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Spg018512 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018512
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold3:11214077..11220729
RNA-Seq ExpressionSpg018512
SyntenySpg018512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-1228.97Show/hide
Query:  SKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW------------
        +++ L      V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+ L  ++L   SI+VG++I  EI               
Subjt:  SKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW------------

Query:  ----------VPESAEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWN
                   P    +  L + G ID   +AR+      + TQ+            R  G +    + LEQ       Q++          +Q   FW 
Subjt:  ----------VPESAEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWN

Query:  YVKRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE
        Y K RD AL+KALQ NF++P   FP FP ++L         E E D D   E
Subjt:  YVKRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.3e-1030.59Show/hide
Query:  LKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW----------------------VPESAEDVILLDKGIIDTPNLAR
        L   A  W  F+K RLLPTTH  TVS++R+ L +++L   SI+VG++I  EI                          P    +  L   G ID   +AR
Subjt:  LKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW----------------------VPESAEDVILLDKGIIDTPNLAR

Query:  L------QRTQE-----------ARQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYTAFPLFPDDLLN
        +      + TQ+           +R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P   FP FP +LL 
Subjt:  L------QRTQE-----------ARQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYTAFPLFPDDLLN

Query:  PWIPPPPVEREEDDDAGQE
                E E D D   E
Subjt:  PWIPPPPVEREEDDDAGQE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.2e-1430.4Show/hide
Query:  HASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW-
        H+ + E    P   +L      V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+ L  ++L   SI+VG++I  EI    
Subjt:  HASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW-

Query:  -------------------VPESAEDVILLDKGIIDTPNLARL--------------QRTQEARQGGLVCGVHQILEQLARSASRQEFAERQAHTFWNYV
                            P    +  L + G ID   +AR+               R   A        V Q L+ L +  S+QE   +Q   FW Y 
Subjt:  -------------------VPESAEDVILLDKGIIDTPNLARL--------------QRTQEARQGGLVCGVHQILEQLARSASRQEFAERQAHTFWNYV

Query:  KRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE
        K RD AL+KALQ NF++P   FP FP ++L         E E D D   E
Subjt:  KRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.3e-1027.56Show/hide
Query:  SHASYNEIAVAPSKEQLNAAAREVGIEGAQWRL-SKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKII------
        +   +  ++ + S  +L    RE+G  G +W   S    RT++A+ LK  AN W+ FI+  L PTTHDS++S E++ L + ++   +I+VGK++      
Subjt:  SHASYNEIAVAPSKEQLNAAAREVGIEGAQWRL-SKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKII------

Query:  -----VGEIF-----------GWVPESAEDVILL---DKGIIDTPNLARLQRTQEARQGGLVCGVHQILEQ-LARSASRQEFAERQAHTFWNYVKRRDAA
              G++F             VPE  +D+++    +K  ID   +++L+   E  +G  + GV + +E+ L +S S  +F   Q       +K   A 
Subjt:  -----VGEIF-----------GWVPESAEDVILL---DKGIIDTPNLARLQRTQEARQGGLVCGVHQILEQ-LARSASRQEFAERQAHTFWNYVKRRDAA

Query:  LRKALQANFSKPYTAFPLFPDDLLN
        L   L+A+  K    F    +DL N
Subjt:  LRKALQANFSKPYTAFPLFPDDLLN

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.2e-0937.25Show/hide
Query:  YKLQDFSHASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIV
        YK++D   AS N+I   P +E++  A R +   G QW +S    +T  ++ L  EA  W+  +K+R++PT+HD TVSR+RV  A+ I   + IDV  +I 
Subjt:  YKLQDFSHASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIV

Query:  GE
         +
Subjt:  GE

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein1.8e-0836.21Show/hide
Query:  VPSIRYKLQDFSHASYNEIAVAPSKE------------QLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPL
        V  +R K   F   + NE+   P+ E              N     + IEGAQW+ S  E  +F+ + +KKE   W+ F+  RLLP+TH S V+++R  L
Subjt:  VPSIRYKLQDFSHASYNEIAVAPSKE------------QLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPL

Query:  AFAILRSLSIDVGKII
         +AI+   SIDVGK+I
Subjt:  AFAILRSLSIDVGKII

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1228.97Show/hide
Query:  SKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW------------
        +++ L      V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+ L  ++L   SI+VG++I  EI               
Subjt:  SKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW------------

Query:  ----------VPESAEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWN
                   P    +  L + G ID   +AR+      + TQ+            R  G +    + LEQ       Q++          +Q   FW 
Subjt:  ----------VPESAEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWN

Query:  YVKRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE
        Y K RD AL+KALQ NF++P   FP FP ++L         E E D D   E
Subjt:  YVKRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE

A0A2P5CEY2 Uncharacterized protein1.1e-1030.59Show/hide
Query:  LKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW----------------------VPESAEDVILLDKGIIDTPNLAR
        L   A  W  F+K RLLPTTH  TVS++R+ L +++L   SI+VG++I  EI                          P    +  L   G ID   +AR
Subjt:  LKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW----------------------VPESAEDVILLDKGIIDTPNLAR

Query:  L------QRTQE-----------ARQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYTAFPLFPDDLLN
        +      + TQ+           +R  G +    + LEQ       Q++          +Q   FW Y K RD AL+KALQ NF++P   FP FP +LL 
Subjt:  L------QRTQE-----------ARQGGLVCGVHQILEQLARSASRQEF--------AERQAHTFWNYVKRRDAALRKALQANFSKPYTAFPLFPDDLLN

Query:  PWIPPPPVEREEDDDAGQE
                E E D D   E
Subjt:  PWIPPPPVEREEDDDAGQE

A0A2P5DXM3 Uncharacterized protein5.8e-1530.4Show/hide
Query:  HASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW-
        H+ + E    P   +L      V   GA+W +S     T   + L   A  W  F+K RLLPTTH   VS++R+ L  ++L   SI+VG++I  EI    
Subjt:  HASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGW-

Query:  -------------------VPESAEDVILLDKGIIDTPNLARL--------------QRTQEARQGGLVCGVHQILEQLARSASRQEFAERQAHTFWNYV
                            P    +  L + G ID   +AR+               R   A        V Q L+ L +  S+QE   +Q   FW Y 
Subjt:  -------------------VPESAEDVILLDKGIIDTPNLARL--------------QRTQEARQGGLVCGVHQILEQLARSASRQEFAERQAHTFWNYV

Query:  KRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE
        K RD AL+KALQ NF++P   FP FP ++L         E E D D   E
Subjt:  KRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQE

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I5.2e-0830.29Show/hide
Query:  QWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGWV--PESAEDVILLDKGIIDTPNLARLQRT
        QW   +  +RT     L+  A  W  F+K +LLPT+H++TVS +R+    +I+   SID+ KIIV ++   +  P SA   I +  G+ +     + + T
Subjt:  QWRLSKTEKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGWV--PESAEDVILLDKGIIDTPNLARLQRT

Query:  QEARQGGLVCGVHQILEQLARSASRQ-EFAERQAHTFWNYVKRRDAALRKALQANFSKPYTAF--PLFPDDLLNP
          A           +LE++ +    Q E    +  T+++Y KRRD  L          P+T F  P+FP  LL P
Subjt:  QEARQGGLVCGVHQILEQLARSASRQ-EFAERQAHTFWNYVKRRDAALRKALQANFSKPYTAF--PLFPDDLLNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCCGCAATTCTGCCCTATGCTTAATAAGGAAAATTTCAAAGGCAGAATTTTGATCAAGAAAACTTACATGAGTGCAGAAAACACACTGCACAATGCTCCGAAACA
GAATTACTTGATCTCCCAATGGACACCACCACACGAGAACACCCGCTACACTCTTGGATTACCTCAAGATCGTGATTGTGGGATCGCTACCGTCTTTACCACTGATCCCT
CTAATGAACAAGTTGTTATGGGTCCAACCACTAAACAGGAGCTTCTCTCGGGCCAGGAGAGGACAGTGCGCCTTTGTGTGAGTTTGGTGCATGAGCTATCTGCCTGGGAT
GAGCAGCCGCCAGCTGTGGAGCCTGCTGCAGTGGTGAACCAAGTTACAGAGGAATCATGTGTTTATTGTGGTGAAGAGCATAACTACGAGTTTTGCCCCAACAATCCAGC
TTCTGAAAAAGGAAAAGATTCTGAGAAGATTGACGGAACAGAGCAAGAGAGTCAAGAAAAGGCAGCAATGGATTTTCCAAGGCAAGGTACTAATGAGACAGAGGTTCAGG
AGATTCTGGAAGAAATAGTGAAGGATCTGCCACGCCGTCGTCAATCTGAAAATCAAGAAGAAGTCAAAAAGAAGACTGCAGAAGATGAAACTAAGAAGAAAAATGGTGAG
GATAAGAGCAAAGGCATTGCAGGAACAAATGTTGAAACAGAAGTGGCTCGCCCAGAAGAAAGGAGGTTGCCTTATGAGCGATTTGTCAATCATTTTGCTAGGGCAAAATA
TATTGACATGTTGAAGAGGGACTTTCTGTTCGAGAGAGGATTCAGTGGTGATCTTCTGCACTTTCTGAGGGCAGTCTTGGTGCCATCAATTCGCTACAAACTTCAAGACT
TCTCGCACGCTAGTTACAACGAGATAGCGGTAGCACCATCTAAGGAGCAGTTGAATGCTGCTGCTCGGGAAGTTGGAATAGAAGGTGCACAGTGGCGACTATCGAAAACC
GAGAAGAGGACTTTTCAGGCGGCTTATTTAAAGAAGGAAGCAAATACTTGGATGGGGTTTATCAAACAAAGACTGCTTCCAACGACTCATGACTCCACGGTCTCGCGGGA
AAGAGTTCCTCTAGCTTTTGCAATATTACGGTCTCTTAGCATCGATGTAGGAAAAATTATAGTTGGTGAAATTTTTGGATGGGTTCCAGAGAGTGCAGAGGACGTGATCC
TACTAGATAAGGGAATAATAGACACACCTAACTTGGCACGGCTGCAGAGAACGCAAGAGGCACGTCAAGGGGGGCTAGTCTGTGGCGTTCACCAGATCTTAGAACAGCTT
GCACGTTCAGCTAGCAGGCAAGAGTTCGCCGAAAGGCAGGCTCATACATTCTGGAATTATGTTAAGAGACGTGATGCCGCATTGAGGAAGGCACTTCAAGCTAATTTTTC
CAAGCCCTATACAGCCTTCCCCTTATTTCCTGATGATTTACTGAACCCCTGGATCCCACCACCACCTGTTGAGAGAGAAGAAGATGATGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCCCGCAATTCTGCCCTATGCTTAATAAGGAAAATTTCAAAGGCAGAATTTTGATCAAGAAAACTTACATGAGTGCAGAAAACACACTGCACAATGCTCCGAAACA
GAATTACTTGATCTCCCAATGGACACCACCACACGAGAACACCCGCTACACTCTTGGATTACCTCAAGATCGTGATTGTGGGATCGCTACCGTCTTTACCACTGATCCCT
CTAATGAACAAGTTGTTATGGGTCCAACCACTAAACAGGAGCTTCTCTCGGGCCAGGAGAGGACAGTGCGCCTTTGTGTGAGTTTGGTGCATGAGCTATCTGCCTGGGAT
GAGCAGCCGCCAGCTGTGGAGCCTGCTGCAGTGGTGAACCAAGTTACAGAGGAATCATGTGTTTATTGTGGTGAAGAGCATAACTACGAGTTTTGCCCCAACAATCCAGC
TTCTGAAAAAGGAAAAGATTCTGAGAAGATTGACGGAACAGAGCAAGAGAGTCAAGAAAAGGCAGCAATGGATTTTCCAAGGCAAGGTACTAATGAGACAGAGGTTCAGG
AGATTCTGGAAGAAATAGTGAAGGATCTGCCACGCCGTCGTCAATCTGAAAATCAAGAAGAAGTCAAAAAGAAGACTGCAGAAGATGAAACTAAGAAGAAAAATGGTGAG
GATAAGAGCAAAGGCATTGCAGGAACAAATGTTGAAACAGAAGTGGCTCGCCCAGAAGAAAGGAGGTTGCCTTATGAGCGATTTGTCAATCATTTTGCTAGGGCAAAATA
TATTGACATGTTGAAGAGGGACTTTCTGTTCGAGAGAGGATTCAGTGGTGATCTTCTGCACTTTCTGAGGGCAGTCTTGGTGCCATCAATTCGCTACAAACTTCAAGACT
TCTCGCACGCTAGTTACAACGAGATAGCGGTAGCACCATCTAAGGAGCAGTTGAATGCTGCTGCTCGGGAAGTTGGAATAGAAGGTGCACAGTGGCGACTATCGAAAACC
GAGAAGAGGACTTTTCAGGCGGCTTATTTAAAGAAGGAAGCAAATACTTGGATGGGGTTTATCAAACAAAGACTGCTTCCAACGACTCATGACTCCACGGTCTCGCGGGA
AAGAGTTCCTCTAGCTTTTGCAATATTACGGTCTCTTAGCATCGATGTAGGAAAAATTATAGTTGGTGAAATTTTTGGATGGGTTCCAGAGAGTGCAGAGGACGTGATCC
TACTAGATAAGGGAATAATAGACACACCTAACTTGGCACGGCTGCAGAGAACGCAAGAGGCACGTCAAGGGGGGCTAGTCTGTGGCGTTCACCAGATCTTAGAACAGCTT
GCACGTTCAGCTAGCAGGCAAGAGTTCGCCGAAAGGCAGGCTCATACATTCTGGAATTATGTTAAGAGACGTGATGCCGCATTGAGGAAGGCACTTCAAGCTAATTTTTC
CAAGCCCTATACAGCCTTCCCCTTATTTCCTGATGATTTACTGAACCCCTGGATCCCACCACCACCTGTTGAGAGAGAAGAAGATGATGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MRPQFCPMLNKENFKGRILIKKTYMSAENTLHNAPKQNYLISQWTPPHENTRYTLGLPQDRDCGIATVFTTDPSNEQVVMGPTTKQELLSGQERTVRLCVSLVHELSAWD
EQPPAVEPAAVVNQVTEESCVYCGEEHNYEFCPNNPASEKGKDSEKIDGTEQESQEKAAMDFPRQGTNETEVQEILEEIVKDLPRRRQSENQEEVKKKTAEDETKKKNGE
DKSKGIAGTNVETEVARPEERRLPYERFVNHFARAKYIDMLKRDFLFERGFSGDLLHFLRAVLVPSIRYKLQDFSHASYNEIAVAPSKEQLNAAAREVGIEGAQWRLSKT
EKRTFQAAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVPLAFAILRSLSIDVGKIIVGEIFGWVPESAEDVILLDKGIIDTPNLARLQRTQEARQGGLVCGVHQILEQL
ARSASRQEFAERQAHTFWNYVKRRDAALRKALQANFSKPYTAFPLFPDDLLNPWIPPPPVEREEDDDAGQED