; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018354 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018354
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold3:8006329..8019824
RNA-Seq ExpressionSpg018354
SyntenySpg018354
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-1647.52Show/hide
Query:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------
        L TLSVL DND VVSAG+ PLRQR+WEC   P    TS   ++        S  LVEIELPVPD LPTS ESSRS+SS+  +   E   V +        
Subjt:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------

Query:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF
                        DDV WLHAIF  K AGG GGGVT++
Subjt:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]5.4e-2449.36Show/hide
Query:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI
        VQ  ++ L+ + P      + TG +      SL TLSVLRDND VVSAG     +      +APLH RTSKRWLYWACPT  RSVML          VEI
Subjt:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI

Query:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT
        EL VPDTLPTS ESS S+S S         +  DDV WLH +F  K  GG GG VT
Subjt:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]5.4e-2449.36Show/hide
Query:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI
        VQ  ++ L+ + P      + TG +      SL TLSVLRDND VVSAG     +      +APLH RTSKRWLYWACPT  RSVML          VEI
Subjt:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI

Query:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT
        EL VPDTLPTS ESS S+S S         +  DDV WLH +F  K  GG GG VT
Subjt:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]8.6e-1463.64Show/hide
Query:  YRVHTGYISLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVE
        YRVHT YISLLTLSVLRDN+ ++S  R PL +      + PLH RTSKRWLYWAC TQ   VMLV+
Subjt:  YRVHTGYISLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVE

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-1647.52Show/hide
Query:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------
        L TLSVL DND VVSAG+ PLRQR+WEC   P    TS   ++        S  LVEIELPVPD LPTS ESSRS+SS+  +   E   V +        
Subjt:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------

Query:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF
                        DDV WLHAIF  K AGG GGGVT++
Subjt:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase2.0e-1647.52Show/hide
Query:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------
        L TLSVL DND VVSAG+ PLRQR+WEC   P    TS   ++        S  LVEIELPVPD LPTS ESSRS+SS+  +   E   V +        
Subjt:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------

Query:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF
                        DDV WLHAIF  K AGG GGGVT++
Subjt:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF

A0A5A7VGQ5 Uncharacterized protein2.6e-2449.36Show/hide
Query:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI
        VQ  ++ L+ + P      + TG +      SL TLSVLRDND VVSAG     +      +APLH RTSKRWLYWACPT  RSVML          VEI
Subjt:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI

Query:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT
        EL VPDTLPTS ESS S+S S         +  DDV WLH +F  K  GG GG VT
Subjt:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT

A0A5D3BG85 Uncharacterized protein2.6e-2449.36Show/hide
Query:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI
        VQ  ++ L+ + P      + TG +      SL TLSVLRDND VVSAG     +      +APLH RTSKRWLYWACPT  RSVML          VEI
Subjt:  VQVESEALFDIEPEAMWYRVHTGYI------SLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVML----------VEI

Query:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT
        EL VPDTLPTS ESS S+S S         +  DDV WLH +F  K  GG GG VT
Subjt:  ELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVT

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein4.2e-1463.64Show/hide
Query:  YRVHTGYISLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVE
        YRVHT YISLLTLSVLRDN+ ++S  R PL +      + PLH RTSKRWLYWAC TQ   VMLV+
Subjt:  YRVHTGYISLLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVE

A0A5D3BTP3 Reverse transcriptase2.0e-1647.52Show/hide
Query:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------
        L TLSVL DND VVSAG+ PLRQR+WEC   P    TS   ++        S  LVEIELPVPD LPTS ESSRS+SS+  +   E   V +        
Subjt:  LLTLSVLRDNDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQ---EGQRVSL--------

Query:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF
                        DDV WLHAIF  K AGG GGGVT++
Subjt:  --------------EEDDVRWLHAIFWTKLAGGLGGGVTSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGGCAATTCTAGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTTA
TATTCCGTTGTTGACGTTGAGTGTACTCCGTGATGACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCTAGAGGGTCAG
CGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTTCGGGCTTAGCTAGCAGGTGGTCCGGGAGGGGGTGCGACAACTTGGTATCAGAGCAGTTAGCT
CCATGGGAAACGAAACATGGGAACAAGAAGAAGAAGCTTTTTGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCAAGCAAAACCAGCAATTGCAGAATCTGTGTTCAA
CCTGTCAACCCCTGGTTTTTTATTCGTTTTGAGCTACACAGAAGGAATTAAGAGGATTTTCGTGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCAT
GGGGTGTACAAGTTGAATCAGAAGCTCTATTTGATATTGAGCCCGAGGCTATGTGGTACCGTGTCCACACAGGTTATATTTCGTTGTTGACGTTGAGTGTACTCCGTGAC
AACGATCCTGTCGTGAGTGCTGGGCGGACCCCACTACGACAAAGACAATGGGAGTGCTGGCAGGCCCCACTACATCATAGGACTAGTAAACGTTGGTTGTACTGGGCGTG
CCCTACACAACATAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACTGAAAGTTCAAGATCAAGCTCCAGTTCTACGTTTCAGG
AGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCTGGACTAAGCTAGCAGGTGGTCTGGGAGGAGGTGTGACATCCTTTGTCTCTCGT
TTTCTTCAATCGCAGCAGCGTGTCTTCATCTCTCGCGTGGTCTTCTTCATCTTGCCGTGTGTGACCGCCTGTAGCAGCATTCTTACCCTCTCTCGCGTGTTCCAGCCTCC
GTCGCCAACACCTCCCCTTCGGTTTTCGCAAGGCAGCGGCTGGGCGTCCCTCCTCCGGTGGTTCTTCCTCCCGTTCGTTCCCTCCGGCGGTACCCGTGACAATGCAGTAG
CGGTTCGGTGGCTCTCGGTTCGTTCGACCAGCAGTAGCGTGGGAATGGTCGTGATTGCTTCATTTCTCTGCATTCTTTTTCAAGGTACCCACCACGTTTGGAAGCCTAAT
CGTCATGTGGAGCGGTTTTTGGAAGCTTGTGCAGCAAGCTTGTTGGCTGATTTAGCAACAGAAGAAGAGCTGGTGTTGGTGTTTGAGTATTTAAAATGCAAGATCTTCTC
CTCAGTCTTGTTTGCCTCTGTTATTCTAGTGATCAATCTTCGCAACTTCAATCCTTGGGGTCTTCAAGGATTAAGTAATTATGGTAGTCATAGCTTGAAATTACTTGGAT
GCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGTCAGATGTTGCTGAACGTATATGGTTTTAGTGACGTGCTAAAA
GTGTCACTGAACATCTTTTTCAGCGACAATGGGTCGGACGTTGCTGAAAGTGATCTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGGCAATTCTAGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTTA
TATTCCGTTGTTGACGTTGAGTGTACTCCGTGATGACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCTAGAGGGTCAG
CGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTTCGGGCTTAGCTAGCAGGTGGTCCGGGAGGGGGTGCGACAACTTGGTATCAGAGCAGTTAGCT
CCATGGGAAACGAAACATGGGAACAAGAAGAAGAAGCTTTTTGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCAAGCAAAACCAGCAATTGCAGAATCTGTGTTCAA
CCTGTCAACCCCTGGTTTTTTATTCGTTTTGAGCTACACAGAAGGAATTAAGAGGATTTTCGTGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCAT
GGGGTGTACAAGTTGAATCAGAAGCTCTATTTGATATTGAGCCCGAGGCTATGTGGTACCGTGTCCACACAGGTTATATTTCGTTGTTGACGTTGAGTGTACTCCGTGAC
AACGATCCTGTCGTGAGTGCTGGGCGGACCCCACTACGACAAAGACAATGGGAGTGCTGGCAGGCCCCACTACATCATAGGACTAGTAAACGTTGGTTGTACTGGGCGTG
CCCTACACAACATAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACTGAAAGTTCAAGATCAAGCTCCAGTTCTACGTTTCAGG
AGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCTGGACTAAGCTAGCAGGTGGTCTGGGAGGAGGTGTGACATCCTTTGTCTCTCGT
TTTCTTCAATCGCAGCAGCGTGTCTTCATCTCTCGCGTGGTCTTCTTCATCTTGCCGTGTGTGACCGCCTGTAGCAGCATTCTTACCCTCTCTCGCGTGTTCCAGCCTCC
GTCGCCAACACCTCCCCTTCGGTTTTCGCAAGGCAGCGGCTGGGCGTCCCTCCTCCGGTGGTTCTTCCTCCCGTTCGTTCCCTCCGGCGGTACCCGTGACAATGCAGTAG
CGGTTCGGTGGCTCTCGGTTCGTTCGACCAGCAGTAGCGTGGGAATGGTCGTGATTGCTTCATTTCTCTGCATTCTTTTTCAAGGTACCCACCACGTTTGGAAGCCTAAT
CGTCATGTGGAGCGGTTTTTGGAAGCTTGTGCAGCAAGCTTGTTGGCTGATTTAGCAACAGAAGAAGAGCTGGTGTTGGTGTTTGAGTATTTAAAATGCAAGATCTTCTC
CTCAGTCTTGTTTGCCTCTGTTATTCTAGTGATCAATCTTCGCAACTTCAATCCTTGGGGTCTTCAAGGATTAAGTAATTATGGTAGTCATAGCTTGAAATTACTTGGAT
GCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGTCAGATGTTGCTGAACGTATATGGTTTTAGTGACGTGCTAAAA
GTGTCACTGAACATCTTTTTCAGCGACAATGGGTCGGACGTTGCTGAAAGTGATCTTCAGTGA
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLWAILDKLVGNLVFISSGYIPLLTLSVLRDDDAVVEIELPVPDTLPTSAESSRGSAGIVRGGRCPLASRHLSGLASRWSGRGCDNLVSEQLA
PWETKHGNKKKKLFVVLRLKKIGKAQAKPAIAESVFNLSTPGFLFVLSYTEGIKRIFVQTRRISGVLWCFEHSWGVQVESEALFDIEPEAMWYRVHTGYISLLTLSVLRD
NDPVVSAGRTPLRQRQWECWQAPLHHRTSKRWLYWACPTQHRSVMLVEIELPVPDTLPTSTESSRSSSSSTFQEGQRVSLEEDDVRWLHAIFWTKLAGGLGGGVTSFVSR
FLQSQQRVFISRVVFFILPCVTACSSILTLSRVFQPPSPTPPLRFSQGSGWASLLRWFFLPFVPSGGTRDNAVAVRWLSVRSTSSSVGMVVIASFLCILFQGTHHVWKPN
RHVERFLEACAASLLADLATEEELVLVFEYLKCKIFSSVLFASVILVINLRNFNPWGLQGLSNYGSHSLKLLGCMNGFDKAPPFLYGNVKNVATTGQMLLNVYGFSDVLK
VSLNIFFSDNGSDVAESDLQ