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Spg018422 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018422
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor MYB34
Genome locationscaffold3:12860100..12863311
RNA-Seq ExpressionSpg018422
SyntenySpg018422
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8491357.1 hypothetical protein CXB51_014478 [Gossypium anomalum]9.9e-0735.77Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        LL +DPEIERTFR+R+++  ++R E+      E++ +                           NG  +            +NPI IA+DR+RA+R Y +
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELK
        PVF  LNPGI  P I+A QFELK
Subjt:  PVFQTLNPGILEPPIDAPQFELK

XP_024033511.1 uncharacterized protein LOC112095639 [Citrus clementina]1.7e-0634.4Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        +   DPEIERT RR R+EQR  +     L      +E +     P++   +  + N   +GR+               P   N IY+A++R+RAIRDYV+
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELKEL
           Q ++PGI+ P +DA  FELK +
Subjt:  PVFQTLNPGILEPPIDAPQFELKEL

XP_030490806.1 uncharacterized protein LOC115707099 [Cannabis sativa]3.7e-0634.18Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        L  IDP+IE TFR+RRKEQ+ K+R                          VD        G E  G              + NPI +A+DR RAIR+Y  
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELKE-LSKRLESLERDSKGAKGSKEIMEEMMIDAKKWI
        P+F  LNPGI+ P I AP FELK  + + L++L+  S+ A   K     +   A+ W+
Subjt:  PVFQTLNPGILEPPIDAPQFELKE-LSKRLESLERDSKGAKGSKEIMEEMMIDAKKWI

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]7.6e-0739.02Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        L  IDPEIERTFR+RRKEQ+ K+R                                    G E  G           V  + NPI +A+DR RAIR+Y  
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELK
        P+F  LNPGI+ P I AP FELK
Subjt:  PVFQTLNPGILEPPIDAPQFELK

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]9.9e-0734.18Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        L  IDPEIERTFR+RRKEQ+ K+R                                    G E  G              + NPI +A+DR RAIR+Y  
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELKE-LSKRLESLERDSKGAKGSKEIMEEMMIDAKKWI
        P+F  LNPGI+ P I AP FELK  + + L++L+  S+ A   K     +   A+ W+
Subjt:  PVFQTLNPGILEPPIDAPQFELKE-LSKRLESLERDSKGAKGSKEIMEEMMIDAKKWI

TrEMBL top hitse value%identityAlignment
A0A2P5A9Q1 Uncharacterized protein1.5e-0535.77Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        L+ +DPE+ER FR RR+EQ      QQ L+  E + EA+          G D                              N   +A+DR+RAIR+Y +
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELK
        P+   LNPGI+ P I APQFELK
Subjt:  PVFQTLNPGILEPPIDAPQFELK

A0A6P4MQY3 uncharacterized protein LOC1084621751.2e-0538.74Show/hide
Query:  NPIYIAEDRNRAIRDYVLPVFQTLNPGILEPPIDAPQFELK-ELSKRLESLERDSKGAKGSKEIMEEMMIDAKKWIQGALFIGSEMRIPQSVPRPEDSRG
        NPI + +DR+RAIR YV+P+F  LNPGI  P I+APQFELK  + + L+++ + S   +   EI E   +DA          G+         RP  S+G
Subjt:  NPIYIAEDRNRAIRDYVLPVFQTLNPGILEPPIDAPQFELK-ELSKRLESLERDSKGAKGSKEIMEEMMIDAKKWIQGALFIGSEMRIPQSVPRPEDSRG

Query:  DPSGCPKAVRV
             PKA +V
Subjt:  DPSGCPKAVRV

A0A6P4PUC4 transcription factor MYB349.0e-0637.4Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        LL +DPEI+RTFR+RR+E+  +R+ + +L                            QN G ++NG           V Q   PI IA+DR+ AIR Y++
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELK
        P    LN GI  P I+APQFELK
Subjt:  PVFQTLNPGILEPPIDAPQFELK

A0A7J9NBM9 Uncharacterized protein5.3e-0634.4Show/hide
Query:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL
        LL IDPEIERTFR+RR++  RKR +                            ++N +N  + Q G                N I + +D+N AI  Y +
Subjt:  LLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVL

Query:  PVFQTLNPGILEPPIDAPQFELKEL
        P+F  LNP I+ P I+APQFELK +
Subjt:  PVFQTLNPGILEPPIDAPQFELKEL

U5CUI2 Retrotrans_gag domain-containing protein9.0e-0665.85Show/hide
Query:  NPIYIAEDRNRAIRDYVLPVFQTLNPGILEPPIDAPQFELK
        NPI +A+DR RAIR+Y  P+F  LNPGI+ P I APQFELK
Subjt:  NPIYIAEDRNRAIRDYVLPVFQTLNPGILEPPIDAPQFELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGGGGTGTCCACTCCTTGATATTGATCCTGAGATAGAAAGAACCTTTCGTCGTCGTAGGAAAGAGCAAAGACGAAAGAGAAGGGAACAACAAGAGTTGAGCGC
ACAGGAATCTCTAGAAGAAGCTTCTTACATACAAGAGTTTCCGATGGAACAACCTGGAGTCGATCCTCAAGTTAACCCACAGAACCATGGAAGGGAGCAAAATGGTGGAA
GAATCCCACCAGTACCTCCAGTTCCACCAGTGCCACAACAAGAAAATCCAATCTATATTGCTGAAGACCGCAATAGAGCAATAAGAGACTATGTTTTACCTGTTTTTCAG
ACTTTAAATCCAGGAATTTTGGAGCCACCGATAGACGCTCCACAGTTTGAACTAAAAGAACTCTCAAAAAGGCTAGAAAGCCTTGAGAGAGACTCCAAAGGAGCCAAAGG
AAGCAAGGAAATAATGGAAGAAATGATGATTGATGCTAAAAAATGGATCCAAGGGGCGCTATTTATAGGCTCGGAAATGAGGATCCCACAATCCGTTCCAAGGCCTGAGG
ATAGTAGAGGAGATCCAAGTGGTTGTCCAAAAGCCGTTCGTGTGAATTATAAAGCATCGGATTATACGAATTGGGAGCTTCAAGAGAAGAGTCCAAAGAAGGTTACACCT
GAACAACCACTTTTTATTGAACCCCTCAAAGTAGCTAGAATGCCACCGGATGTTTTCGAGGACATGATCTGCCAAGTCGTGGCACAAGCCCTTATTATTGCTGAAGGTTA
TAGGGTTGAGCAAGATGCATTGAGGGAGATTCAAGCTGAAAGAGAGATGGAAAATCAGACCTTTGAGCCACTACACAAGGCTCAAAGTGAGGCTGATTTGCTGCAAGGAA
GAGAAGAAGAGGCCCTTGAGGGGCCAAGTGAAGAAAACCAAGAAAAAGAGGAAGAGAATGAAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAAGAAGGCCAAGAG
AAGGCCAATGAAGAACAACCAGCTGACAAGACCTTGGATCCTCTGTTTGAATATGATGTGAGAGGACCTCCACTAGCAACTGAGAGCACCTCTTCGGGAGAGAAGAGGGA
TGAAGAAGAAATTGAAAATAAAGAGGCCGAAACCTCCAGTGATTCAGGAATAGAATCTGATTCAAATATCAAGGAATTGGATGACGACCAAATTCCTATCTCTGCAGCAT
TGAGGAAAAAGAGAAGAAGAGAGATTAGGACCGAGAGGAGGACCAAAAACAAGAATGACCCAATTTTTTCCAAGAGGCCGAGGACAAGGTCCTTGGACGTCTCTCCTGCA
GCTCCTCCAACCGTCCCACCTGCCAAGCCAAAAGCCAAATCCCCTAAGGCTCCACCTCCTAAAAATTCATTCCCAGAAGTCTTAAAAGATGTCAATTTTCAGGAACGGAT
GGAGATCATGAGAAAAAAAGATTTCCTCAACGATAAGGGATTCTCTAACAGAGCTGGGACACTGCCAGAGTTCGTAACCAGAGTTATCACACAGTATAAGTGGCAGGAGT
TCTGTGCTCACCCTCAGGAGGCCGTGGTGCCTTTTGTTCGAGAATTTTACTCCGGACTGAGGGAGGAGAGCATGAGTATGGCAGTGGTGAAGAGGCAAGATGGTCAGCTT
CTCTTCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGGGGTGTCCACTCCTTGATATTGATCCTGAGATAGAAAGAACCTTTCGTCGTCGTAGGAAAGAGCAAAGACGAAAGAGAAGGGAACAACAAGAGTTGAGCGC
ACAGGAATCTCTAGAAGAAGCTTCTTACATACAAGAGTTTCCGATGGAACAACCTGGAGTCGATCCTCAAGTTAACCCACAGAACCATGGAAGGGAGCAAAATGGTGGAA
GAATCCCACCAGTACCTCCAGTTCCACCAGTGCCACAACAAGAAAATCCAATCTATATTGCTGAAGACCGCAATAGAGCAATAAGAGACTATGTTTTACCTGTTTTTCAG
ACTTTAAATCCAGGAATTTTGGAGCCACCGATAGACGCTCCACAGTTTGAACTAAAAGAACTCTCAAAAAGGCTAGAAAGCCTTGAGAGAGACTCCAAAGGAGCCAAAGG
AAGCAAGGAAATAATGGAAGAAATGATGATTGATGCTAAAAAATGGATCCAAGGGGCGCTATTTATAGGCTCGGAAATGAGGATCCCACAATCCGTTCCAAGGCCTGAGG
ATAGTAGAGGAGATCCAAGTGGTTGTCCAAAAGCCGTTCGTGTGAATTATAAAGCATCGGATTATACGAATTGGGAGCTTCAAGAGAAGAGTCCAAAGAAGGTTACACCT
GAACAACCACTTTTTATTGAACCCCTCAAAGTAGCTAGAATGCCACCGGATGTTTTCGAGGACATGATCTGCCAAGTCGTGGCACAAGCCCTTATTATTGCTGAAGGTTA
TAGGGTTGAGCAAGATGCATTGAGGGAGATTCAAGCTGAAAGAGAGATGGAAAATCAGACCTTTGAGCCACTACACAAGGCTCAAAGTGAGGCTGATTTGCTGCAAGGAA
GAGAAGAAGAGGCCCTTGAGGGGCCAAGTGAAGAAAACCAAGAAAAAGAGGAAGAGAATGAAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAAGAAGGCCAAGAG
AAGGCCAATGAAGAACAACCAGCTGACAAGACCTTGGATCCTCTGTTTGAATATGATGTGAGAGGACCTCCACTAGCAACTGAGAGCACCTCTTCGGGAGAGAAGAGGGA
TGAAGAAGAAATTGAAAATAAAGAGGCCGAAACCTCCAGTGATTCAGGAATAGAATCTGATTCAAATATCAAGGAATTGGATGACGACCAAATTCCTATCTCTGCAGCAT
TGAGGAAAAAGAGAAGAAGAGAGATTAGGACCGAGAGGAGGACCAAAAACAAGAATGACCCAATTTTTTCCAAGAGGCCGAGGACAAGGTCCTTGGACGTCTCTCCTGCA
GCTCCTCCAACCGTCCCACCTGCCAAGCCAAAAGCCAAATCCCCTAAGGCTCCACCTCCTAAAAATTCATTCCCAGAAGTCTTAAAAGATGTCAATTTTCAGGAACGGAT
GGAGATCATGAGAAAAAAAGATTTCCTCAACGATAAGGGATTCTCTAACAGAGCTGGGACACTGCCAGAGTTCGTAACCAGAGTTATCACACAGTATAAGTGGCAGGAGT
TCTGTGCTCACCCTCAGGAGGCCGTGGTGCCTTTTGTTCGAGAATTTTACTCCGGACTGAGGGAGGAGAGCATGAGTATGGCAGTGGTGAAGAGGCAAGATGGTCAGCTT
CTCTTCTGTTGA
Protein sequenceShow/hide protein sequence
MNKGCPLLDIDPEIERTFRRRRKEQRRKRREQQELSAQESLEEASYIQEFPMEQPGVDPQVNPQNHGREQNGGRIPPVPPVPPVPQQENPIYIAEDRNRAIRDYVLPVFQ
TLNPGILEPPIDAPQFELKELSKRLESLERDSKGAKGSKEIMEEMMIDAKKWIQGALFIGSEMRIPQSVPRPEDSRGDPSGCPKAVRVNYKASDYTNWELQEKSPKKVTP
EQPLFIEPLKVARMPPDVFEDMICQVVAQALIIAEGYRVEQDALREIQAEREMENQTFEPLHKAQSEADLLQGREEEALEGPSEENQEKEEENEGQNATAFGPHSEEGQE
KANEEQPADKTLDPLFEYDVRGPPLATESTSSGEKRDEEEIENKEAETSSDSGIESDSNIKELDDDQIPISAALRKKRRREIRTERRTKNKNDPIFSKRPRTRSLDVSPA
APPTVPPAKPKAKSPKAPPPKNSFPEVLKDVNFQERMEIMRKKDFLNDKGFSNRAGTLPEFVTRVITQYKWQEFCAHPQEAVVPFVREFYSGLREESMSMAVVKRQDGQL
LFC