; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018317 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018317
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold3:5533547..5536306
RNA-Seq ExpressionSpg018317
SyntenySpg018317
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]6.8e-0635Show/hide
Query:  LKRDFLFERGFGDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD
        ++R F++ RG     P F+ + I  H W  FC  P +    +VR+FYAN +  E     +RG  +  +  AINSL++L D
Subjt:  LKRDFLFERGFGDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.7e-0737.76Show/hide
Query:  FVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQ
        FV + A+  Y  +  R   FE GF        NL   +   +T H W +F   P  VN+ IV+EFY+NI E      MVRG+++  +P AIN  F LQ
Subjt:  FVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQ

PKC51568.1 hypothetical protein RhiirA1_483454, partial [Rhizophagus irregularis]2.6e-0535.64Show/hide
Query:  TEEPRMPYARFVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGA
        ++   M    F  D AR ++  ++ +  + ERGF      GD     L + I   GW+ FC  PE+V   I+REFYAN  E      +VRG+ VD S  A
Subjt:  TEEPRMPYARFVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGA

Query:  I
        I
Subjt:  I

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]2.7e-0730.61Show/hide
Query:  FVKDLARVKYLEMLKRDFLFERGFGDNLPHFLRAGITN----HGWDQFCTKPE-SVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD--
        F    A  +Y  +++R  +FERG   +    + + I N      W +FC  PE   N  ++ EFYAN+ + E     VRGV VD S GAIN+L    D  
Subjt:  FVKDLARVKYLEMLKRDFLFERGFGDNLPHFLRAGITN----HGWDQFCTKPE-SVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD--

Query:  FPHVGYNEMVVAPSNDQLNAAVREDGIEGISGGG--QIIFPNIARLD
        F + GY + +  P+ D++ + +   G   +   G  ++   ++ RLD
Subjt:  FPHVGYNEMVVAPSNDQLNAAVREDGIEGISGGG--QIIFPNIARLD

XP_017248025.1 PREDICTED: uncharacterized protein LOC108219212 [Daucus carota subsp. sativus]7.5e-0531.5Show/hide
Query:  RFVKDLARVKYLEMLKRDFLFERGF----GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQDFP
        +F    A+ +++ ++ +    ERGF    GD     L   I   GW+  C  PE+V  +IVREFYAN   E+   A+VRG+ VD +  AI  L  +Q+  
Subjt:  RFVKDLARVKYLEMLKRDFLFERGF----GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQDFP

Query:  HVGYNEMVVAPSNDQLNAAVREDGIEG
            + +     N  L+  V E  + G
Subjt:  HVGYNEMVVAPSNDQLNAAVREDGIEG

TrEMBL top hitse value%identityAlignment
A0A4Q3ENY7 Uncharacterized protein1.3e-0730.61Show/hide
Query:  FVKDLARVKYLEMLKRDFLFERGFGDNLPHFLRAGITN----HGWDQFCTKPE-SVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD--
        F    A  +Y  +++R  +FERG   +    + + I N      W +FC  PE   N  ++ EFYAN+ + E     VRGV VD S GAIN+L    D  
Subjt:  FVKDLARVKYLEMLKRDFLFERGFGDNLPHFLRAGITN----HGWDQFCTKPE-SVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQD--

Query:  FPHVGYNEMVVAPSNDQLNAAVREDGIEGISGGG--QIIFPNIARLD
        F + GY + +  P+ D++ + +   G   +   G  ++   ++ RLD
Subjt:  FPHVGYNEMVVAPSNDQLNAAVREDGIEGISGGG--QIIFPNIARLD

A0A6A2ZUE4 Uncharacterized protein1.3e-0737.76Show/hide
Query:  FVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQ
        FV + A+  Y  +  R   FE GF        NL   +   +T H W +F   P  VN+ IV+EFY+NI E      MVRG+++  +P AIN  F LQ
Subjt:  FVKDLARVKYLEMLKRDFLFERGF------GDNLPHFLRAGITNHGWDQFCTKPESVNSNIVREFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGGAAGAAGGGAAAGAGATACTGAGGAAGAAGAGGTGTCAGTTACACCCGAGGCACCGAAGACGAGAACGACGAGAAGGAAAACACCAGAAGAAAG
AGAGGCCAAAAGACGGAGAAGGCAACAAAGAGCTGAAGCAACAGAGGAAAAGCAAGCAGAAGACGTACCGAAACAAGGGAACGGTCAAGGAGCTCAAGAGCAGCAGGTTC
AGGCGGATATTGTGCCAGAACCACTGCGTCGCCGCCGCCGCAAGCAAAAAGCGGGTATCAGGGTGGTTAGGGTAGACATTTCATCTCCATCAACAGTCGAATCTGAGAAG
GAGAATACAGAAAATGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAGACTGAAGAAAAGGCCTTGACGAAGCAACAAGAAGAAAGGGGCAAAGGAGTTGCTGAAGCAAC
AGTTGAAGCAGAGGAGGCTGATACTGAGGAGCCAAGAATGCCGTATGCGCGCTTCGTCAAGGATCTTGCCAGAGTAAAATATCTGGAAATGCTGAAGAGGGATTTCTTGT
TCGAAAGAGGTTTCGGTGATAATTTACCACATTTCTTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCACGAAACCAGAGTCAGTAAACTCGAATATCGTT
CGTGAGTTTTATGCGAACATAGATGAAGAGGAAGGGTTTCAAGCCATGGTCCGAGGGGTTGCTGTAGACTCGAGCCCAGGTGCGATCAACTCTTTATTTAATCTCCAGGA
TTTTCCACATGTCGGATATAATGAGATGGTGGTAGCACCATCTAACGATCAGTTGAACGCGGCTGTGAGAGAAGATGGAATTGAAGGGATCAGTGGAGGTGGGCAAATTA
TTTTCCCAAATATAGCGAGGCTTGACAAGGGGATTATTGACACACCCAACATAGCGAGGCTTCAATGGACTCAAGAAGCTCAGCAAGGGGGGCTGGTAAAGGTTGAAGGT
AGTGTTGGGATATCTGTTTTGATTAAGTTGTGCTATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGGAAGAAGGGAAAGAGATACTGAGGAAGAAGAGGTGTCAGTTACACCCGAGGCACCGAAGACGAGAACGACGAGAAGGAAAACACCAGAAGAAAG
AGAGGCCAAAAGACGGAGAAGGCAACAAAGAGCTGAAGCAACAGAGGAAAAGCAAGCAGAAGACGTACCGAAACAAGGGAACGGTCAAGGAGCTCAAGAGCAGCAGGTTC
AGGCGGATATTGTGCCAGAACCACTGCGTCGCCGCCGCCGCAAGCAAAAAGCGGGTATCAGGGTGGTTAGGGTAGACATTTCATCTCCATCAACAGTCGAATCTGAGAAG
GAGAATACAGAAAATGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAGACTGAAGAAAAGGCCTTGACGAAGCAACAAGAAGAAAGGGGCAAAGGAGTTGCTGAAGCAAC
AGTTGAAGCAGAGGAGGCTGATACTGAGGAGCCAAGAATGCCGTATGCGCGCTTCGTCAAGGATCTTGCCAGAGTAAAATATCTGGAAATGCTGAAGAGGGATTTCTTGT
TCGAAAGAGGTTTCGGTGATAATTTACCACATTTCTTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCACGAAACCAGAGTCAGTAAACTCGAATATCGTT
CGTGAGTTTTATGCGAACATAGATGAAGAGGAAGGGTTTCAAGCCATGGTCCGAGGGGTTGCTGTAGACTCGAGCCCAGGTGCGATCAACTCTTTATTTAATCTCCAGGA
TTTTCCACATGTCGGATATAATGAGATGGTGGTAGCACCATCTAACGATCAGTTGAACGCGGCTGTGAGAGAAGATGGAATTGAAGGGATCAGTGGAGGTGGGCAAATTA
TTTTCCCAAATATAGCGAGGCTTGACAAGGGGATTATTGACACACCCAACATAGCGAGGCTTCAATGGACTCAAGAAGCTCAGCAAGGGGGGCTGGTAAAGGTTGAAGGT
AGTGTTGGGATATCTGTTTTGATTAAGTTGTGCTATGACTGA
Protein sequenceShow/hide protein sequence
MAKTRGRRERDTEEEEVSVTPEAPKTRTTRRKTPEEREAKRRRRQQRAEATEEKQAEDVPKQGNGQGAQEQQVQADIVPEPLRRRRRKQKAGIRVVRVDISSPSTVESEK
ENTENEDQEKEETEKKTEEKALTKQQEERGKGVAEATVEAEEADTEEPRMPYARFVKDLARVKYLEMLKRDFLFERGFGDNLPHFLRAGITNHGWDQFCTKPESVNSNIV
REFYANIDEEEGFQAMVRGVAVDSSPGAINSLFNLQDFPHVGYNEMVVAPSNDQLNAAVREDGIEGISGGGQIIFPNIARLDKGIIDTPNIARLQWTQEAQQGGLVKVEG
SVGISVLIKLCYD