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Spg018526 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018526
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:9992927..9993265
RNA-Seq ExpressionSpg018526
SyntenySpg018526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0455.56Show/hide
Query:  MATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDD
        MA   A+++L L+ SN    ASLS  N GN+T A A S WCD RTEECL G+DD
Subjt:  MATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDD

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0430.33Show/hide
Query:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESA-------------FPSLQARNPRATDGTRRRGKPACGRPNGGR
        +  MA  +L  S +   ++  L+P  + +  +   A+ WCDGR E CL G+ + +S              F S Q  N   T+   ++  P C RP   R
Subjt:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESA-------------FPSLQARNPRATDGTRRRGKPACGRPNGGR

Query:  YYDCTGKGRVIPIPQRCDTYTR
        Y  C G+  +IP P+ CDT  R
Subjt:  YYDCTGKGRVIPIPQRCDTYTR

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2057.14Show/hide
Query:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESAFPSLQARNPR-ATDGTRRRGKPACGRPNGGRYYDCTGKGRVIP
        A AM V ILMLSGS+C  VAS +P + GN TVAAAASMWCDGR EEC+  EDDGESAFPSL A  P+  +  TR R KP C RP  G Y  C    R   
Subjt:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESAFPSLQARNPR-ATDGTRRRGKPACGRPNGGRYYDCTGKGRVIP

Query:  IPQRCDTYTRNC
            C TY R C
Subjt:  IPQRCDTYTRNC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1650Show/hide
Query:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESAFPSLQARNPR-ATDGTRRRGKPACGRPNGGRYYDCTGKGRVIP
        A AM V IL+LSGS+C  VAS +P + GN TVAAAASMWCDGR EEC+  E D  SAFPSLQ    +  +  +    K  C RP+   Y  C    R  P
Subjt:  ATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESAFPSLQARNPR-ATDGTRRRGKPACGRPNGGRYYDCTGKGRVIP

Query:  IPQRCDTYTRNC
         P  C  YTR C
Subjt:  IPQRCDTYTRNC

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGGCAATGGCAGTCCTGATATTGATGCTGAGTGGAAGCAATTGTAAGGTCGTTGCTTCTCTAAGTCCTTTCAATGTCGGCAACCAGACCGTCGCCGCTGCGGC
GTCCATGTGGTGCGATGGCCGCACAGAAGAATGCCTGGCCGGAGAAGACGACGGTGAGTCGGCATTTCCAAGCTTGCAAGCCAGGAATCCTAGGGCTACTGACGGGACGA
GAAGACGGGGAAAACCTGCATGTGGTCGGCCGAATGGAGGAAGATATTATGACTGTACCGGCAAAGGACGAGTAATTCCCATTCCCCAACGCTGTGACACATATACTCGC
AACTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGGCAATGGCAGTCCTGATATTGATGCTGAGTGGAAGCAATTGTAAGGTCGTTGCTTCTCTAAGTCCTTTCAATGTCGGCAACCAGACCGTCGCCGCTGCGGC
GTCCATGTGGTGCGATGGCCGCACAGAAGAATGCCTGGCCGGAGAAGACGACGGTGAGTCGGCATTTCCAAGCTTGCAAGCCAGGAATCCTAGGGCTACTGACGGGACGA
GAAGACGGGGAAAACCTGCATGTGGTCGGCCGAATGGAGGAAGATATTATGACTGTACCGGCAAAGGACGAGTAATTCCCATTCCCCAACGCTGTGACACATATACTCGC
AACTGTTAA
Protein sequenceShow/hide protein sequence
MATAMAVLILMLSGSNCKVVASLSPFNVGNQTVAAAASMWCDGRTEECLAGEDDGESAFPSLQARNPRATDGTRRRGKPACGRPNGGRYYDCTGKGRVIPIPQRCDTYTR
NC