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Spg018285 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018285
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationscaffold3:10271265..10272898
RNA-Seq ExpressionSpg018285
SyntenySpg018285
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041553.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa]1.3e-2364.52Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

KAG7013413.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2262.37Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E YV VA+F  DF DL LE EAEKK A +LI+ +E+ R +  FWWE
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

XP_004147877.3 agamous-like MADS-box protein AGL62 [Cucumis sativus]3.7e-2363.44Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  +F FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

XP_008466532.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]1.3e-2364.52Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

XP_038875004.1 agamous-like MADS-box protein AGL62 [Benincasa hispida]1.6e-2363.44Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELSILCG EVAIIV SPN  VF FGH D + LLD +L++NLS  KP E Y+ V +F  DF D+ALE E EKK AT LI  AED RKN RFWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

TrEMBL top hitse value%identityAlignment
A0A0A0LE01 MADS-box domain-containing protein1.8e-2363.44Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  +F FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

A0A1S3CRI8 agamous-like MADS-box protein AGL626.1e-2464.52Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

A0A5D3D807 Agamous-like MADS-box protein AGL626.1e-2464.52Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E Y+ VA+F  DF D ALE EAEKK A +LI  AED RKN  FWW+
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

A0A6J1H4M6 agamous-like MADS-box protein AGL621.5e-2262.37Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH D D LLD +L+ NLS  KP E YV VA+F  DF DL LE EAEKK A +LI+ +E+ R +  FWWE
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

A0A6J1KVC9 agamous-like MADS-box protein AGL625.7e-2261.29Show/hide
Query:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE
        ELS+LCGAEVAIIV SPN  VF FGH + D LLD +L+ NLS  KP E YV VA+F  DF DL LE EAEKK A +LI+ +E+ R +  FWWE
Subjt:  ELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE

SwissProt top hitse value%identityAlignment
O80807 Agamous-like MADS-box protein AGL231.3e-0757.45Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF
        KR+AGLF    E   LC A++A+IV SP  KVFS GH + D+LLDHF
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF

Q4PSU4 Agamous-like MADS-box protein AGL612.9e-0736.78Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI-ENLSMSKPGE---KYVSMLKFNCDFATLVMKLEAQKK
        KRRAGLF    EL  LCGAE+ IIV SP  K FS GH   + +LD ++   N+S+++  +      +  + N     ++ ++E +KK
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI-ENLSMSKPGE---KYVSMLKFNCDFATLVMKLEAQKK

Q9FKK2 Agamous-like MADS-box protein AGL621.6e-0856.86Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLIEN
        KRR+GLF    EL  LCGAEVAI+V SP  KVFS GH + D ++D F+  N
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLIEN

Q9LMM8 Agamous-like MADS-box protein AGL287.7e-0852.46Show/hide
Query:  RMWNSSPPKVI--KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFL
        +M N S  +V   KRR+GLF  G EL  LC AE+AIIV SP+ K +S GH + + LLDH L
Subjt:  RMWNSSPPKVI--KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFL

Q9XJ60 MADS-box transcription factor 508.0e-0534.65Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI---ENLSMSKPGEKYVSMLKFNCDFATLVMKLEAQKKLATKLLKTNCVELS
        KRR GL     ELS+LC AEVA+IV SP  K++    +     ++ +     EN+  +K  ++ +  +K + D   L  KLEA +    KLL     E S
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI---ENLSMSKPGEKYVSMLKFNCDFATLVMKLEAQKKLATKLLKTNCVELS

Query:  I
        I
Subjt:  I

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 285.5e-0952.46Show/hide
Query:  RMWNSSPPKVI--KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFL
        +M N S  +V   KRR+GLF  G EL  LC AE+AIIV SP+ K +S GH + + LLDH L
Subjt:  RMWNSSPPKVI--KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFL

AT1G65360.1 AGAMOUS-like 239.3e-0957.45Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF
        KR+AGLF    E   LC A++A+IV SP  KVFS GH + D+LLDHF
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF

AT2G24840.1 AGAMOUS-like 612.1e-0836.78Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI-ENLSMSKPGE---KYVSMLKFNCDFATLVMKLEAQKK
        KRRAGLF    EL  LCGAE+ IIV SP  K FS GH   + +LD ++   N+S+++  +      +  + N     ++ ++E +KK
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLI-ENLSMSKPGE---KYVSMLKFNCDFATLVMKLEAQKK

AT3G66656.1 AGAMOUS-like 917.4e-0646.81Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF
        KRR GLF    EL+ LC AEV I+V SP +K +S G  + D++ + F
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHF

AT5G60440.1 AGAMOUS-like 621.1e-0956.86Show/hide
Query:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLIEN
        KRR+GLF    EL  LCGAEVAI+V SP  KVFS GH + D ++D F+  N
Subjt:  KRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLIEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGAGAAGGATCTCTTCCCGAATGTGGAATTCTTCCCCCCCAAAAGTTATCAAACGCCGAGCTGGACTTTTCAATAATGGTGTTGAGCTCTCTATTTTGTGCGG
AGCAGAGGTTGCCATCATCGTCTTGTCTCCCAACGATAAGGTGTTTTCCATTGGTCATTCTGACGACGATCTGCTTCTAGATCACTTCCTCATTGAAAATTTGTCGATGT
CGAAGCCGGGTGAGAAATACGTCTCTATGTTGAAGTTTAACTGTGATTTTGCCACTTTAGTGATGAAACTGGAAGCACAAAAGAAGCTAGCGACGAAGTTATTAAAGACG
AATTGTGTCGAGCTCTCTATTTTATGCGGAGCAGAGGTTGCCATCATCGTCTTGTCTCCCAATGGTAATGTGTTTTCCTTTGGTCATTCTGACGACGATCGGCTTCTGGA
TCACTTCCTCTCTGAAAATTTGTCGATGTCGAAGCCGGGTGAGAGATATGTCTCTGTGGCGAAGTTTACCTGCGATTTTGTCGATTTAGCGTTGGAACTTGAAGCAGAGA
AGAAGATAGCGACGAAGTTGATAGAGACGGCAGAGGATTTCAGAAAGAACGACAGATTCTGGTGGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGAGAAGGATCTCTTCCCGAATGTGGAATTCTTCCCCCCCAAAAGTTATCAAACGCCGAGCTGGACTTTTCAATAATGGTGTTGAGCTCTCTATTTTGTGCGG
AGCAGAGGTTGCCATCATCGTCTTGTCTCCCAACGATAAGGTGTTTTCCATTGGTCATTCTGACGACGATCTGCTTCTAGATCACTTCCTCATTGAAAATTTGTCGATGT
CGAAGCCGGGTGAGAAATACGTCTCTATGTTGAAGTTTAACTGTGATTTTGCCACTTTAGTGATGAAACTGGAAGCACAAAAGAAGCTAGCGACGAAGTTATTAAAGACG
AATTGTGTCGAGCTCTCTATTTTATGCGGAGCAGAGGTTGCCATCATCGTCTTGTCTCCCAATGGTAATGTGTTTTCCTTTGGTCATTCTGACGACGATCGGCTTCTGGA
TCACTTCCTCTCTGAAAATTTGTCGATGTCGAAGCCGGGTGAGAGATATGTCTCTGTGGCGAAGTTTACCTGCGATTTTGTCGATTTAGCGTTGGAACTTGAAGCAGAGA
AGAAGATAGCGACGAAGTTGATAGAGACGGCAGAGGATTTCAGAAAGAACGACAGATTCTGGTGGGAGTAA
Protein sequenceShow/hide protein sequence
MELRRISSRMWNSSPPKVIKRRAGLFNNGVELSILCGAEVAIIVLSPNDKVFSIGHSDDDLLLDHFLIENLSMSKPGEKYVSMLKFNCDFATLVMKLEAQKKLATKLLKT
NCVELSILCGAEVAIIVLSPNGNVFSFGHSDDDRLLDHFLSENLSMSKPGERYVSVAKFTCDFVDLALELEAEKKIATKLIETAEDFRKNDRFWWE