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Spg018308 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018308
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:8745108..8748069
RNA-Seq ExpressionSpg018308
SyntenySpg018308
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]1.9e-0435.82Show/hide
Query:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV
        I +P ++Q+ +AL ++    ++W  S+  +  L S  L LE  +W+Y++K R+I TTHD T+S++ V
Subjt:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]5.5e-0435.82Show/hide
Query:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV
        I +P +  + + L ++     QW  S+  IK L S  L  EA +W+Y++K R+IPT+H+ T+S  C+
Subjt:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.0e-0541.79Show/hide
Query:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV
        I +P +E++ +AL  +     QW  S+  IK L S  L  EA +W+Y++K RIIPT+HD T+S++ V
Subjt:  IKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATAAAAGAGCCCATTGACGAACAGTTAGCTGAGGCCCTATCTTTAGTGGCTCATGACGACATACAGTGGAAAGAGTCCATGACGAGGATCAAACCTCTATTATC
TGGAGATTTGAAGTTAGAGGCAGCAGTCTGGCTATATGTGATCAAGAACAGGATCATACCGACGACACATGACACCACCATCTCACAAGAGTGTGTGACCACTCCTGAGA
AGAAGGCACAGCAGACTCCTCCCCAAGCTTTAGTACCTCTAGAGCCTTCCACAACAGCAGATGCGACCGCAACTCCAACGCCAATCCCAGCCTCCCAGCCACAACCTGAA
GATAACTTAGTGAAGTTGAGGCGAGATTTGGAGTATTTGAGGGACCAGTGCAGATTCTACATCCCATATGCCCTGTTTCGGGATCGTGTTCTACGTAAGATTTGTGATGA
GTTGGTGGAGAACATTGATGATTATCTCCCTCCATTCCCGACATCAGTAGGTAGTGGCCAAGTCGTTGATAACGCTCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATAAAAGAGCCCATTGACGAACAGTTAGCTGAGGCCCTATCTTTAGTGGCTCATGACGACATACAGTGGAAAGAGTCCATGACGAGGATCAAACCTCTATTATC
TGGAGATTTGAAGTTAGAGGCAGCAGTCTGGCTATATGTGATCAAGAACAGGATCATACCGACGACACATGACACCACCATCTCACAAGAGTGTGTGACCACTCCTGAGA
AGAAGGCACAGCAGACTCCTCCCCAAGCTTTAGTACCTCTAGAGCCTTCCACAACAGCAGATGCGACCGCAACTCCAACGCCAATCCCAGCCTCCCAGCCACAACCTGAA
GATAACTTAGTGAAGTTGAGGCGAGATTTGGAGTATTTGAGGGACCAGTGCAGATTCTACATCCCATATGCCCTGTTTCGGGATCGTGTTCTACGTAAGATTTGTGATGA
GTTGGTGGAGAACATTGATGATTATCTCCCTCCATTCCCGACATCAGTAGGTAGTGGCCAAGTCGTTGATAACGCTCATTTATAG
Protein sequenceShow/hide protein sequence
MAIKEPIDEQLAEALSLVAHDDIQWKESMTRIKPLLSGDLKLEAAVWLYVIKNRIIPTTHDTTISQECVTTPEKKAQQTPPQALVPLEPSTTADATATPTPIPASQPQPE
DNLVKLRRDLEYLRDQCRFYIPYALFRDRVLRKICDELVENIDDYLPPFPTSVGSGQVVDNAHL