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Spg018393 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018393
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L11
Genome locationscaffold3:7011842..7016401
RNA-Seq ExpressionSpg018393
SyntenySpg018393
Gene Ontology termsNA
InterPro domainsIPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP83875.1 60S ribosomal protein l11-2 [Phtheirospermum japonicum]9.4e-0790.32Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGRHRRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

KAG1335274.1 60S ribosomal protein L11 [Cocos nucifera]8.0e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

XP_022148025.1 60S ribosomal protein L11 isoform X1 [Momordica charantia]8.0e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

XP_025826208.1 60S ribosomal protein L11-like [Panicum hallii]8.0e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

XP_041007149.1 60S ribosomal protein L11 [Juglans microcarpa x Juglans regia]8.0e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

TrEMBL top hitse value%identityAlignment
A0A1S3W0G4 60S ribosomal protein L113.9e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

A0A1U8J3P8 60S ribosomal protein L113.9e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

A0A5D2GGK4 Uncharacterized protein3.9e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

A0A6J5UI82 Uncharacterized protein3.9e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

Q6DXR9 Putative ribosomal protein3.9e-0687.1Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L115.2e-0883.87Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

P42794 60S ribosomal protein L11-22.6e-0777.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

P42795 60S ribosomal protein L11-12.6e-0777.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

P46287 60S ribosomal protein L115.2e-0880.65Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        VGR RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

Q0DK10 60S ribosomal protein L115.2e-0883.87Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCKSR+GIQH+VTKEDAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.8e-0877.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

AT3G58700.1 Ribosomal L5P family protein1.8e-0877.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

AT4G18730.1 ribosomal protein L16B1.8e-0877.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

AT5G45775.1 Ribosomal L5P family protein1.8e-0877.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE

AT5G45775.2 Ribosomal L5P family protein1.8e-0877.42Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE
        V R RRCK+R+GIQH+VTK+DAMKW QVKYE
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCGCCGCACCAGCACCACACTGCCCTTGGAGATGGCGTCCAACCGCCGCCCCGCCTCAGTAACCCGCACACCCCGCGAGAAACGCCAACAGCGCCGCCCTTTCT
CGGTGAGTTCTCTCTCCCTTTTCGATCTCTCTCTGTCTCTCGACATTCTTTCCATCTCCCGCAGCGCTCTTCCTCCGATCATCGTCCGATGCACGCCCAGCTTGGGCGAC
AGCGACTCGATGGCGGTTCTACACACGAACAACAGGCACGTGAGTTCATCCTCGTGTTTCCACCAGTCCAGCAAGATTGGACTCGTGCAAGTGTCGTGCAGAGGCTGTGG
AGACTGTGGGTGCTCGGGCTCGCGCGAATTGTCTTCAGAAAGAAGTGGACTGATGAGGATGAAATGATTAAAGAAAAACAAGTTAGATATAGTATTCAATGTCCATTTTT
TCTGCTTTCTGTTGCTGAAAGCCTTGCCATTGTTTCTGAGGGAGGCAAGTGTTCTAATATGGGTTTGCAAGTTTATTGTTTGGTTTCTATGGAAAATTTCACTGTTGTCA
AACCAGAGTATACCCAAGATGAAAAAATAAAGGTTCTTCAATCAGTATCGTCATTTAAGAGTTCAATCGTCTCATTCTTGGTCCTTAAATTACATCGAAGTTCAATTTTG
GTGCTTGGCAGTGTCTTCAAATTGGTGCAATTCCATGATTCTTTTGTTTCAGGAGTTGTACAGGGAGTTAAAGTCTCGGAAGACGAAGAGTACGATGAGGACGAGCTGGT
TGCTAAAAGGGAGAGGCCTTCTTCTACTTCCAATGTTAATAGTAGCATCAAAAACAACAAAGAAAATGTTGGGCGTCACAGGAGGTGCAAGTCTCGCATTGGGATCCAGC
ACAAAGTCACAAAGGAGGATGCCATGAAGTGGCTCCAGGTGAAATATGAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCGCCGCACCAGCACCACACTGCCCTTGGAGATGGCGTCCAACCGCCGCCCCGCCTCAGTAACCCGCACACCCCGCGAGAAACGCCAACAGCGCCGCCCTTTCT
CGGTGAGTTCTCTCTCCCTTTTCGATCTCTCTCTGTCTCTCGACATTCTTTCCATCTCCCGCAGCGCTCTTCCTCCGATCATCGTCCGATGCACGCCCAGCTTGGGCGAC
AGCGACTCGATGGCGGTTCTACACACGAACAACAGGCACGTGAGTTCATCCTCGTGTTTCCACCAGTCCAGCAAGATTGGACTCGTGCAAGTGTCGTGCAGAGGCTGTGG
AGACTGTGGGTGCTCGGGCTCGCGCGAATTGTCTTCAGAAAGAAGTGGACTGATGAGGATGAAATGATTAAAGAAAAACAAGTTAGATATAGTATTCAATGTCCATTTTT
TCTGCTTTCTGTTGCTGAAAGCCTTGCCATTGTTTCTGAGGGAGGCAAGTGTTCTAATATGGGTTTGCAAGTTTATTGTTTGGTTTCTATGGAAAATTTCACTGTTGTCA
AACCAGAGTATACCCAAGATGAAAAAATAAAGGTTCTTCAATCAGTATCGTCATTTAAGAGTTCAATCGTCTCATTCTTGGTCCTTAAATTACATCGAAGTTCAATTTTG
GTGCTTGGCAGTGTCTTCAAATTGGTGCAATTCCATGATTCTTTTGTTTCAGGAGTTGTACAGGGAGTTAAAGTCTCGGAAGACGAAGAGTACGATGAGGACGAGCTGGT
TGCTAAAAGGGAGAGGCCTTCTTCTACTTCCAATGTTAATAGTAGCATCAAAAACAACAAAGAAAATGTTGGGCGTCACAGGAGGTGCAAGTCTCGCATTGGGATCCAGC
ACAAAGTCACAAAGGAGGATGCCATGAAGTGGCTCCAGGTGAAATATGAA
Protein sequenceShow/hide protein sequence
MNPPHQHHTALGDGVQPPPRLSNPHTPRETPTAPPFLGEFSLPFRSLSVSRHSFHLPQRSSSDHRPMHAQLGRQRLDGGSTHEQQAREFILVFPPVQQDWTRASVVQRLW
RLWVLGLARIVFRKKWTDEDEMIKEKQVRYSIQCPFFLLSVAESLAIVSEGGKCSNMGLQVYCLVSMENFTVVKPEYTQDEKIKVLQSVSSFKSSIVSFLVLKLHRSSIL
VLGSVFKLVQFHDSFVSGVVQGVKVSEDEEYDEDELVAKRERPSSTSNVNSSIKNNKENVGRHRRCKSRIGIQHKVTKEDAMKWLQVKYE