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Spg018315 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018315
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:8759651..8762461
RNA-Seq ExpressionSpg018315
SyntenySpg018315
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0446.99Show/hide
Query:  AVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPA-FPSLQ-ASKPRVTYGTGSPGKP
        A+MA   A+++L L+ SN   ASLS SN GN+T  A A S WCD  TEECL G+DD D + F SL      R++  TG+  +P
Subjt:  AVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPA-FPSLQ-ASKPRVTYGTGSPGKP

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2154.4Show/hide
Query:  MGRPSRTGAVM----ATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPAFPSLQASKPR-VTYGTGSPGKPACGRPN
        MG  S +GAVM    A AM V ILMLSGS+C VAS +PS+ GN TV AAAAS+WCDG  EEC+  EDDG+ AFPSL AS P+ +++ T +  KP C RP 
Subjt:  MGRPSRTGAVM----ATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPAFPSLQASKPR-VTYGTGSPGKPACGRPN

Query:  GERYYGCTGKPRPIPKPQNCGTYTR
           Y  C    R   K  NCGTY R
Subjt:  GERYYGCTGKPRPIPKPQNCGTYTR

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1850.82Show/hide
Query:  MGRPSRTGAVM-ATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPAFPSLQAS-KPRVTYGTGSPGKPACGRPNGER
        MG  S +G VM A AM V IL+LSGS+C VAS +PS+ GN TV AAAAS+WCDG  EEC+  E D   AFPSLQ S +  ++  + +  K  C RP  + 
Subjt:  MGRPSRTGAVM-ATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPAFPSLQAS-KPRVTYGTGSPGKPACGRPNGER

Query:  YYGCTGKPRPIPKPQNCGTYTR
        Y  C    R  P P NCG YTR
Subjt:  YYGCTGKPRPIPKPQNCGTYTR

KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]2.2e-0637.9Show/hide
Query:  MGRPSRTGAVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGD---PAFPSLQASKPRVTYGTGSPGKPACGRPNGE
        M  P+ T  ++A A+ V++  +  S+CK ASL+ SN+GN+T  AA +S WC+   +ECL G +D +    AFPSL       T  T +  K  CGR    
Subjt:  MGRPSRTGAVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGD---PAFPSLQASKPRVTYGTGSPGKPACGRPNGE

Query:  RYYGCTGKPRPIPKPQNCGTYTRN
            C  + RP P  Q C T+TR+
Subjt:  RYYGCTGKPRPIPKPQNCGTYTRN

TrEMBL top hitse value%identityAlignment
A0A0A0LA12 Uncharacterized protein1.0e-0637.9Show/hide
Query:  MGRPSRTGAVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGD---PAFPSLQASKPRVTYGTGSPGKPACGRPNGE
        M  P+ T  ++A A+ V++  +  S+CK ASL+ SN+GN+T  AA +S WC+   +ECL G +D +    AFPSL       T  T +  K  CGR    
Subjt:  MGRPSRTGAVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGD---PAFPSLQASKPRVTYGTGSPGKPACGRPNGE

Query:  RYYGCTGKPRPIPKPQNCGTYTRN
            C  + RP P  Q C T+TR+
Subjt:  RYYGCTGKPRPIPKPQNCGTYTRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGTCCTTCCAGAACCGGAGCTGTAATGGCAACGGCAATGGCAGTCCTGATATTGATGCTGAGTGGAAGCAATTGTAAGGTTGCTTCTCTAAGTCCTTCCAATGT
CGGCAACCAGACCGTCGCCGCCGCTGCGGCATCGCTGTGGTGCGATGGCGGCACAGAAGAATGTCTCGACGGAGAAGACGACGGTGATCCGGCATTTCCAAGCTTGCAAG
CCAGTAAACCTAGGGTTACTTACGGGACGGGAAGCCCGGGAAAACCTGCATGTGGTCGGCCGAATGGAGAAAGATATTATGGCTGTACCGGAAAACCACGCCCAATTCCC
AAGCCCCAAAATTGTGGCACATATACTCGCAACGGCTGTAATGATCTGGGCTCTCGGCGAATCGTCGTCTTCTTCATAAATCGTTCTTCTTCTCCCCGATCTGCACTGCT
TGAACGAGGGGGAAATCGTGGGTCTTGGGTCGTGCAATCGTTGTCTTCTTCAGAAATCGTTCTTCTTCTCCCCGATCTGCAATGCCCGAACGAAGGGGAAAATCGTGGGT
GGTGGGTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGTCCTTCCAGAACCGGAGCTGTAATGGCAACGGCAATGGCAGTCCTGATATTGATGCTGAGTGGAAGCAATTGTAAGGTTGCTTCTCTAAGTCCTTCCAATGT
CGGCAACCAGACCGTCGCCGCCGCTGCGGCATCGCTGTGGTGCGATGGCGGCACAGAAGAATGTCTCGACGGAGAAGACGACGGTGATCCGGCATTTCCAAGCTTGCAAG
CCAGTAAACCTAGGGTTACTTACGGGACGGGAAGCCCGGGAAAACCTGCATGTGGTCGGCCGAATGGAGAAAGATATTATGGCTGTACCGGAAAACCACGCCCAATTCCC
AAGCCCCAAAATTGTGGCACATATACTCGCAACGGCTGTAATGATCTGGGCTCTCGGCGAATCGTCGTCTTCTTCATAAATCGTTCTTCTTCTCCCCGATCTGCACTGCT
TGAACGAGGGGGAAATCGTGGGTCTTGGGTCGTGCAATCGTTGTCTTCTTCAGAAATCGTTCTTCTTCTCCCCGATCTGCAATGCCCGAACGAAGGGGAAAATCGTGGGT
GGTGGGTGAAGTGA
Protein sequenceShow/hide protein sequence
MGRPSRTGAVMATAMAVLILMLSGSNCKVASLSPSNVGNQTVAAAAASLWCDGGTEECLDGEDDGDPAFPSLQASKPRVTYGTGSPGKPACGRPNGERYYGCTGKPRPIP
KPQNCGTYTRNGCNDLGSRRIVVFFINRSSSPRSALLERGGNRGSWVVQSLSSSEIVLLLPDLQCPNEGENRGWWVK