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Spg018521 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018521
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationscaffold3:10319242..10324289
RNA-Seq ExpressionSpg018521
SyntenySpg018521
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041553.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa]7.7e-1645.53Show/hide
Query:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG
        E EAEKKRA ELI+A  D RKN  F W+E  EGMRLEEL++FR AL+DLR KV E+  ++        ++                  P   S SFHLAG
Subjt:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG

Query:  NHHQCLSSMTFYVAGNHHVTMGL
        NH Q      F++AGNH V  GL
Subjt:  NHHQCLSSMTFYVAGNHHVTMGL

XP_004147877.3 agamous-like MADS-box protein AGL62 [Cucumis sativus]6.6e-1544.7Show/hide
Query:  ASCALMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHP-
        A CAL  E EAEKKRA ELI+A  D RKN  F W+E VEG+RLEEL++FR AL+DLR KV E+  ++         V +    +        +  P  P 
Subjt:  ASCALMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHP-

Query:  -SMSFHLAGNHHQCLSSMTFYVAGNHHVTMGL
         S SFHL GNH +      F++AGN  V  GL
Subjt:  -SMSFHLAGNHHQCLSSMTFYVAGNHHVTMGL

XP_008466532.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]7.7e-1645.53Show/hide
Query:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG
        E EAEKKRA ELI+A  D RKN  F W+E  EGMRLEEL++FR AL+DLR KV E+  ++        ++                  P   S SFHLAG
Subjt:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG

Query:  NHHQCLSSMTFYVAGNHHVTMGL
        NH Q      F++AGNH V  GL
Subjt:  NHHQCLSSMTFYVAGNHHVTMGL

XP_023006252.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]4.4e-1147.22Show/hide
Query:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSM--S
        L+ E EAEKKRA ELI+A  + R +  F WEE VEGMRLEEL+EFR +L+DLR KV EK  ++         V +    +        +  P  P M  S
Subjt:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSM--S

Query:  FHLAGNHH
        FHLAGNHH
Subjt:  FHLAGNHH

XP_038875004.1 agamous-like MADS-box protein AGL62 [Benincasa hispida]1.8e-1242.06Show/hide
Query:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREID----GGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSF
        E E EKKRAT+LI+A  D RKN  F W+E VEGMRL+EL+ FR AL+DLR +V E+  ++     GGL    +     S                 S SF
Subjt:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREID----GGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSF

Query:  HLAGNHHQCLSSMTFYVAGNHHVTMG
        HLAGN         F +AGNH    G
Subjt:  HLAGNHHQCLSSMTFYVAGNHHVTMG

TrEMBL top hitse value%identityAlignment
A0A0A0LE01 MADS-box domain-containing protein3.2e-1544.7Show/hide
Query:  ASCALMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHP-
        A CAL  E EAEKKRA ELI+A  D RKN  F W+E VEG+RLEEL++FR AL+DLR KV E+  ++         V +    +        +  P  P 
Subjt:  ASCALMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHP-

Query:  -SMSFHLAGNHHQCLSSMTFYVAGNHHVTMGL
         S SFHL GNH +      F++AGN  V  GL
Subjt:  -SMSFHLAGNHHQCLSSMTFYVAGNHHVTMGL

A0A1S3CRI8 agamous-like MADS-box protein AGL623.8e-1645.53Show/hide
Query:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG
        E EAEKKRA ELI+A  D RKN  F W+E  EGMRLEEL++FR AL+DLR KV E+  ++        ++                  P   S SFHLAG
Subjt:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG

Query:  NHHQCLSSMTFYVAGNHHVTMGL
        NH Q      F++AGNH V  GL
Subjt:  NHHQCLSSMTFYVAGNHHVTMGL

A0A5D3D807 Agamous-like MADS-box protein AGL623.8e-1645.53Show/hide
Query:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG
        E EAEKKRA ELI+A  D RKN  F W+E  EGMRLEEL++FR AL+DLR KV E+  ++        ++                  P   S SFHLAG
Subjt:  ELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAG

Query:  NHHQCLSSMTFYVAGNHHVTMGL
        NH Q      F++AGNH V  GL
Subjt:  NHHQCLSSMTFYVAGNHHVTMGL

A0A6J1H4M6 agamous-like MADS-box protein AGL623.6e-1146.73Show/hide
Query:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDG-GLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSF
        L+ E EAEKKRA ELI+A  + R +  F WEE VEGMRLEEL+EFR +L+DLR KV EK  ++    +   ++ A+                P  P  SF
Subjt:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDG-GLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSF

Query:  HLAGNHH
        HLAGNHH
Subjt:  HLAGNHH

A0A6J1KVC9 agamous-like MADS-box protein AGL622.1e-1147.22Show/hide
Query:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSM--S
        L+ E EAEKKRA ELI+A  + R +  F WEE VEGMRLEEL+EFR +L+DLR KV EK  ++         V +    +        +  P  P M  S
Subjt:  LMAELEAEKKRATELIKAVGDLRKNDEFCWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSM--S

Query:  FHLAGNHH
        FHLAGNHH
Subjt:  FHLAGNHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACCAAATTAGGAAACTACTTGGAGATCAAGCTGGCGGACAACGTCGTGATGCTAGCCCACAACGTTACGACGCTAGGGCAATCCGAGAGCAATTTTCCATATCT
GAAGGGACAACATCGCGACGCTATCCACAACCTGACTGGGCAACCTGCTTGGATGCAACTTGCTTTGCTTTTAAAGGAAAACGATGTGATCCTGAATCGTTCATGCAAAG
ACATGCGAGTTGGGGCATCCTGTGCATTGATGGCGGAACTGGAGGCAGAGAAGAAGCGAGCGACTGAGTTAATCAAGGCAGTAGGGGATTTAAGGAAGAACGATGAATTT
TGTTGGGAGGAAACAGTGGAAGGGATGAGATTGGAGGAATTGAGGGAGTTTCGATTGGCATTGATAGATTTGAGAGGAAAAGTGCCAGAGAAGTATCGAGAAATTGACGG
GGGTCTGAATCAGAGGGTCATTGTTGCCGTCGCTGCCTCCACCGTCGACTGCTCCGTTGGTGCGTGGTATATTTTTTACCCTTATCATCCGTCAATGTCGTTTCACCTTG
CAGGAAACCACCACCAATGTCTGTCTTCGATGACGTTTTATGTTGCTGGAAACCACCATGTCACGATGGGGTTATGTATGTATGTTTGTATGTATGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAACCAAATTAGGAAACTACTTGGAGATCAAGCTGGCGGACAACGTCGTGATGCTAGCCCACAACGTTACGACGCTAGGGCAATCCGAGAGCAATTTTCCATATCT
GAAGGGACAACATCGCGACGCTATCCACAACCTGACTGGGCAACCTGCTTGGATGCAACTTGCTTTGCTTTTAAAGGAAAACGATGTGATCCTGAATCGTTCATGCAAAG
ACATGCGAGTTGGGGCATCCTGTGCATTGATGGCGGAACTGGAGGCAGAGAAGAAGCGAGCGACTGAGTTAATCAAGGCAGTAGGGGATTTAAGGAAGAACGATGAATTT
TGTTGGGAGGAAACAGTGGAAGGGATGAGATTGGAGGAATTGAGGGAGTTTCGATTGGCATTGATAGATTTGAGAGGAAAAGTGCCAGAGAAGTATCGAGAAATTGACGG
GGGTCTGAATCAGAGGGTCATTGTTGCCGTCGCTGCCTCCACCGTCGACTGCTCCGTTGGTGCGTGGTATATTTTTTACCCTTATCATCCGTCAATGTCGTTTCACCTTG
CAGGAAACCACCACCAATGTCTGTCTTCGATGACGTTTTATGTTGCTGGAAACCACCATGTCACGATGGGGTTATGTATGTATGTTTGTATGTATGTATGA
Protein sequenceShow/hide protein sequence
MLTKLGNYLEIKLADNVVMLAHNVTTLGQSESNFPYLKGQHRDAIHNLTGQPAWMQLALLLKENDVILNRSCKDMRVGASCALMAELEAEKKRATELIKAVGDLRKNDEF
CWEETVEGMRLEELREFRLALIDLRGKVPEKYREIDGGLNQRVIVAVAASTVDCSVGAWYIFYPYHPSMSFHLAGNHHQCLSSMTFYVAGNHHVTMGLCMYVCMYV