; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018333 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018333
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Genome locationscaffold3:12023096..12025886
RNA-Seq ExpressionSpg018333
SyntenySpg018333
Gene Ontology termsNA
InterPro domainsIPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036775.1 Kanadaptin [Cucurbita argyrosperma subsp. argyrosperma]7.7e-4590.65Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
        KH+SML+
Subjt:  KHVSMLD

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]5.7e-4893.64Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA KE+RLPNRD+LAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLD
        MLDKHVSML+
Subjt:  MLDKHVSMLD

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]1.1e-4691.82Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA KE+RLPNRDELAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLD
        MLDKHVSML+
Subjt:  MLDKHVSMLD

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]4.5e-4591.59Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
        KH+SML+
Subjt:  KHVSMLD

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]4.8e-4792.73Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA KE++ PNRDELAESLNEFFTSVSEM+KSDLLGSSNQLALLE+MNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLD
        MLDKHVSML+
Subjt:  MLDKHVSMLD

TrEMBL top hitse value%identityAlignment
A0A0A0KW18 Uncharacterized protein2.8e-4893.64Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA KE+RLPNRD+LAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLD
        MLDKHVSML+
Subjt:  MLDKHVSMLD

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 25.2e-4791.82Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA KE+RLPNRDELAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLD
        MLDKHVSML+
Subjt:  MLDKHVSMLD

A0A6J1DL99 biogenesis of lysosome-related organelles complex 1 subunit 2 isoform X44.9e-3791.21Show/hide
Query:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQ
        MAGKE++LPNRDELA SLNEFFTSVS+M+KSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFD YI+QIE IEHQ
Subjt:  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQ

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 22.2e-4591.59Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
        KH+SML+
Subjt:  KHVSMLD

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 22.2e-4591.59Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
        KH+SML+
Subjt:  KHVSMLD

SwissProt top hitse value%identityAlignment
F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 21.5e-3066.34Show/hide
Query:  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSVS MVKS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  D
        +
Subjt:  D

Q32WR5 Biogenesis of lysosome-related organelles complex-1 subunit 24.0e-0426.17Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
         +   L+
Subjt:  KHVSMLD

Q4R7C8 Biogenesis of lysosome-related organelles complex 1 subunit 22.4e-0426.17Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
         +   L+
Subjt:  KHVSMLD

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 24.2e-0932.04Show/hide
Query:  LPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS
        LP  ++L  S  E FT VS  +KS+L  + +   LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y ++I +++  VT+ E  + +LD++  
Subjt:  LPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLD
         L+
Subjt:  MLD

Q6QNY1 Biogenesis of lysosome-related organelles complex 1 subunit 22.4e-0426.17Show/hide
Query:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLD
         +   L+
Subjt:  KHVSMLD

Arabidopsis top hitse value%identityAlignment
AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.1.0e-3166.34Show/hide
Query:  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RD+LAESL   FTSVS MVKS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  D
        +
Subjt:  D


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAAAAGAGCAACGCTTGCCGAATAGAGACGAGCTCGCTGAATCCCTCAACGAATTCTTCACCAGCGTATCCGAAATGGTCAAATCGGACCTTCTTGGATCAAG
TAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCCGAAGAGTACAAAGGTTTTGGCGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGTCAA
AGAGTGGTGGCTTTGATGAGTACATAAACCAGATTGAGAAAATAGAGCATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGACAAGCATGTTTCCATGCTGGAT
CCTCTCTCAGAAACTGTTCTTGGTGTCTTGTCTGTTACAGTGATACCATTCTACTGTGCATTTGAGGGAAGAACTTCTTCTGATAGCAGGGAGATCCGAAACCAGACTCT
GCATTCACCATGGAGCTGTGAATCTCATGGGATAAAGGTATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAAAAGAGCAACGCTTGCCGAATAGAGACGAGCTCGCTGAATCCCTCAACGAATTCTTCACCAGCGTATCCGAAATGGTCAAATCGGACCTTCTTGGATCAAG
TAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCCGAAGAGTACAAAGGTTTTGGCGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGTCAA
AGAGTGGTGGCTTTGATGAGTACATAAACCAGATTGAGAAAATAGAGCATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGACAAGCATGTTTCCATGCTGGAT
CCTCTCTCAGAAACTGTTCTTGGTGTCTTGTCTGTTACAGTGATACCATTCTACTGTGCATTTGAGGGAAGAACTTCTTCTGATAGCAGGGAGATCCGAAACCAGACTCT
GCATTCACCATGGAGCTGTGAATCTCATGGGATAAAGGTATTATAA
Protein sequenceShow/hide protein sequence
MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD
PLSETVLGVLSVTVIPFYCAFEGRTSSDSREIRNQTLHSPWSCESHGIKVL