; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018456 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018456
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold3:15773250..15773876
RNA-Seq ExpressionSpg018456
SyntenySpg018456
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.2e-1032.82Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ-----------------RVKIVPGKDEERPSPSSRALAIAYR
        +PT+ DST+S +R+ +LYC+++G +INVG +I  EI  C  +  GKLFF  LIT+ C+                  V   P +  +R +PS+   + +  
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ-----------------RVKIVPGKDEERPSPSSRALAIAYR

Query:  QLD-----------QIRENLKTYWAYAKERD
         +D           Q+ E L+T+W Y +ERD
Subjt:  QLD-----------QIRENLKTYWAYAKERD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-1030.35Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV--------------------------PGKDEERPSPS
        +PTT   T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+  +                            P +  ++PS S
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV--------------------------PGKDEERPSPS

Query:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE
          A A + R    I + LK                             +WAY+KERD A+++   +      P FP FPQ +L    KD D E E   D+
Subjt:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE

Query:  D
        D
Subjt:  D

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]7.9e-1031.07Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEER--------------------------PSPS
        +PTT   T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+                          PS S
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEER--------------------------PSPS

Query:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE
           +A + R    I + LK                             +WAY+KERD A+++   +      P FP FPQ LL  +D D + E E + D 
Subjt:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE

Query:  DDEEKE
         +E  E
Subjt:  DDEEKE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.9e-1030.57Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV------------------------PGKDEERPSPSSR
        +PTT    +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+    +                        P +  ++PS S  
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV------------------------PGKDEERPSPSSR

Query:  ALAIAYRQLDQIRENLKT-----------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKE
        A A + R    + + LK                  +WAY+KERD A+++   +      P FP FPQ +L  +D D + E E + D  +E  E
Subjt:  ALAIAYRQLDQIRENLKT-----------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]3.3e-0838.2Show/hide
Query:  PTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSPSSRALAIAYRQLDQIRE
        PTT DS+ISV++++LLYC++ G  INVG ++   IL C ++R GKLFF SLI +L  +  +    D+           I  + + ++RE
Subjt:  PTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSPSSRALAIAYRQLDQIRE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.9e-1130.35Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV--------------------------PGKDEERPSPS
        +PTT   T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+  +                            P +  ++PS S
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV--------------------------PGKDEERPSPS

Query:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE
          A A + R    I + LK                             +WAY+KERD A+++   +      P FP FPQ +L    KD D E E   D+
Subjt:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE

Query:  D
        D
Subjt:  D

A0A2P5CEY2 Uncharacterized protein3.8e-1031.07Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEER--------------------------PSPS
        +PTT   T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+                          PS S
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEER--------------------------PSPS

Query:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE
           +A + R    I + LK                             +WAY+KERD A+++   +      P FP FPQ LL  +D D + E E + D 
Subjt:  SRALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDE

Query:  DDEEKE
         +E  E
Subjt:  DDEEKE

A0A2P5DXM3 Uncharacterized protein3.8e-1030.57Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV------------------------PGKDEERPSPSSR
        +PTT    +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+    +                        P +  ++PS S  
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIV------------------------PGKDEERPSPSSR

Query:  ALAIAYRQLDQIRENLKT-----------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKE
        A A + R    + + LK                  +WAY+KERD A+++   +      P FP FPQ +L  +D D + E E + D  +E  E
Subjt:  ALAIAYRQLDQIRENLKT-----------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKE

A0A7J6FZ22 Uncharacterized protein5.9e-1132.82Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ-----------------RVKIVPGKDEERPSPSSRALAIAYR
        +PT+ DST+S +R+ +LYC+++G +INVG +I  EI  C  +  GKLFF  LIT+ C+                  V   P +  +R +PS+   + +  
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ-----------------RVKIVPGKDEERPSPSSRALAIAYR

Query:  QLD-----------QIRENLKTYWAYAKERD
         +D           Q+ E L+T+W Y +ERD
Subjt:  QLD-----------QIRENLKTYWAYAKERD

A0A803Q715 Uncharacterized protein4.2e-0946.58Show/hide
Query:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSP
        +PT+ DST+S +R+ +LYC+++G +INVG +I  EI  C  +  GKLFF  LIT+ C R   VP  ++E P P
Subjt:  MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCGACGACAGCACGATTTCAGTGGATAGAGTAATGCTACTCTATTGCCTTATGGAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGGCCTTCACCAT
CATCAAGAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAGACATATTGGGCGTATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTAT
CTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGAAGAAAATGATGATGAAGA
TGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCGACGACAGCACGATTTCAGTGGATAGAGTAATGCTACTCTATTGCCTTATGGAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGGCCTTCACCAT
CATCAAGAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAGACATATTGGGCGTATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTAT
CTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGAAGAAAATGATGATGAAGA
TGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG
Protein sequenceShow/hide protein sequence
MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSPSSRALAIAYRQLDQIRENLKTYWAYAKERDEAIREFY
LSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKESSSNED