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Spg018291 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018291
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold3:8449959..8452977
RNA-Seq ExpressionSpg018291
SyntenySpg018291
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-1246.08Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARLQRT
        A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L + G ID   +AR+  T
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARLQRT

Query:  QE
        QE
Subjt:  QE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.1e-1934.42Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---
        A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L + G ID   +AR+   
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---

Query:  ---QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP
           + TQ+            R  G +    + LEQ       Q+Y          +Q Q +W Y+K RD      LQ+NF++P   FP FP ++      
Subjt:  ---QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP

Query:  PPPVQREEEEEDEQD
           +  E E E ++D
Subjt:  PPPVQREEEEEDEQD

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.4e-1933.95Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIID----------
        A  W  F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L   G ID          
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIID----------

Query:  -------KPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP
               +P+ +R      +R  G +    + LEQ       Q+Y          +Q Q +W Y+K RD      LQ+NF++P   FP FP +L      
Subjt:  -------KPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP

Query:  PPPVQREEEEEDEQD
           +  E E E ++D
Subjt:  PPPVQREEEEEDEQD

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.8e-2035.29Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---
        A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A      E +H  + G ID   +AR+   
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---

Query:  -----------QRTQEARQGGLVCGIHQILEQLALSASRQEYVERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIPPPPVQREEEEE
                    R   A        + Q L+ L    S+QE+  +Q Q +W Y+K RD      LQ+NF++P   FP FP ++         +  E E E
Subjt:  -----------QRTQEARQGGLVCGIHQILEQLALSASRQEYVERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIPPPPVQREEEEE

Query:  DEQD
         ++D
Subjt:  DEQD

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.8e-1132.53Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLL---DKGIIDKPNLARL
        AN W+ FI+  L PTTHDS++S ++++L++ ++   +I+VGK++   I  C +++  KLFFP+ I  L  +AGVP   +D+ +    +K  ID   +++L
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLL---DKGIIDKPNLARL

Query:  -QRTQEARQ-GGLVCGIHQILEQLA-----LSASRQEYVER----QAQ-TYWTYAKRRDLQSNFSK
         +R++  R+  G+   + ++LEQ       L   R E VE+    QA  T    A  R ++  F K
Subjt:  -QRTQEARQ-GGLVCGIHQILEQLA-----LSASRQEYVER----QAQ-TYWTYAKRRDLQSNFSK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1246.08Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARLQRT
        A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L + G ID   +AR+  T
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARLQRT

Query:  QE
        QE
Subjt:  QE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-1934.42Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---
        A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L + G ID   +AR+   
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---

Query:  ---QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP
           + TQ+            R  G +    + LEQ       Q+Y          +Q Q +W Y+K RD      LQ+NF++P   FP FP ++      
Subjt:  ---QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP

Query:  PPPVQREEEEEDEQD
           +  E E E ++D
Subjt:  PPPVQREEEEEDEQD

A0A2P5CEY2 Uncharacterized protein6.8e-2033.95Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIID----------
        A  W  F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A  P    +  L   G ID          
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIID----------

Query:  -------KPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP
               +P+ +R      +R  G +    + LEQ       Q+Y          +Q Q +W Y+K RD      LQ+NF++P   FP FP +L      
Subjt:  -------KPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEY--------VERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIP

Query:  PPPVQREEEEEDEQD
           +  E E E ++D
Subjt:  PPPVQREEEEEDEQD

A0A2P5DXM3 Uncharacterized protein2.3e-2035.29Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---
        A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K   LFFP+ IT LC  A      E +H  + G ID   +AR+   
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARL---

Query:  -----------QRTQEARQGGLVCGIHQILEQLALSASRQEYVERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIPPPPVQREEEEE
                    R   A        + Q L+ L    S+QE+  +Q Q +W Y+K RD      LQ+NF++P   FP FP ++         +  E E E
Subjt:  -----------QRTQEARQGGLVCGIHQILEQLALSASRQEYVERQAQTYWTYAKRRD------LQSNFSKPYQVFPVFPNDLFNPWIPPPPVQREEEEE

Query:  DEQD
         ++D
Subjt:  DEQD

A0A5D2MA47 Uncharacterized protein1.5e-1148.68Show/hide
Query:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPT
        AN W  F++   +P +H  T+S +R+LL++AIL   SI+VGKIIL EI+NC +KK   ++FP+ IT LC +A V T
Subjt:  ANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGGAAGAAGAAGTGCCGATTACACATGAGGCACCGAAGACAAAGACAAAGAAAAGGAAAACGCCAGAAGAAAGAGAGGCTAAGAGACGAAGAAGAAAATAGCGG
GCTGAGGTTGAAGAGGTTTGAACCAATAGTGGAAAATCCGCAAGAAGTGCAAGAGAAGCAAGCGGAAGATGTGCAAGAAGAAGGAAATGGTCAGGGAGCTCAAGAGCAAC
AAATTCAGGCTGAAGACGTTGTACTAGAGATTCCACGTCGTCACCGCCGAAAGCAGAAGGCTGGACGAATCAAGGCAAAGGAAGAACTTTTGACGAAGCATCAAGACGAC
AAGGGCAAGGGAATTGCCGAAGCAATGGATGAAGCAGAAGAGGAAGAAGCAGGAATGTCGTTTATTCGCTTCGTCAATGAACTTGCCAGAGCAAAGTACAGGGAGATGCT
GAAAAGGGATTTCTTCCTAGGAGCAATCAATTCTCTCTTCAACCTCCAAGATTTTTCGCATGCTGGGTTTAATGAGATGGTGGTGGCACCATCTAACGACCAATTGAATG
CGGCTGTCAGGGAGAGTGAGGCTAACACATGGTTGGGCTTCATCAAACTGCGCTTGCTTCCGACAACCCACGACTCGACAGTATCCCGGGACAGAGTGCTTCTTGTATTT
GCTATCCTACGTTCTTTGAGTATCGATGTTGGAAAAATTATTTTGAGTGAAATTTATAATTGCTGGCGCAAGAAGGTGGAGAAGCTGTTTTTCCCAAATACAATTACAAT
GTTATGCAGCAGGGCAGGAGTGCCCACGACTCCAGAGGATGTTCATCTACTTGACAAAGGGATAATAGACAAGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCAC
GCCAAGGTGGGCTGGTGTGCGGCATCCACCAGATTTTAGAGCAGCTGGCACTGTCGGCCAGTAGGCAAGAGTATGTTGAAAGGCAAGCTCAAACCTACTGGACCTATGCG
AAGAGGAGGGATTTGCAATCCAATTTTTCAAAACCATATCAGGTCTTCCCTGTTTTCCCCAATGACCTGTTTAATCCTTGGATTCCACCGCCGCCAGTACAGAGAGAGGA
AGAGGAGGAAGACGAGCAGGATTTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGAGTTAGGTTGTGGCAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTT
GTCCGTACTGGAAGAATTATTTTGCTGCAGCAGTGGGTGGTTTTGCAGAATGCTCAGAATATAATGCTGAGCGACTTAAGGGAGCAAAATCTGTGATCCAGCAAAGCAGG
GAGCAAAACTGCCACGCAAGCAGTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGGAAGAAGAAGTGCCGATTACACATGAGGCACCGAAGACAAAGACAAAGAAAAGGAAAACGCCAGAAGAAAGAGAGGCTAAGAGACGAAGAAGAAAATAGCGG
GCTGAGGTTGAAGAGGTTTGAACCAATAGTGGAAAATCCGCAAGAAGTGCAAGAGAAGCAAGCGGAAGATGTGCAAGAAGAAGGAAATGGTCAGGGAGCTCAAGAGCAAC
AAATTCAGGCTGAAGACGTTGTACTAGAGATTCCACGTCGTCACCGCCGAAAGCAGAAGGCTGGACGAATCAAGGCAAAGGAAGAACTTTTGACGAAGCATCAAGACGAC
AAGGGCAAGGGAATTGCCGAAGCAATGGATGAAGCAGAAGAGGAAGAAGCAGGAATGTCGTTTATTCGCTTCGTCAATGAACTTGCCAGAGCAAAGTACAGGGAGATGCT
GAAAAGGGATTTCTTCCTAGGAGCAATCAATTCTCTCTTCAACCTCCAAGATTTTTCGCATGCTGGGTTTAATGAGATGGTGGTGGCACCATCTAACGACCAATTGAATG
CGGCTGTCAGGGAGAGTGAGGCTAACACATGGTTGGGCTTCATCAAACTGCGCTTGCTTCCGACAACCCACGACTCGACAGTATCCCGGGACAGAGTGCTTCTTGTATTT
GCTATCCTACGTTCTTTGAGTATCGATGTTGGAAAAATTATTTTGAGTGAAATTTATAATTGCTGGCGCAAGAAGGTGGAGAAGCTGTTTTTCCCAAATACAATTACAAT
GTTATGCAGCAGGGCAGGAGTGCCCACGACTCCAGAGGATGTTCATCTACTTGACAAAGGGATAATAGACAAGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCAC
GCCAAGGTGGGCTGGTGTGCGGCATCCACCAGATTTTAGAGCAGCTGGCACTGTCGGCCAGTAGGCAAGAGTATGTTGAAAGGCAAGCTCAAACCTACTGGACCTATGCG
AAGAGGAGGGATTTGCAATCCAATTTTTCAAAACCATATCAGGTCTTCCCTGTTTTCCCCAATGACCTGTTTAATCCTTGGATTCCACCGCCGCCAGTACAGAGAGAGGA
AGAGGAGGAAGACGAGCAGGATTTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGAGTTAGGTTGTGGCAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTT
GTCCGTACTGGAAGAATTATTTTGCTGCAGCAGTGGGTGGTTTTGCAGAATGCTCAGAATATAATGCTGAGCGACTTAAGGGAGCAAAATCTGTGATCCAGCAAAGCAGG
GAGCAAAACTGCCACGCAAGCAGTTCGTAA
Protein sequenceShow/hide protein sequence
MLRKKKCRLHMRHRRQRQRKGKRQKKERLRDEEENSGLRLKRFEPIVENPQEVQEKQAEDVQEEGNGQGAQEQQIQAEDVVLEIPRRHRRKQKAGRIKAKEELLTKHQDD
KGKGIAEAMDEAEEEEAGMSFIRFVNELARAKYREMLKRDFFLGAINSLFNLQDFSHAGFNEMVVAPSNDQLNAAVRESEANTWLGFIKLRLLPTTHDSTVSRDRVLLVF
AILRSLSIDVGKIILSEIYNCWRKKVEKLFFPNTITMLCSRAGVPTTPEDVHLLDKGIIDKPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEYVERQAQTYWTYA
KRRDLQSNFSKPYQVFPVFPNDLFNPWIPPPPVQREEEEEDEQDFLKLGLVSLIRSRVRLWQVLRIELKVVIICPYWKNYFAAAVGGFAECSEYNAERLKGAKSVIQQSR
EQNCHASSS