; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018316 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018316
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold3:10615223..10621087
RNA-Seq ExpressionSpg018316
SyntenySpg018316
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR025558 - Domain of unknown function DUF4283
IPR036397 - Ribonuclease H superfamily
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]4.1e-5142.11Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGG
        E K +     + KR+L+F+  ++V   GKSGGLML W ++ +V I+S S GHID+II   +G W+F+GFYGNP T KR  SW L+E+L    D+PWIIGG
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGG

Query:  DFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDD
        DFNEI+S  EK GG  RN SQM+        C +           W R           LDR+LIN +M  + +N KVTHL  LSSDH+PI+A+WDF   
Subjt:  DFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDD

Query:  AQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND
             +  + +RFEE WL+    +DI+  +W        +    K+ + L  L++WN+ RL  SLK AI  KE+E+ RL   D D
Subjt:  AQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND

XP_030929385.1 uncharacterized protein LOC115955407 [Quercus lobata]1.2e-4731.07Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG
        E K   +  ++ K  + F  GL +P  G+SGGL L W+ EI+V ++S+S+ HIDAI+ ++ GF W+ +GFYGNP+  +R  SW L++ L     +PW+  
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG

Query:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLD
        G+FNEI+S  EK GGARR+  QM  FRE I+ C+ MD G+ G +FTW   +  R ++   LDR L+    A    + +V HL    SDH  ++ T   + 
Subjt:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLD

Query:  DAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEKE
         +   R      +FE  W +  E +DI++  W    N     G+   +K    +L +WN G + G + + I+ K   +  L    +D  N  EI +  KE
Subjt:  DAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEKE

Query:  LDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---DQ
        +++LL  +E                              ++ T+     E G+W E   +I  +A  YF+ L+++S PD   + +VV+ +  K+S   +Q
Subjt:  LDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---DQ

Query:  QRVKELIKSNGE
          +K+  +   E
Subjt:  QRVKELIKSNGE

XP_030929385.1 uncharacterized protein LOC115955407 [Quercus lobata]3.2e-0347.17Show/hide
Query:  WDTTRIKREFLPLDEEDILAIPLSQTAGKDEIIWDTDSKGIFSVKSAYQLAVN
        W    +K  FLP + + IL IP+S    KD++IW  + KG+FSVKSAY +A+N
Subjt:  WDTTRIKREFLPLDEEDILAIPLSQTAGKDEIIWDTDSKGIFSVKSAYQLAVN

XP_030939647.1 uncharacterized protein LOC115964488 [Quercus lobata]5.6e-4832.14Show/hide
Query:  IKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHG--FWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGGDFNEIISEE
        IKR L  + GL VP   + GGL L WK+   V +++YS  HIDAI+ +  G   W+F+GFYGN ET+KR  SW L+E+L ++ D+PW+  GDFNEI+   
Subjt:  IKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHG--FWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGGDFNEIISEE

Query:  EKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDDAQKVRNHGK
        EK+GG+ R   QM++F ET+++C L D GYSG  FTW R    R  + E LDR  ++          ++ H++  +SDH  +V   D  +  ++     K
Subjt:  EKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDDAQKVRNHGK

Query:  LLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTK-VKNSLLNLHKWNR------GRLKGSLKKAIERKEEEILRLTNEDNDLNFEEILEAEKELDNLL
        L RFE  WL+     +IV  +W +     ++   +K ++    +L  WN+      GR   SL++ I+  EE+        N+   E+I + + EL+ ++
Subjt:  LLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTK-VKNSLLNLHKWNR------GRLKGSLKKAIERKEEEILRLTNEDNDLNFEEILEAEKELDNLL

Query:  RLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKISDQ
        R +E                             N+  T+      +GVW++++ +IG++  EYF+ LF SS+P   +  +++D +  K+ D+
Subjt:  RLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKISDQ

XP_030958760.1 uncharacterized protein LOC115980671 [Quercus lobata]2.4e-5132.93Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG
        E K   R  ++ K  + F  GL +P  G+SGGL L W+ EI+V ++S+S+ HIDAI+ ++ GF W+ +GFYGNPE  +R  SW L++ L     +PW+  
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG

Query:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF-L
        GDFNEI+S  EK GGARR+  QM  FRE ID C+ MD G+ G +FTW   +  R ++   LDR L+    A    + +V HL    SDH  ++ T    L
Subjt:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF-L

Query:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEK
           +K R H     FE  W +  E +DI++ +W    N     G+   +K    +L +WN G++ G + + I+ K   +  L   D+D  N  EI +  K
Subjt:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEK

Query:  ELDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---D
        E+++LL  +E                              ++ T+     E G+W E   +I  +A  YF+ L+++S PD   + +VV+ +  K+S   +
Subjt:  ELDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---D

Query:  QQRVKELIKSNGE
        Q  +K+  +   E
Subjt:  QQRVKELIKSNGE

XP_030970961.1 uncharacterized protein LOC115991405 [Quercus lobata]5.4e-5132.93Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG
        E K   R  ++ K  + F  GL +P  G+SGGL L W+ EI+V ++S+S+ HIDAI+ ++ GF W+ +GFYGNPE  +R  SW L++ L     +PW+  
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGF-WKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIG

Query:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF-L
        GDFNEI+S  EK GGARR+  QM  FRE ID C+ MD G+ G +FTW   +  R ++   LDR L+    A    + +V HL    SDH  ++ T    L
Subjt:  GDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF-L

Query:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEK
           +K R H     FE  W +  E +DI++ +W    N     G+   +K    +L +WN G++ G + + I+ K   +  L   D+D  N  EI +  K
Subjt:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQ-NDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND-LNFEEILEAEK

Query:  ELDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---D
        E+++LL  +E                              ++ T+     E G+W E   +I  +A  YF+ L+++S PD   + +VV+ +  K+S   +
Subjt:  ELDNLLRLKE-----------------------------NEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS---D

Query:  QQRVKELIKSNGE
        Q  +K+  +   E
Subjt:  QQRVKELIKSNGE

TrEMBL top hitse value%identityAlignment
A0A2N9IPS8 Reverse transcriptase domain-containing protein8.7e-4731.67Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAII---KKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWI
        E + D    ++++  + F+    VP +G  GGL + W A++DV + +YS  HIDA I   +K  GF + +GFYGNPET KR  SW L++ L      PW+
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAII---KKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWI

Query:  IGGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF
          GDFNEI+   E+ G   R   Q++ FRE +  C L D GY GN +TWRR ++    +   LDR + + +         V+HL+  +SDH PI+     
Subjt:  IGGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDF

Query:  LDDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQG-----LNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDNDLNFEEIL
        + D   V+   KL RFE  W+K ++ ++++  +W    D   +G     +  K+K    +L  W+R R  GSL  +I+RK E++  L NE        IL
Subjt:  LDDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQG-----LNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDNDLNFEEIL

Query:  EAEKELDNLLR--------------LKENEETT---------------LKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS
        E + +L+ LL               + E ++ T               + G     GVW+ ++ KI  IA +YFQ +F SS P  E++  V+  + + ++
Subjt:  EAEKELDNLLR--------------LKENEETT---------------LKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKIS

Query:  D
        +
Subjt:  D

A0A5B6U6G4 Reverse transcriptase1.3e-4532.24Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII
        E K D++  D+++R   F  G+NV  +G  GGL L W+ +I V +RSYS+ HID +IK+      W+F+GFYG+P    + + WNL+E+L ++ D PW++
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII

Query:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL
         GDFNEI+   EK+GG  R+P +M+ FR+T+  C LMD G+SG  FTW RG      I E LDR + N          ++ HL ++ SDH P++ T D  
Subjt:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL

Query:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNR--GRLKGSLKKAIERKEEEILRLTNEDN------DLNFEE
         D   +RN  +   FE  W   +  + ++++ W    +S ++ L  K+K   + L +W +   R KG LKK +    E +L    +D       D     
Subjt:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNR--GRLKGSLKKAIERKEEEILRLTNEDN------DLNFEE

Query:  ILEAEKEL---------------DNLLRLKENEETTLK------GFFSEHGVWEEDEGKIGAIATEYFQDLFQS-SEPDGENVRKVVD-CVSTKISD
         LE +KE                D          TT K          + G+   DE  +   A  YF++LF S    D + V + ++ C+S +++D
Subjt:  ILEAEKEL---------------DNLLRLKENEETTLK------GFFSEHGVWEEDEGKIGAIATEYFQDLFQS-SEPDGENVRKVVD-CVSTKISD

A0A5B6UW38 Reverse transcriptase8.2e-4531.32Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII
        E K D++++D++++   F  G++V  +G  GGL L WK  I+V +RSYS+ HID +IK++     W+F+GFYG+P    R   WNL+ +L ++ D PW +
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII

Query:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL
         GDFN+I+   EKKGG  R+P +M+ FR+T+  C LMD GYSG  FTW RG      I E LD  + N          ++ HL +++SDH P++ T    
Subjt:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL

Query:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDNDLNFEEILEAEKEL
         D+       +   FE  W   +    +++  W    +S ++ L  K+K   + L KW          KA++RK+ EI +   ED    FE +L  +++ 
Subjt:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDNDLNFEEILEAEKEL

Query:  DNLLRLKENEETTLKGFFSEHGVWEEDEG----KIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKISDQQRVKELIKS
        + L +L + +         E   WE+       + G   T++F     ++      + K+V    ++I+D+  ++E +KS
Subjt:  DNLLRLKENEETTLKGFFSEHGVWEEDEG----KIGAIATEYFQDLFQSSEPDGENVRKVVDCVSTKISDQQRVKELIKS

A0A5B6V1B3 Reverse transcriptase9.6e-4632.46Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII
        E K D+++ D++++   F  G++V  +G  GGL L WK  I+V +R+YS+ HID +IK++     W+F+GFYG+P    +   WNL+E+L ++ D PW +
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKN--HGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWII

Query:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL
         GDFNEI+   EKK G  R+P +M+ FR+T+  C LMD GYSG  FTW RG      I E LDR + N          ++ HL +++S H P++ T D  
Subjt:  GGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFL

Query:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRG--RLKGSLKKAIERKEEEILRLTNEDN------DLNFEE
        +  ++ R       FE  W   +    ++++ W    +S ++ L  K+K   + L KW     R KG +KK +    E +L    +D       D     
Subjt:  DDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRG--RLKGSLKKAIERKEEEILRLTNEDN------DLNFEE

Query:  ILEAEKELDNLLRLKENEETTLKGFF-----SEHGVWEEDEGKIGAIATEYFQDLFQS-SEPDGENVRKVVD-CVSTKISDQ
         LE +K+  N     ++  T  K  F     S++G    DE  +   A  YF++LF +    D + V + +D C++ +I+D+
Subjt:  ILEAEKELDNLLRLKENEETTLKGFF-----SEHGVWEEDEGKIGAIATEYFQDLFQS-SEPDGENVRKVVD-CVSTKISDQ

A0A6J1DUG8 uncharacterized protein LOC1110241352.0e-5142.11Show/hide
Query:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGG
        E K +     + KR+L+F+  ++V   GKSGGLML W ++ +V I+S S GHID+II   +G W+F+GFYGNP T KR  SW L+E+L    D+PWIIGG
Subjt:  EEKCDARKSDKIKRDLNFEFGLNVPCKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGG

Query:  DFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDD
        DFNEI+S  EK GG  RN SQM+        C +           W R           LDR+LIN +M  + +N KVTHL  LSSDH+PI+A+WDF   
Subjt:  DFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLMDGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDD

Query:  AQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND
             +  + +RFEE WL+    +DI+  +W        +    K+ + L  L++WN+ RL  SLK AI  KE+E+ RL   D D
Subjt:  AQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTKVKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-1628.83Show/hide
Query:  ILWSVWNCRNKLAINNEKPDLQQILRAINRNLEEQRKRQDTNTALMSLENLRNQGTWNPPPPPNCVKLNTGASWNEERKRGGVGWIFRDSSGSPIGFGCK
        +LW +W  RN+L    ++ D  ++LR    + EE   R++        +  RN       PP   VK NT A+W  E  R G+GWI R+ SG  +  G +
Subjt:  ILWSVWNCRNKLAINNEKPDLQQILRAINRNLEEQRKRQDTNTALMSLENLRNQGTWNPPPPPNCVKLNTGASWNEERKRGGVGWIFRDSSGSPIGFGCK

Query:  QINRPWSIKSLELLAIKEGLNAYREEGQFRSAPIIVEADALEVIRVLNHETLDLSDSKLVVNDIEILASSCNVISFVKCLRAGNKIAHHLARSAAGFAS-
         + R  ++   EL A++    A     +F    II E+DA  ++ +LN +       +  + DI+ L      + F    R GNK+A  +AR +  F++ 
Subjt:  QINRPWSIKSLELLAIKEGLNAYREEGQFRSAPIIVEADALEVIRVLNHETLDLSDSKLVVNDIEILASSCNVISFVKCLRAGNKIAHHLARSAAGFAS-

Query:  -AGLLSVVAVDGAYEFWVSSTL
           L S+V        W+ STL
Subjt:  -AGLLSVVAVDGAYEFWVSSTL

AT4G29090.1 Ribonuclease H-like superfamily protein9.9e-1928.99Show/hide
Query:  KEEAERVAIILWSVWNCRNKLAINNEKPDLQQILRAINRNLEEQRKRQDTNTALMSLE-NLRNQGTWNPPPPPNCVKLNTGASWNEERKRGGVGWIFRDS
        ++ ++ V  +LW +W  RN+L     + + Q++LR    +LEE R R +  +     + N  + G W  PPP   VK NT A+WN + +R G+GW+ R+ 
Subjt:  KEEAERVAIILWSVWNCRNKLAINNEKPDLQQILRAINRNLEEQRKRQDTNTALMSLE-NLRNQGTWNPPPPPNCVKLNTGASWNEERKRGGVGWIFRDS

Query:  SGSPIGFGCKQINRPWSIKSLELLAIKEGLNAYREEGQFRSAPIIVEADALEVIRVLNHETLDLSDSKLVVNDIEILASSCNVISFVKCLRAGNKIAHHL
         G     G + + +  S+   EL A++    A     +F+   +I E+D+  +I +LN++ +     K  + D++ L S    + FV   R GN +A  +
Subjt:  SGSPIGFGCKQINRPWSIKSLELLAIKEGLNAYREEGQFRSAPIIVEADALEVIRVLNHETLDLSDSKLVVNDIEILASSCNVISFVKCLRAGNKIAHHL

Query:  ARSAAGF
        AR +  F
Subjt:  ARSAAGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACTAAGAATTTCAGAAGGAGAAAAAGAGCATGTGATAGGCATTGAAGATGAGGATTTGGAGGAGCATGACAAAGAGATAGGAGAAACAGCAGTGTGCAAAAT
ATTGACAGAGAAGAAGATAAATGCTGAGAGCTTCAGGACCATGATGCCAAAAATATGGAATTTAGAAGGAGAAGTAACTATAAAGAAAGTTGGAACTAACCTCTTCGAAT
GCACGTTCAGATCTAAAAAGGGAAGAATGAAAGTGTTGGAAGGAGGTCCATGGAGTTTTGATAGAGGGCTTCTCATCTTTGAAGATATCAAGGGTCACGAGAGATACGCT
ACAATTAACTTCAGGGAAAGTGAAGAAGAAGATGATGATTCAGAGGGGGAAAGCAAGGAAAGTGACCGACAAAGTCGATCGGAGCTACCGGAAGCCGGAGAAGATCCGGT
AAACGGCGGTGAGGGAAAAGACAGCACACGGGAACAAACCTTGAGATCAGCTGATAAGATTCAAATGGTAACCTGCAAAGAAAGGAATAGTACAGAAGAAGACAAAAGGA
AAAAAGTTACTTGTATTACCGAGGAAAGCAGGGATGTGGGCCCTGCTGAGGGAGACAACAAGAAAAGCAAAGAGAAAAACAATATGGAAATTGAGTTGGGCCAATCATCA
GGATTGGGCCCCAGTAATAGATCTAAAAGCACCGAAGTGAAGTCTTCAGTGGCATGGAAAAATTCTGGCCAGATTGAAAACCAAAATATAGGTGAGGAAAATGACAAAAG
GGAAGGAAACGGTGGGATTCTAAAGGAAAAAGAAAAAGACAAAGAGGACCCCACGACAAATGAAAGAGAATTAGAAAGAGTAAAAGGCCATGAAAACACAGAGGACAGTA
GCAGCAAGAAAGATCAAAATCAGAATGGAAAAAAAGAGGAAAAGTGTGATGCTAGAAAGAGTGACAAGATCAAAAGAGATTTGAATTTTGAGTTCGGGTTGAATGTCCCC
TGCAAAGGGAAAAGCGGGGGGCTTATGTTATGTTGGAAAGCTGAGATTGATGTCCATATAAGGTCATACTCGGAAGGCCATATTGATGCAATCATTAAAAAGAACCATGG
GTTTTGGAAATTTTCAGGCTTTTATGGGAATCCGGAAACTGACAAGAGAATTTTCTCATGGAACCTAATGGAAAAACTTTGCGAAAATGATGATATTCCCTGGATAATTG
GAGGTGATTTTAATGAAATTATTTCGGAAGAGGAAAAGAAAGGCGGGGCTAGAAGAAATCCTTCTCAAATGAAGCTTTTTAGGGAGACTATAGATCGATGCAAGTTAATG
GATGGGGGCTATTCAGGTAATAAGTTCACCTGGAGAAGGGGAAAAAATAAGAGAAAGCAAATATGTGAGAGTCTTGATAGATACCTCATAAACCACACCATGGCAGTGCA
AACAGTGAATTTTAAAGTGACCCATCTAAGTTATCTTAGCTCCGACCACAAGCCAATTGTGGCTACCTGGGATTTTTTAGATGATGCTCAAAAAGTGAGGAACCATGGTA
AATTATTAAGGTTTGAGGAAGGCTGGTTAAAATTTAAAGAAACAAAGGACATTGTGAAAGATAGCTGGAGGCAACAGAATGATTCTTGCGCTCAAGGTTTAAACACCAAA
GTTAAAAATAGTTTGCTCAACCTCCATAAATGGAATAGAGGCAGATTAAAAGGTAGCTTAAAAAAGGCTATTGAGAGGAAAGAAGAAGAGATTCTGAGGTTAACCAACGA
AGATAATGATTTGAACTTTGAGGAGATCCTGGAAGCCGAGAAGGAGCTTGACAATCTGCTGCGACTCAAAGAAAACGAAGAAACCACATTAAAGGGATTTTTTTCAGAGC
ATGGTGTTTGGGAGGAAGATGAAGGGAAAATAGGGGCCATTGCGACAGAGTATTTCCAAGATCTTTTTCAGTCTTCCGAGCCTGATGGGGAGAATGTTAGAAAAGTGGTG
GACTGTGTTTCTACTAAAATTTCTGACCAACAAAGAGTTAAAGAGCTTATTAAATCAAATGGGGAGTGGGATACAACGCGAATTAAAAGAGAGTTTCTTCCTTTGGATGA
GGAGGATATCCTTGCAATACCCCTAAGCCAAACTGCTGGAAAAGATGAGATTATCTGGGATACTGACTCTAAAGGAATTTTTAGTGTGAAATCTGCATACCAACTGGCTG
TTAACTCGCAAAGAGCAAAGGAGGCCTCAGGAAATCGAGGGAGACGGGAGGACGAGGATATGCTCACGGTATGGGACTCAATATCAGACAAGATGAACAAAGAGGAAGCA
GAAAGAGTGGCTATTATCCTTTGGTCAGTGTGGAATTGCAGAAACAAGCTAGCGATTAACAATGAAAAGCCAGATCTCCAGCAGATTTTGAGAGCAATCAATCGAAATTT
AGAAGAGCAGAGGAAGAGGCAGGACACTAACACAGCTTTAATGAGCTTGGAGAACCTTCGGAATCAGGGAACGTGGAATCCTCCCCCCCCCCCCAATTGTGTTAAGCTCA
ACACGGGTGCTTCTTGGAACGAGGAGCGAAAAAGAGGCGGTGTTGGCTGGATATTTCGTGATTCCTCAGGGTCTCCGATAGGATTTGGCTGCAAGCAAATCAACAGGCCA
TGGTCGATCAAATCCCTAGAGTTGCTGGCGATCAAAGAAGGCTTAAATGCGTACCGTGAAGAAGGCCAATTCAGATCAGCTCCGATCATTGTGGAGGCGGATGCTTTGGA
AGTTATCAGAGTGCTGAACCACGAAACTTTGGATTTGTCGGACTCAAAGCTGGTGGTGAATGACATTGAGATTTTGGCTTCTTCCTGCAATGTGATCTCCTTCGTTAAAT
GCCTGAGGGCTGGGAACAAAATTGCGCACCATCTTGCGCGATCGGCGGCGGGTTTTGCGTCGGCGGGACTTCTATCGGTCGTTGCTGTCGATGGGGCGTATGAATTTTGG
GTCTCTTCCACGCTGAAAGATGATGATTTTTGTAGGGATGCTATTATCCCAATTTGGCTTTCCTCCTTAATTAATGAGGAAGTTGTTGTAAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACTAAGAATTTCAGAAGGAGAAAAAGAGCATGTGATAGGCATTGAAGATGAGGATTTGGAGGAGCATGACAAAGAGATAGGAGAAACAGCAGTGTGCAAAAT
ATTGACAGAGAAGAAGATAAATGCTGAGAGCTTCAGGACCATGATGCCAAAAATATGGAATTTAGAAGGAGAAGTAACTATAAAGAAAGTTGGAACTAACCTCTTCGAAT
GCACGTTCAGATCTAAAAAGGGAAGAATGAAAGTGTTGGAAGGAGGTCCATGGAGTTTTGATAGAGGGCTTCTCATCTTTGAAGATATCAAGGGTCACGAGAGATACGCT
ACAATTAACTTCAGGGAAAGTGAAGAAGAAGATGATGATTCAGAGGGGGAAAGCAAGGAAAGTGACCGACAAAGTCGATCGGAGCTACCGGAAGCCGGAGAAGATCCGGT
AAACGGCGGTGAGGGAAAAGACAGCACACGGGAACAAACCTTGAGATCAGCTGATAAGATTCAAATGGTAACCTGCAAAGAAAGGAATAGTACAGAAGAAGACAAAAGGA
AAAAAGTTACTTGTATTACCGAGGAAAGCAGGGATGTGGGCCCTGCTGAGGGAGACAACAAGAAAAGCAAAGAGAAAAACAATATGGAAATTGAGTTGGGCCAATCATCA
GGATTGGGCCCCAGTAATAGATCTAAAAGCACCGAAGTGAAGTCTTCAGTGGCATGGAAAAATTCTGGCCAGATTGAAAACCAAAATATAGGTGAGGAAAATGACAAAAG
GGAAGGAAACGGTGGGATTCTAAAGGAAAAAGAAAAAGACAAAGAGGACCCCACGACAAATGAAAGAGAATTAGAAAGAGTAAAAGGCCATGAAAACACAGAGGACAGTA
GCAGCAAGAAAGATCAAAATCAGAATGGAAAAAAAGAGGAAAAGTGTGATGCTAGAAAGAGTGACAAGATCAAAAGAGATTTGAATTTTGAGTTCGGGTTGAATGTCCCC
TGCAAAGGGAAAAGCGGGGGGCTTATGTTATGTTGGAAAGCTGAGATTGATGTCCATATAAGGTCATACTCGGAAGGCCATATTGATGCAATCATTAAAAAGAACCATGG
GTTTTGGAAATTTTCAGGCTTTTATGGGAATCCGGAAACTGACAAGAGAATTTTCTCATGGAACCTAATGGAAAAACTTTGCGAAAATGATGATATTCCCTGGATAATTG
GAGGTGATTTTAATGAAATTATTTCGGAAGAGGAAAAGAAAGGCGGGGCTAGAAGAAATCCTTCTCAAATGAAGCTTTTTAGGGAGACTATAGATCGATGCAAGTTAATG
GATGGGGGCTATTCAGGTAATAAGTTCACCTGGAGAAGGGGAAAAAATAAGAGAAAGCAAATATGTGAGAGTCTTGATAGATACCTCATAAACCACACCATGGCAGTGCA
AACAGTGAATTTTAAAGTGACCCATCTAAGTTATCTTAGCTCCGACCACAAGCCAATTGTGGCTACCTGGGATTTTTTAGATGATGCTCAAAAAGTGAGGAACCATGGTA
AATTATTAAGGTTTGAGGAAGGCTGGTTAAAATTTAAAGAAACAAAGGACATTGTGAAAGATAGCTGGAGGCAACAGAATGATTCTTGCGCTCAAGGTTTAAACACCAAA
GTTAAAAATAGTTTGCTCAACCTCCATAAATGGAATAGAGGCAGATTAAAAGGTAGCTTAAAAAAGGCTATTGAGAGGAAAGAAGAAGAGATTCTGAGGTTAACCAACGA
AGATAATGATTTGAACTTTGAGGAGATCCTGGAAGCCGAGAAGGAGCTTGACAATCTGCTGCGACTCAAAGAAAACGAAGAAACCACATTAAAGGGATTTTTTTCAGAGC
ATGGTGTTTGGGAGGAAGATGAAGGGAAAATAGGGGCCATTGCGACAGAGTATTTCCAAGATCTTTTTCAGTCTTCCGAGCCTGATGGGGAGAATGTTAGAAAAGTGGTG
GACTGTGTTTCTACTAAAATTTCTGACCAACAAAGAGTTAAAGAGCTTATTAAATCAAATGGGGAGTGGGATACAACGCGAATTAAAAGAGAGTTTCTTCCTTTGGATGA
GGAGGATATCCTTGCAATACCCCTAAGCCAAACTGCTGGAAAAGATGAGATTATCTGGGATACTGACTCTAAAGGAATTTTTAGTGTGAAATCTGCATACCAACTGGCTG
TTAACTCGCAAAGAGCAAAGGAGGCCTCAGGAAATCGAGGGAGACGGGAGGACGAGGATATGCTCACGGTATGGGACTCAATATCAGACAAGATGAACAAAGAGGAAGCA
GAAAGAGTGGCTATTATCCTTTGGTCAGTGTGGAATTGCAGAAACAAGCTAGCGATTAACAATGAAAAGCCAGATCTCCAGCAGATTTTGAGAGCAATCAATCGAAATTT
AGAAGAGCAGAGGAAGAGGCAGGACACTAACACAGCTTTAATGAGCTTGGAGAACCTTCGGAATCAGGGAACGTGGAATCCTCCCCCCCCCCCCAATTGTGTTAAGCTCA
ACACGGGTGCTTCTTGGAACGAGGAGCGAAAAAGAGGCGGTGTTGGCTGGATATTTCGTGATTCCTCAGGGTCTCCGATAGGATTTGGCTGCAAGCAAATCAACAGGCCA
TGGTCGATCAAATCCCTAGAGTTGCTGGCGATCAAAGAAGGCTTAAATGCGTACCGTGAAGAAGGCCAATTCAGATCAGCTCCGATCATTGTGGAGGCGGATGCTTTGGA
AGTTATCAGAGTGCTGAACCACGAAACTTTGGATTTGTCGGACTCAAAGCTGGTGGTGAATGACATTGAGATTTTGGCTTCTTCCTGCAATGTGATCTCCTTCGTTAAAT
GCCTGAGGGCTGGGAACAAAATTGCGCACCATCTTGCGCGATCGGCGGCGGGTTTTGCGTCGGCGGGACTTCTATCGGTCGTTGCTGTCGATGGGGCGTATGAATTTTGG
GTCTCTTCCACGCTGAAAGATGATGATTTTTGTAGGGATGCTATTATCCCAATTTGGCTTTCCTCCTTAATTAATGAGGAAGTTGTTGTAAACTTTTAA
Protein sequenceShow/hide protein sequence
MEKLRISEGEKEHVIGIEDEDLEEHDKEIGETAVCKILTEKKINAESFRTMMPKIWNLEGEVTIKKVGTNLFECTFRSKKGRMKVLEGGPWSFDRGLLIFEDIKGHERYA
TINFRESEEEDDDSEGESKESDRQSRSELPEAGEDPVNGGEGKDSTREQTLRSADKIQMVTCKERNSTEEDKRKKVTCITEESRDVGPAEGDNKKSKEKNNMEIELGQSS
GLGPSNRSKSTEVKSSVAWKNSGQIENQNIGEENDKREGNGGILKEKEKDKEDPTTNERELERVKGHENTEDSSSKKDQNQNGKKEEKCDARKSDKIKRDLNFEFGLNVP
CKGKSGGLMLCWKAEIDVHIRSYSEGHIDAIIKKNHGFWKFSGFYGNPETDKRIFSWNLMEKLCENDDIPWIIGGDFNEIISEEEKKGGARRNPSQMKLFRETIDRCKLM
DGGYSGNKFTWRRGKNKRKQICESLDRYLINHTMAVQTVNFKVTHLSYLSSDHKPIVATWDFLDDAQKVRNHGKLLRFEEGWLKFKETKDIVKDSWRQQNDSCAQGLNTK
VKNSLLNLHKWNRGRLKGSLKKAIERKEEEILRLTNEDNDLNFEEILEAEKELDNLLRLKENEETTLKGFFSEHGVWEEDEGKIGAIATEYFQDLFQSSEPDGENVRKVV
DCVSTKISDQQRVKELIKSNGEWDTTRIKREFLPLDEEDILAIPLSQTAGKDEIIWDTDSKGIFSVKSAYQLAVNSQRAKEASGNRGRREDEDMLTVWDSISDKMNKEEA
ERVAIILWSVWNCRNKLAINNEKPDLQQILRAINRNLEEQRKRQDTNTALMSLENLRNQGTWNPPPPPNCVKLNTGASWNEERKRGGVGWIFRDSSGSPIGFGCKQINRP
WSIKSLELLAIKEGLNAYREEGQFRSAPIIVEADALEVIRVLNHETLDLSDSKLVVNDIEILASSCNVISFVKCLRAGNKIAHHLARSAAGFASAGLLSVVAVDGAYEFW
VSSTLKDDDFCRDAIIPIWLSSLINEEVVVNF