; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg018527 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg018527
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationscaffold3:11511273..11514191
RNA-Seq ExpressionSpg018527
SyntenySpg018527
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]6.4e-9697.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TYK23826.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]3.2e-9596.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]8.4e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]1.9e-9596.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRG QKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]2.4e-9596.17Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMN+KDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein4.1e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X13.1e-9697.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.5e-9596.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRG QKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1DLF0 U3 small nucleolar ribonucleoprotein protein IMP32.0e-9597.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR  QKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP39.0e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRG QKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp31.4e-4849.18Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM RYHI+ R++Y+KY+ +C  F++L   L  ++  DPFRL+    LLEKL+++G++P++  + ++ ++
Subjt:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+RVGP  +TDPA+LVTR++EDF+TW D+SKIKR + +YNDKLDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

P32899 U3 small nucleolar ribonucleoprotein protein IMP31.3e-5152.78Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL
        +RKLK HEQKLLKKV+FLEWK++ GHR+ QVM  YHI  R+DY KY+ +C   ++L + L  +   DPFR +  + LL+KLY +GV+ T+  + +L +++
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+RVGP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP37.5e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R  ++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP32.6e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ L R  ++L   L+ + E+DPFR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP39.7e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R  ++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S41.3e-0630.77Show/hide
Query:  LKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITW
        L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   A+ +  +   I Q HIRVG + V  P+F+V  + +  I +
Subjt:  LKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITW

Query:  VDSS
          +S
Subjt:  VDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein2.6e-7976.8Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS LCR  QKL +++K+M+  DPFR+++T+ LLEKLYN+GVIPTR+SL L +RLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+RVGPET+TDPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

AT5G39850.1 Ribosomal protein S47.8e-0734.44Show/hide
Query:  LKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLV
        L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   A+ +  A   I Q HIRVG + V  P+F+V
Subjt:  LKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTTTTGAAAAAGGTCAACTTCTTAGAATGGAAGAGGGAAGGAGGTCACAGAGAAGCCCAAGTCATGCATCGCTATCACAT
CACAGGACGGGACGACTACAAAAAGTATTCGAGCTTGTGCCGGGGGTTTCAAAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTAA
CCGAGAAGCTCCTCGAAAAGCTGTACAATATTGGCGTGATACCAACTCGACAGAGCTTGAACTTATGTGATCGCCTGTCGGTGTCATCCTTTTGCAGACGAAGACTATCG
ACGGTGTTGGTACGTTTGAAGTTTGCGGAGCACTTGAGGGAAGCTGTTACTTACATCGAGCAAGGACACATTAGAGTTGGTCCAGAGACAGTTACCGATCCAGCATTTCT
CGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTTTTGAAAAAGGTCAACTTCTTAGAATGGAAGAGGGAAGGAGGTCACAGAGAAGCCCAAGTCATGCATCGCTATCACAT
CACAGGACGGGACGACTACAAAAAGTATTCGAGCTTGTGCCGGGGGTTTCAAAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTAA
CCGAGAAGCTCCTCGAAAAGCTGTACAATATTGGCGTGATACCAACTCGACAGAGCTTGAACTTATGTGATCGCCTGTCGGTGTCATCCTTTTGCAGACGAAGACTATCG
ACGGTGTTGGTACGTTTGAAGTTTGCGGAGCACTTGAGGGAAGCTGTTACTTACATCGAGCAAGGACACATTAGAGTTGGTCCAGAGACAGTTACCGATCCAGCATTTCT
CGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCT
GA
Protein sequenceShow/hide protein sequence
MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGFQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC