAGGAGAAGAAAGGTCATCACA
GTACTGTAATTTATCATTAGCTCCGCCTTGGAACCAAGCTCTGCATCGTTCTCAGCTCTCTCTCTGTCAAAGAATTAAAAATGGCGATCGACTGATTAAGCAAAGTCAAG
AAGAGGGGATTACAAATGATGAGATCACATGGAAGATATCTCCAGTAAACGAAAGGCTTCAGGCTGTTTCGAAGCAATTGTCGGAAACTGTTGAGGCACCCAAGAAGAAA
CGCAGTGAATCTTTATATGCAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGGGAAAAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGCCGA
CTTGAGTGATGACCCGGAAGTGCCTACTACTGTGGTTTGGATATGGAGCACTGTACATTGTGACAACTTTCCCAATGATAATTGGCATCTCAGTAGTTCTAATCCTTTTC
TACAGCTCTCTTCAATAGTGTATGTGGCAGTAGACGTGGTTGATAATTGCCGCCTTTGCAGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGACCAAATCATCAGGGAAGACTACAGAGGATGAAGATATGGAGAGAGAATGGGAAGGGAATAAAAGACCATGGGTGAGAGTGGCCAATACGCCGACTCAATA
TGCCTTCTTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTGGGAAAAGTAGATGAGTGTCTATTAGGTC
CTCCTGCTAGCTCCGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTCGATCCAAAATCAAGAAAGGTGTCCGTTGAAGAATTCAGAGTCGTCAGACGGAGGTCC
ATTAGGTCCCCTGCTAGCTCTGGCGACGATTCAGACTTCCACACCAAAAAGCTCACGACGATTTCTCTTGACCCTCGCAAGCAGAATGGAGGAGAAGAAAGGTCATCACA
GTACTGTAATTTATCATTAGCTCCGCCTTGGAACCAAGCTCTGCATCGTTCTCAGCTCTCTCTCTGTCAAAGAATTAAAAATGGCGATCGACTGATTAAGCAAAGTCAAG
AAGAGGGGATTACAAATGATGAGATCACATGGAAGATATCTCCAGTAAACGAAAGGCTTCAGGCTGTTTCGAAGCAATTGTCGGAAACTGTTGAGGCACCCAAGAAGAAA
CGCAGTGAATCTTTATATGCAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGGGAAAAGACTAAACATTGATTGGGACACTGCAGCTGAGATCGAAGATGCCGA
CTTGAGTGATGACCCGGAAGTGCCTACTACTGTGGTTTGGATATGGAGCACTGTACATTGTGACAACTTTCCCAATGATAATTGGCATCTCAGTAGTTCTAATCCTTTTC
TACAGCTCTCTTCAATAGTGTATGTGGCAGTAGACGTGGTTGATAATTGCCGCCTTTGCAGTTTCTGA
Protein sequenceShow/hide protein sequence
MDKTKSSGKTTEDEDMEREWEGNKRPWVRVANTPTQYAFFFGDKTEWEAGDMTTQEGIHSFPLLGKVDECLLGPPASSGEDQLVVSQLLTLDPKSRKVSVEEFRVVRRRS
IRSPASSGDDSDFHTKKLTTISLDPRKQNGGEERSSQYCNLSLAPPWNQALHRSQLSLCQRIKNGDRLIKQSQEEGITNDEITWKISPVNERLQAVSKQLSETVEAPKKK
RSESLYAKATDTGVDPREAGKRLNIDWDTAAEIEDADLSDDPEVPTTVVWIWSTVHCDNFPNDNWHLSSSNPFLQLSSIVYVAVDVVDNCRLCSF