; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018398 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018398
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme
Genome locationscaffold3:4762827..4766874
RNA-Seq ExpressionSpg018398
SyntenySpg018398
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006281 - DNA repair (biological process)
GO:0016574 - histone ubiquitination (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH03917.1 hypothetical protein Prudu_014915 [Prunus dulcis]8.6e-4675Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEH-KSLGQHVLHVAKKRL
        DVAAI TSIQ+   +   H+ +  KK L
Subjt:  DVAAIFTSIQEH-KSLGQHVLHVAKKRL

DAD34807.1 TPA_asm: hypothetical protein HUJ06_005447 [Nelumbo nucifera]3.9e-4683.04Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEH
        DVAAI TSIQ H
Subjt:  DVAAIFTSIQEH

KAG4392586.1 hypothetical protein GLYMA_04G173300v4 [Glycine max]6.6e-4680.87Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEHKSL
        DVAAI TSIQ   S+
Subjt:  DVAAIFTSIQEHKSL

KYP46080.1 Ubiquitin-conjugating enzyme E2 2 [Cajanus cajan]6.6e-4680.87Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEHKSL
        DVAAI TSIQ   S+
Subjt:  DVAAIFTSIQEHKSL

RYR31974.1 hypothetical protein Ahy_B01g056953 isoform A [Arachis hypogaea]6.6e-4680.17Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEHKSLG
        DVAAI TSIQ +   G
Subjt:  DVAAIFTSIQEHKSLG

TrEMBL top hitse value%identityAlignment
A0A151RU61 Ubiquitin-conjugating enzyme E2 23.2e-4680.87Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEHKSL
        DVAAI TSIQ   S+
Subjt:  DVAAIFTSIQEHKSL

A0A445AZW7 UBC core domain-containing protein3.2e-4680.17Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEHKSLG
        DVAAI TSIQ +   G
Subjt:  DVAAIFTSIQEHKSLG

A0A4Y1QQU3 PREDICTED: ubiquitin-conjugating7.1e-4683.64Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ+NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

A0A4Y1RJ53 UBC core domain-containing protein4.2e-4675Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQEH-KSLGQHVLHVAKKRL
        DVAAI TSIQ+   +   H+ +  KK L
Subjt:  DVAAIFTSIQEH-KSLGQHVLHVAKKRL

M5XFH3 UBC core domain-containing protein7.1e-4683.64Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ+NNIMLWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

SwissProt top hitse value%identityAlignment
P25865 Ubiquitin-conjugating enzyme E2 12.1e-4781.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

P25866 Ubiquitin-conjugating enzyme E2 24.7e-4781.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAP  NNI LWN VIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

P35130 Ubiquitin-conjugating enzyme E2 28.1e-4780.91Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQ DPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

P42745 Ubiquitin-conjugating enzyme E2 22.1e-4781.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

P42746 Ubiquitin-conjugating enzyme E2 33.2e-4374.55Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        M+TPA+KRLM DFKRLQ+DPP GISGAPQ NNIM WN +IFGP+DTPWDGGTFKLTL FTEDYPNKPP VRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAA+ TSIQ
Subjt:  DVAAIFTSIQ

Arabidopsis top hitse value%identityAlignment
AT1G14400.1 ubiquitin carrier protein 11.5e-4881.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

AT1G14400.2 ubiquitin carrier protein 11.5e-4881.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

AT2G02760.1 ubiquiting-conjugating enzyme 21.5e-4881.82Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        MSTPARKRLMRDFKRLQQDPP GISGAPQ NNIMLWN VIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAAI TSIQ
Subjt:  DVAAIFTSIQ

AT4G27960.1 ubiquitin conjugating enzyme 96.6e-2039.05Show/hide
Query:  ARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKFT-------ISRNWSPIYDVAA
        A KR++++ K LQ+DPPT  S  P + ++  W   I GP D+P+ GG F +T+ F  DYP KPP V F +++FHPNI          +   WSP   ++ 
Subjt:  ARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKFT-------ISRNWSPIYDVAA

Query:  IFTSI
        +  SI
Subjt:  IFTSI

AT5G62540.1 ubiquitin-conjugating enzyme 32.3e-4474.55Show/hide
Query:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY
        M+TPA+KRLM DFKRLQ+DPP GISGAPQ NNIM WN +IFGP+DTPWDGGTFKLTL FTEDYPNKPP VRFVSRMFHPNI          +   WSPIY
Subjt:  MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKF-------TISRNWSPIY

Query:  DVAAIFTSIQ
        DVAA+ TSIQ
Subjt:  DVAAIFTSIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTACCGGCATTAGTGGTGCTCCCCAAAGCAATAATATCATGCTATGGAA
TGTTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACCGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGT
CTAGAATGTTCCACCCTAATATTAAGTTCACAATCTCAAGGAACTGGAGCCCAATCTATGATGTAGCAGCTATATTCACCTCTATTCAGGAACATAAGAGTCTTGGTCAG
CATGTGCTTCATGTGGCAAAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATGTTTGCAAACGTGGTTGGTGCACAGGT
GACTTCACAACTAAGAGATGCCAACTTGAGCATGGACACTTTAGCTGACAACCAATCAGCAGAGCAATCTCTGTCATACTATGCATTGCGTACTCTCAAAATGCACAGTA
GAGCCGTCTCTGCCATACGTGCACGTAGAGCTACCCTCAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTACCGGCATTAGTGGTGCTCCCCAAAGCAATAATATCATGCTATGGAA
TGTTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACCGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGT
CTAGAATGTTCCACCCTAATATTAAGTTCACAATCTCAAGGAACTGGAGCCCAATCTATGATGTAGCAGCTATATTCACCTCTATTCAGGAACATAAGAGTCTTGGTCAG
CATGTGCTTCATGTGGCAAAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATGTTTGCAAACGTGGTTGGTGCACAGGT
GACTTCACAACTAAGAGATGCCAACTTGAGCATGGACACTTTAGCTGACAACCAATCAGCAGAGCAATCTCTGTCATACTATGCATTGCGTACTCTCAAAATGCACAGTA
GAGCCGTCTCTGCCATACGTGCACGTAGAGCTACCCTCAAGGGCTAA
Protein sequenceShow/hide protein sequence
MSTPARKRLMRDFKRLQQDPPTGISGAPQSNNIMLWNVVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIKFTISRNWSPIYDVAAIFTSIQEHKSLGQ
HVLHVAKKRLDAMLYAGLTAKHKESATMFANVVGAQVTSQLRDANLSMDTLADNQSAEQSLSYYALRTLKMHSRAVSAIRARRATLKG